KEGG   DISEASE: Developmental delay with neuropsychiatric disorders
Entry
H02685                      Disease                                
Name
Developmental delay with neuropsychiatric disorders
  Subgroup
Developmental delay, impaired growth, dysmorphic facies, and axonal neuropathy (DIGFAN)
Developmental delay, impaired speech, and behavioral abnormalities (DDISBA)
Developmental delay, hypotonia, musculoskeletal defects, and behavioral abnormalities (DEHMBA)
Developmental delay with variable neurologic and brain abnormalities (DENBA)
Developmental delay, impaired speech, and behavioral abnormalities, with or without seizures (DEDISB)
Developmental delay, hypotonia, and impaired language (DEDHIL)
Developmental delay, behavioral abnormalities, and neuropsychiatric disorders (DEDBANP)
Developmental delay, language impairment, and ocular abnormalities (DEVLO)
Developmental delay with hypotonia, myopathy, and brain abnormalities (DEDHMB)
Diabetes, deafness, developmental delay, and short stature syndrome (DDDS)
Developmental delay with variable intellectual impairment and behavioral abnormalities (DDVIBA)
Developmental delay, intellectual disability, obesity, and dysmorphism (DIDOD)
Developmental delay with or without intellectual impairment or behavioral abnormalities (DDIB)
Developmental delay, dysmorphic facies, and brain anomalies (DEVDFB)
Description
Developmental delay with neuropsychiatric disorders is a group of neurodevelopmental disorders characterized by global developmental delay and neurologic deficits. Additional features may include speech delay, dysmorphic features, hypotonia, behavioral abnormalities, and seizures.
Category
Congenital malformation
Brite
Human diseases in ICD-11 classification [BR:br08403]
 20 Developmental anomalies
  LD90  Conditions with disorders of intellectual development as a relevant clinical feature
   H02685  Developmental delay with neuropsychiatric disorders
Pathway-based classification of diseases [BR:br08402]
 Cellular process
  nt06541  Cytoskeleton in neurons
   H02685  Developmental delay with neuropsychiatric disorders
Network
nt06541 Cytoskeleton in neurons
Gene
(DIGFAN) MORC2 [HSA:22880] [KO:K24135]
(DDISBA) SPTBN1 [HSA:6711] [KO:K06115]
(DEHMBA) SRCAP [HSA:10847] [KO:K11661]
(DENBA) LMBRD2 [HSA:92255] [KO:K28261]
(DEDISB) ARFGEF1 [HSA:10565] [KO:K18442]
(DEDHIL) FBXW7 [HSA:55294] [KO:K10260]
(DEDBANP) ADGRL1 [HSA:22859] [KO:K04592]
(DEVLO) ARPC4 [HSA:10093] [KO:K05755]
(DEDHMB) GOLGA2 [HSA:2801] [KO:K20358]
(DDDS) MANF [HSA:7873] [KO:K22556]
(DDVIBA) TCF20 [HSA:6942] [KO:K24769]
(DIDOD) PHIP [HSA:55023] [KO:K11797]
(DDIB) TAOK1 [HSA:57551] [KO:K04429]
(DEVDFB) U2AF2 [HSA:11338] [KO:K12837]
Other DBs
ICD-11: LD90.Y
OMIM: 619090 619475 619595 619694 619964 620012 620065 620141 620240 620651 618430 617991 619575 620535
Reference
PMID:32693025 (DIGFAN)
  Authors
Guillen Sacoto MJ, Tchasovnikarova IA, Torti E, Forster C, Andrew EH, Anselm I, Baranano KW, Briere LC, Cohen JS, Craigen WJ, Cytrynbaum C, Ekhilevitch N, Elrick MJ, Fatemi A, Fraser JL, Gallagher RC, Guerin A, Haynes D, High FA, Inglese CN, Kiss C, Koenig MK, Krier J, Lindstrom K, Marble M, Meddaugh H, Moran ES, Morel CF, Mu W, Muller EA 2nd, Nance J, Natowicz MR, Numis AL, Ostrem B, Pappas J, Stafstrom CE, Streff H, Sweetser DA, Szybowska M, Walker MA, Wang W, Weiss K, Weksberg R, Wheeler PG, Yoon G, Kingston RE, Juusola J
  Title
De Novo Variants in the ATPase Module of MORC2 Cause a Neurodevelopmental Disorder with Growth Retardation and Variable Craniofacial Dysmorphism.
