KEGG   MODULE: M00997
Entry
M00997            Pathway   Module                                 
Name
UDP-Xyl/L-Ara biosynthesis, UDP-Glc => UDP-Xyl => UDP-L-Ala
Definition
K00012 K08678 K12448
Diagram
M00997  UDP-Xyl/L-Ara biosynthesis, UDP-Glc => UDP-Xyl => UDP-L-Ala
M00997

Class
Pathway modules; Glycan metabolism; Nucleotide sugar biosynthesis
Pathway
map00520 Amino sugar and nucleotide sugar metabolism   
map01250  Biosynthesis of nucleotide sugars
map01100  Metabolic pathways
Orthology
K00012  
UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] [RN:R00286]
K08678  
UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35] [RN:R01384]
K12448  
UXE; UDP-arabinose 4-epimerase [EC:5.1.3.5] [RN:R01473]
Complete
ath  Arabidopsis thaliana (thale cress)
aly  Arabidopsis lyrata (lyrate rockcress)
crb  Capsella rubella (pink shepherd's-purse)
csat  Camelina sativa (false flax)
eus  Eutrema salsugineum (saltwater cress)
brp  Brassica rapa (field mustard)
bna  Brassica napus (rape)
boe  Brassica oleracea (wild cabbage)
rsz  Raphanus sativus (radish)
thj  Tarenaya hassleriana (spider flower)
cpap  Carica papaya (papaya)
cit  Citrus sinensis (Valencia orange)
cic  Citrus x clementina (clementine)
pvy  Pistacia vera (pistachio)
minc  Mangifera indica (mango)
tcc  Theobroma cacao (cacao)
gra  Gossypium raimondii
ghi  Gossypium hirsutum (upland cotton)
gab  Gossypium arboreum (tree cotton)
hsyr  Hibiscus syriacus (Rose-of-Sharon)
dzi  Durio zibethinus (durian)
egr  Eucalyptus grandis (rose gum)
rarg  Rhodamnia argentea (silver malletwood)
gmx  Glycine max (soybean)
gsj  Glycine soja (wild soybean)
pvu  Phaseolus vulgaris (common bean)
vra  Vigna radiata (mung bean)
var  Vigna angularis (adzuki bean)
vun  Vigna unguiculata (cowpea)
vum  Vigna umbellata (ricebean)
ccaj  Cajanus cajan (pigeon pea)
aprc  Abrus precatorius (Indian licorice)
mtr  Medicago truncatula (barrel medic)
tpra  Trifolium pratense (red clover)
cam  Cicer arietinum (chickpea)
psat  Lathyrus oleraceus (garden pea)
vvo  Vicia villosa (hairy vetch)
lja  Lotus japonicus
adu  Arachis duranensis
aip  Arachis ipaensis
ahf  Arachis hypogaea (peanut)
lang  Lupinus angustifolius (narrow-leaved blue lupine)
pcin  Prosopis cineraria
qsa  Quillaja saponaria (soapbark tree)
fve  Fragaria vesca (woodland strawberry)
aans  Argentina anserina (silverweed cinquefoil)
rcn  Rosa chinensis (China rose)
pper  Prunus persica (peach)
pmum  Prunus mume (Japanese apricot)
pavi  Prunus avium (sweet cherry)
pdul  Prunus dulcis (almond)
mdm  Malus domestica (apple)
msyl  Malus sylvestris (European crab apple)
pxb  Pyrus x bretschneideri (Chinese white pear)
pcox  Pyrus communis (pear)
zju  Ziziphus jujuba (Chinese jujube)
mnt  Morus notabilis
csav  Cannabis sativa (hemp)
hlp  Humulus lupulus (common hop)
csv  Cucumis sativus (cucumber)
cmo  Cucumis melo (muskmelon)
bhj  Benincasa hispida (wax gourd)
mcha  Momordica charantia (bitter melon)
cmax  Cucurbita maxima (winter squash)
cmos  Cucurbita moschata (crookneck pumpkin)
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
rcu  Ricinus communis (castor bean)
mean  Mercurialis annua (annual mercury)