  Journal
Am J Hum Genet 107:352-363 (2020)
DOI:10.1016/j.ajhg.2020.06.013
Reference
PMID:34211179 (DDISBA)
  Authors
Cousin MA, Creighton BA, Breau KA, Spillmann RC, Torti E, Dontu S, Tripathi S, Ajit D, Edwards RJ, Afriyie S, Bay JC, Harper KM, Beltran AA, Munoz LJ, Falcon Rodriguez L, Stankewich MC, Person RE, Si Y, Normand EA, Blevins A, May AS, Bier L, Aggarwal V, Mancini GMS, van Slegtenhorst MA, Cremer K, Becker J, Engels H, Aretz S, MacKenzie JJ, Brilstra E, van Gassen KLI, van Jaarsveld RH, Oegema R, Parsons GM, Mark P, Helbig I, McKeown SE, Stratton R, Cogne B, Isidor B, Cacheiro P, Smedley D, Firth HV, Bierhals T, Kloth K, Weiss D, Fairley C, Shieh JT, Kritzer A, Jayakar P, Kurtz-Nelson E, Bernier RA, Wang T, Eichler EE, van de Laar IMBH, McConkie-Rosell A, McDonald MT, Kemppainen J, Lanpher BC, Schultz-Rogers LE, Gunderson LB, Pichurin PN, Yoon G, Zech M, Jech R, Winkelmann J, Beltran AS, Zimmermann MT, Temple B, Moy SS, Klee EW, Tan QK, Lorenzo DN
  Title
Pathogenic SPTBN1 variants cause an autosomal dominant neurodevelopmental syndrome.
  Journal
Nat Genet 53:1006-1021 (2021)
DOI:10.1038/s41588-021-00886-z
Reference
PMID:33909990 (DEHMBA)
  Authors
Rots D, Chater-Diehl E, Dingemans AJM, Goodman SJ, Siu MT, Cytrynbaum C, Choufani S, Hoang N, Walker S, Awamleh Z, Charkow J, Meyn S, Pfundt R, Rinne T, Gardeitchik T, de Vries BBA, Deden AC, Leenders E, Kwint M, Stumpel CTRM, Stevens SJC, Vermeulen JR, van Harssel JVT, Bosch DGM, van Gassen KLI, van Binsbergen E, de Geus CM, Brackel H, Hempel M, Lessel D, Denecke J, Slavotinek A, Strober J, Crunk A, Folk L, Wentzensen IM, Yang H, Zou F, Millan F, Person R, Xie Y, Liu S, Ousager LB, Larsen M, Schultz-Rogers L, Morava E, Klee EW, Berry IR, Campbell J, Lindstrom K, Pruniski B, Neumeyer AM, Radley JA, Phornphutkul C, Schmidt B, Wilson WG, Ounap K, Reinson K, Pajusalu S, van Haeringen A, Ruivenkamp C, Cuperus R, Santos-Simarro F, Palomares-Bralo M, Pacio-Miguez M, Ritter A, Bhoj E, Tonne E, Tveten K, Cappuccio G, Brunetti-Pierri N, Rowe L, Bunn J, Saenz M, Platzer K, Mertens M, Caluseriu O, Nowaczyk MJM, Cohn RD, Kannu P, Alkhunaizi E, Chitayat D, Scherer SW, Brunner HG, Vissers LELM, Kleefstra T, Koolen DA, Weksberg R
  Title
Truncating SRCAP variants outside the Floating-Harbor syndrome locus cause a distinct neurodevelopmental disorder with a specific DNA methylation signature.
  Journal
Am J Hum Genet 108:1053-1068 (2021)
DOI:10.1016/j.ajhg.2021.04.008
Reference
PMID:32820033 (DENBA)
  Authors
Malhotra A, Ziegler A, Shu L, Perrier R, Amlie-Wolf L, Wohler E, Lygia de Macena Sobreira N, Colin E, Vanderver A, Sherbini O, Stouffs K, Scalais E, Serretti A, Barth M, Navet B, Rollier P, Xi H, Wang H, Zhang H, Perry DL, Ferrarini A, Colombo R, Pepler A, Schneider A, Tomiwa K, Okamoto N, Matsumoto N, Miyake N, Taft R, Mao X, Bonneau D
  Title
De novo missense variants in LMBRD2 are associated with developmental and motor delays, brain structure abnormalities and dysmorphic features.
  Journal
J Med Genet 58:712-716 (2021)
DOI:10.1136/jmedgenet-2020-107137
Reference
PMID:34113008 (DEDISB)
  Authors
Thomas Q, Gautier T, Marafi D, Besnard T, Willems M, Moutton S, Isidor B, Cogne B, Conrad S, Tenconi R, Iascone M, Sorlin A, Masurel A, Dabir T, Jackson A, Banka S, Delanne J, Lupski JR, Saadi NW, Alkuraya FS, Zahrani FA, Agrawal PB, England E, Madden JA, Posey JE, Burglen L, Rodriguez D, Chevarin M, Nguyen S, Mau-Them FT, Duffourd Y, Garret P, Bruel AL, Callier P, Marle N, Denomme-Pichon AS, Duplomb L, Philippe C, Thauvin-Robinet C, Govin J, Faivre L, Vitobello A
  Title
Haploinsufficiency of ARFGEF1 is associated with developmental delay, intellectual disability, and epilepsy with variable expressivity.
  Journal
Genet Med 23:1901-1911 (2021)
DOI:10.1038/s41436-021-01218-6
Reference
PMID:35395208 (DEDHIL)
  Authors
Stephenson SEM, Costain G, Blok LER, Silk MA, Nguyen TB, Dong X, Alhuzaimi DE, Dowling JJ, Walker S, Amburgey K, Hayeems RZ, Rodan LH, Schwartz MA, Picker J, Lynch SA, Gupta A, Rasmussen KJ, Schimmenti LA, Klee EW, Niu Z, Agre KE, Chilton I, Chung WK, Revah-Politi A, Au PYB, Griffith C, Racobaldo M, Raas-Rothschild A, Ben Zeev B, Barel O, Moutton S, Morice-Picard F, Carmignac V, Cornaton J, Marle N, Devinsky O, Stimach C, Wechsler SB, Hainline BE, Sapp K, Willems M, Bruel AL, Dias KR, Evans CA, Roscioli T, Sachdev R, Temple SEL, Zhu Y, Baker JJ, Scheffer IE, Gardiner FJ, Schneider AL, Muir AM, Mefford HC, Crunk A, Heise EM, Millan F, Monaghan KG, Person R, Rhodes L, Richards S, Wentzensen IM, Cogne B, Isidor B, Nizon M, Vincent M, Besnard T, Piton A, Marcelis C, Kato K, Koyama N, Ogi T, Goh ES, Richmond C, Amor DJ, Boyce JO, Morgan AT, Hildebrand MS, Kaspi A, Bahlo M, Friethriksdottir R, Katrinardottir H, Sulem P, Stefansson K, Bjornsson HT, Mandelstam S, Morleo M, Mariani M, Scala M, Accogli A, Torella A, Capra V, Wallis M, Jansen S, Weisfisz Q, de Haan H, Sadedin S, Lim SC, White SM, Ascher DB, Schenck A, Lockhart PJ, Christodoulou J, Tan TY
  Title
Germline variants in tumor suppressor FBXW7 lead to impaired ubiquitination and a neurodevelopmental syndrome.
  Journal
Am J Hum Genet 109:601-617 (2022)
DOI:10.1016/j.ajhg.2022.03.002
Reference
PMID:35907405 (DEDBANP)
  Authors
Vitobello A, Mazel B, Lelianova VG, Zangrandi A, Petitto E, Suckling J, Salpietro V, Meyer R, Elbracht M, Kurth I, Eggermann T, Benlaouer O, Lall G, Tonevitsky AG, Scott DA, Chan KM, Rosenfeld JA, Nambot S, Safraou H, Bruel AL, Denomme-Pichon AS, Tran Mau-Them F, Philippe C, Duffourd Y, Guo H, Petersen AK, Granger L, Crunk A, Bayat A, Striano P, Zara F, Scala M, Thomas Q, Delahaye A, de Sainte Agathe JM, Buratti J, Kozlov SV, Faivre L, Thauvin-Robinet C, Ushkaryov Y
  Title
ADGRL1 haploinsufficiency causes a variable spectrum of neurodevelopmental disorders in humans and alters synaptic activity and behavior in a mouse model.