jcu  Jatropha curcas (Barbados nut)
hbr  Hevea brasiliensis (rubber tree)
mesc  Manihot esculenta (cassava)
pop  Populus trichocarpa (black cottonwood)
peu  Populus euphratica (Euphrates poplar)
palz  Populus alba (white poplar)
pnz  Populus nigra (Lombardy poplar)
jre  Juglans regia (English walnut)
cill  Carya illinoinensis (pecan)
cave  Corylus avellana (European hazelnut)
aglu  Alnus glutinosa (common alder)
qsu  Quercus suber (cork oak)
qlo  Quercus lobata (valley oak)
csaa  Castanea sativa (European chestnut)
twl  Tripterygium wilfordii (thunder duke vine)
vvi  Vitis vinifera (wine grape)
vri  Vitis riparia (riverbank grape)
sly  Solanum lycopersicum (tomato)
spen  Solanum pennellii
sot  Solanum tuberosum (potato)
sstn  Solanum stenotomum
sdul  Solanum dulcamara (climbing nightshade)
sver  Solanum verrucosum
cann  Capsicum annuum (peppers)
lbb  Lycium barbarum (goji berry)
nta  Nicotiana tabacum (common tobacco)
nsy  Nicotiana sylvestris (wood tobacco)
nto  Nicotiana tomentosiformis
nau  Nicotiana attenuata (coyote tobacco)
ini  Ipomoea nil (Japanese morning glory)
itr  Ipomoea triloba (trilobed morning glory)
sind  Sesamum indicum (sesame)
oeu  Olea europaea var. sylvestris (wild olive)
egt  Erythranthe guttata (spotted monkey flower)
sspl  Salvia splendens (scarlet sage)
smil  Salvia miltiorrhiza (redroot sage)
shis  Salvia hispanica (chia)
apan  Andrographis paniculata
hpum  Henckelia pumila
phua  Primulina huaijiensis
pebu  Primulina eburnea
ptab  Primulina tabacum
carb  Coffea arabica (coffee)
han  Helianthus annuus (common sunflower)
bhw  Bidens hawaiensis
ecad  Erigeron canadensis (horseweed)
lsv  Lactuca sativa (garden lettuce)
ccav  Cynara cardunculus var. scolymus (artichoke)
dcr  Daucus carota (carrot)
agrv  Apium graveolens (celery)
csin  Camellia sinensis (tea plant)
rvl  Rhododendron vialii
aew  Actinidia eriantha (wild kiwifruit)
dlt  Diospyros lotus (date-plum)
cflo  Cornus florida (flowering dogwood)
bvg  Beta vulgaris (sugar beet)
soe  Spinacia oleracea (spinach)
cqi  Chenopodium quinoa (quinoa)
calb  Chenopodium album (lamb's quarters)
atri  Amaranthus tricolor (tampala)
slaf  Silene latifolia (white campion)
mof  Malania oleifera
nnu  Nelumbo nucifera (sacred lotus)
ming  Macadamia integrifolia (macadamia nut)
tss  Telopea speciosissima (New South Wales waratah)
psom  Papaver somniferum (opium poppy)
osa  Oryza sativa japonica (Japanese rice)
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
obr  Oryza brachyantha (malo sina)
ogl  Oryza glaberrima (African rice)
bdi  Brachypodium distachyon (stiff brome)
ats  Aegilops tauschii (wheat D)
tdc  Triticum dicoccoides (wild emmer wheat)
taes  Triticum aestivum (bread wheat)
tua  Triticum urartu (red wild einkorn wheat)
hvg  Hordeum vulgare subsp. vulgare (domesticated barley)
lper  Lolium perenne (perennial ryegrass)
lrd  Lolium rigidum (rigid ryegrass)
sbi  Sorghum bicolor (sorghum)
zma  Zea mays (maize)
mflo  Miscanthus floridulus
sita  Setaria italica (foxtail millet)
svs  Setaria viridis (green foxtail)
pvir  Panicum virgatum (switchgrass)
phai  Panicum hallii (Hall's panicgrass)
paua  Phragmites australis (common reed)
tang  Typha angustifolia (narrow-leaf cattail)
crot  Carex rostrata (bottle sedge)
acss  Ananas comosus (pineapple)
pda  Phoenix dactylifera (date palm)
egu  Elaeis guineensis (African oil palm)
mus  Musa acuminata (dessert banana)
zof  Zingiber officinale (ginger)
dct  Dendrobium catenatum
peq  Phalaenopsis equestris
aof  Asparagus officinalis (garden asparagus)
msin  Magnolia sinica
acak  Aristolochia californica
ncol  Nymphaea colorata (blue-petal water lily)
atr  Amborella trichopoda
cjf  Cryptomeria japonica (Japanese cedar)
smo  Selaginella moellendorffii
ppp  Physcomitrium patens (spreading earthmoss)
cre  Chlamydomonas reinhardtii
vcn  Volvox carteri f. nagariensis
olu  Ostreococcus lucimarinus
ota  Ostreococcus tauri
bpg  Bathycoccus prasinos
mis  Micromonas commoda
mpp  Micromonas pusilla
psd  Pseudoxanthomonas spadix
xba  Ahniella affigens
alv  Allochromatium vinosum
ttp  Thermochromatium tepidum
thip  Thiohalocapsa sp. PB-PSB1
cjap  Caldichromatium japonicum
tni  Thioalkalivibrio nitratireducens
tti  Thioalkalivibrio paradoxus
bur  Burkholderia lata
bcj  Burkholderia cenocepacia J2315
bcen  Burkholderia cenocepacia DDS 22E-1
bceo  Burkholderia cenocepacia H111
bmj  Burkholderia multivorans ATCC 17616 (Tohoku)
bmu  Burkholderia multivorans ATCC 17616 (JGI)
bmk  Burkholderia multivorans DDS 15A-1
bmul  Burkholderia multivorans ATCC BAA-247
bced  Burkholderia cepacia DDS 7H-2
bcep  Burkholderia cepacia ATCC 25416
bpsl  Burkholderia pseudomultivorans
bmec  Burkholderia metallica
bstl  Burkholderia stabilis
bann  Burkholderia anthina
baen  Burkholderia aenigmatica
pbry  Paraburkholderia bryophila
fpho  Fluviibacter phosphoraccumulans
mlo  Mesorhizobium japonicum MAFF 303099
mln  Mesorhizobium loti NZP2037
mci  Mesorhizobium ciceri biovar biserrulae
mcic  Mesorhizobium ciceri CC1192
mop  Mesorhizobium opportunistum
mam  Mesorhizobium australicum
mamo  Mesorhizobium amorphae
mesw  Mesorhizobium sp. WSM1497
mesm  Mesorhizobium sp. M9A.F.Ca.ET.002.03.1.2
mesp  Mesorhizobium sp. Pch-S
mhua  Mesorhizobium huakuii
mjr  Mesorhizobium jarvisii
merd  Mesorhizobium erdmanii
moh  Mesorhizobium onobrychidis
mesj  Mesorhizobium sp. J8
mews  Mesorhizobium sp. WSM4904
mewm  Mesorhizobium sp. WSM4906
meaa  Mesorhizobium sp. AaZ16
mesx  Mesorhizobium sp. 131-2-1
pht  Phyllobacterium zundukense
sme  Sinorhizobium meliloti 1021
smk  Sinorhizobium meliloti AK83
smq  Sinorhizobium meliloti BL225C
smx  Sinorhizobium meliloti SM11
smi  Sinorhizobium meliloti Rm41
smeg  Sinorhizobium meliloti GR4
smel  Sinorhizobium meliloti 2011
smer  Sinorhizobium meliloti RMO17
smd  Sinorhizobium medicae
rhi  Sinorhizobium fredii NGR234
sfh  Sinorhizobium fredii HH103
sfd  Sinorhizobium fredii USDA 257
sino  Sinorhizobium sp. CCBAU 05631
esj  Sinorhizobium sojae
eak  Sinorhizobium alkalisoli
emx  Sinorhizobium mexicanum
enu  Sinorhizobium numidicum
egi  Sinorhizobium garamanticum
skm  Sinorhizobium kummerowiae
steg  Sinorhizobium terangae
schp  Sinorhizobium chiapasense
spre  Sinorhizobium prairiense
ead  Ensifer adhaerens OV14
eah  Ensifer adhaerens Casida A
ecaa  Ensifer canadensis
enp  Ensifer sp. PDNC004
eaw  Ensifer aridi