  Journal
Am J Hum Genet 109:1436-1457 (2022)
DOI:10.1016/j.ajhg.2022.06.011
Reference
PMID:35047857 (DEVLO)
  Authors
Laboy Cintron D, Muir AM, Scott A, McDonald M, Monaghan KG, Santiago-Sim T, Wentzensen IM, De Luca C, Brancati F, Harris DJ, Goueli C, Stottmann R, Prada CE, Biderman Waberski M, Mefford HC
  Title
A recurrent, de novo pathogenic variant in ARPC4 disrupts actin filament formation and causes microcephaly and speech delay.
  Journal
HGG Adv 3:100072 (2022)
DOI:10.1016/j.xhgg.2021.100072
Reference
PMID:34424553 (DEDHMB)
  Authors
Kotecha U, Mistri M, Shah N, Shah PS, Gupta VA
  Title
Bi-allelic loss of function variants in GOLGA2 are associated with a complex neurological phenotype: Report of a second family.
  Journal
Clin Genet 100:748-751 (2021)
DOI:10.1111/cge.14053
Reference
PMID:32029702 (DDDS)
  Authors
Herranen A, Ikaheimo K, Lankinen T, Pakarinen E, Fritzsch B, Saarma M, Lindahl M, Pirvola U
  Title
Deficiency of the ER-stress-regulator MANF triggers progressive outer hair cell death and hearing loss.
  Journal
Cell Death Dis 11:100 (2020)
DOI:10.1038/s41419-020-2286-6
Reference
PMID:27436265 (DDVIBA)
  Authors
Schafgen J, Cremer K, Becker J, Wieland T, Zink AM, Kim S, Windheuser IC, Kreiss M, Aretz S, Strom TM, Wieczorek D, Engels H
  Title
De novo nonsense and frameshift variants of TCF20 in individuals with intellectual disability and postnatal overgrowth.
  Journal
Eur J Hum Genet 24:1739-1745 (2016)
DOI:10.1038/ejhg.2016.90
Reference
PMID:29209020 (DIDOD)
  Authors
Jansen S, Hoischen A, Coe BP, Carvill GL, Van Esch H, Bosch DGM, Andersen UA, Baker C, Bauters M, Bernier RA, van Bon BW, Claahsen-van der Grinten HL, Gecz J, Gilissen C, Grillo L, Hackett A, Kleefstra T, Koolen D, Kvarnung M, Larsen MJ, Marcelis C, McKenzie F, Monin ML, Nava C, Schuurs-Hoeijmakers JH, Pfundt R, Steehouwer M, Stevens SJC, Stumpel CT, Vansenne F, Vinci M, van de Vorst M, Vries P, Witherspoon K, Veltman JA, Brunner HG, Mefford HC, Romano C, Vissers LELM, Eichler EE, de Vries BBA
  Title
A genotype-first approach identifies an intellectual disability-overweight syndrome caused by PHIP haploinsufficiency.
  Journal
Eur J Hum Genet 26:54-63 (2018)
DOI:10.1038/s41431-017-0039-5
Reference
PMID:31230721 (DDIB)
  Authors
Dulovic-Mahlow M, Trinh J, Kandaswamy KK, Braathen GJ, Di Donato N, Rahikkala E, Beblo S, Werber M, Krajka V, Busk OL, Baumann H, Al-Sannaa NA, Hinrichs F, Affan R, Navot N, Al Balwi MA, Oprea G, Holla OL, Weiss MER, Jamra RA, Kahlert AK, Kishore S, Tveten K, Vos M, Rolfs A, Lohmann K
  Title
De Novo Variants in TAOK1 Cause Neurodevelopmental Disorders.
  Journal
Am J Hum Genet 105:213-220 (2019)
DOI:10.1016/j.ajhg.2019.05.005
Reference
PMID:34112922 (DEVDFB)
  Authors
Hiraide T, Tanaka T, Masunaga Y, Ohkubo Y, Nakashima M, Fukuda T, Ogata T, Saitsu H
  Title
Global developmental delay, systemic dysmorphism and epilepsy in a patient with a de novo U2AF2 variant.
  Journal
J Hum Genet 66:1185-1187 (2021)
DOI:10.1038/s10038-021-00948-4
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