atu  Agrobacterium fabrum
ata  Agrobacterium tumefaciens S33
agr  Agrobacterium tumefaciens H13-3
atf  Agrobacterium tumefaciens Ach5
arai  Agrobacterium radiobacter
agt  Agrobacterium sp. 33MFTa1.1
asal  Agrobacterium salinitolerans
rir  Agrobacterium pusense IRBG74
rpus  Agrobacterium pusense CFBP5875
acuc  Agrobacterium cucumeris
aleg  Agrobacterium leguminum
agrc  Agrobacterium sp. CGMCC 11546
agrz  Agrobacterium sp. 13-2099-1-2
aars  Agrobacterium arsenijevicii
ret  Rhizobium etli CFN 42
rec  Rhizobium etli CIAT 652
rel  Rhizobium etli bv. mimosae Mim1
rep  Rhizobium etli bv. phaseoli IE4803
rei  Rhizobium etli bv. mimosae IE4771
rle  Rhizobium johnstonii
rlt  Rhizobium leguminosarum bv. trifolii WSM2304
rlg  Rhizobium leguminosarum bv. trifolii WSM1325
rlb  Rhizobium leguminosarum bv. trifolii WSM1689
rlu  Rhizobium leguminosarum bv. trifolii CB782
rhl  Rhizobium favelukesii
rga  Rhizobium gallicum bv. gallicum
rhn  Rhizobium sp. N1341
rpha  Rhizobium phaseoli
rhx  Rhizobium sp. N731
rhv  Rhizobium sp. S41
rhk  Rhizobium sp. Kim5
rez  Rhizobium esperanzae
rhr  Rhizobium sp. 11515TR
rad  Rhizobium acidisoli
roy  Rhizobium oryzihabitans
rii  Rhizobium indicum
rhid  Rhizobium hidalgonense
rbq  Rhizobium binae
rln  Rhizobium lentis
rban  Rhizobium bangladeshense
rrg  Rhizobium ruizarguesonis
raw  Rhizobium anhuiense bv. trifolii
rsul  Rhizobium sullae
rlw  Rhizobium laguerreae
rct  Rhizobium croatiense
rbw  Rhizobium brockwellii
rif  Rhizobium indigoferae
rhiz  Rhizobium sp. BT03
rhib  Rhizobium sp. AB2/73
rhia  Rhizobium sp. ACO-34A
rhiy  Rhizobium sp. Y9
rhiw  Rhizobium sp. WYJ-E13
rbin  Rhizobium binxianense
rhip  Rhizobium sp. Pop5
rhik  Rhizobium sp. K102
rhis  Rhizobium sp. SRDI969
rhic  Rhizobium sp. C104
rsop  Rhizobium sophoriradicis
npm  Neorhizobium petrolearium
avi  Allorhizobium ampelinum
rtr  Rhizobium tropici
rjg  Martinezella jaguaris
ara  Rhizobium rhizogenes K84
aro  Martinezella rhizogenes K599
bme  Brucella melitensis bv. 1 16M
bmel  Brucella melitensis bv. 1 16M
bmi  Brucella melitensis ATCC 23457
bmz  Brucella melitensis M28
bmg  Brucella melitensis M5-90
bmw  Brucella melitensis NI
bmee  Brucella melitensis bv. 3 Ether
bmf  Brucella abortus 2308
bmb  Brucella abortus bv. 1 9-941
bmc  Brucella abortus S19
baa  Brucella abortus A13334
babo  Brucella abortus bv. 2 86/8/59
babr  Brucella abortus bv. 6 870
babt  Brucella abortus 63 75
babb  Brucella abortus BDW
babu  Brucella abortus bv. 9 C68
babs  Brucella abortus BER
babc  Brucella abortus NCTC 10505
bms  Brucella suis 1330
bsi  Brucella suis 1330
bsf  Brucella suis bv. 1
bsui  Brucella suis bv. 2 Bs143CITA
bsup  Brucella suis bv. 2 PT09143
bsuv  Brucella suis bv. 2 PT09172
bsuc  Brucella suis bv. 2 Bs364CITA
bsz  Brucella suis bv. 3
bsv  Brucella suis VBI22
bsw  Brucella suis ZW043
bsg  Brucella suis ZW046
bov  Brucella ovis
bcs  Brucella canis ATCC 23365
bsk  Brucella canis HSK A52141
bol  Brucella canis Oliveri
bcar  Brucella canis RM6/66
bcas  Brucella canis SVA13
bmr  Brucella microti
bio  Brucella inopinata
bpp  Brucella pinnipedialis B2/94
bpv  Brucella pinnipedialis 6/566
bru  Brucella sp. 2002734562
brj  Brucella sp. 09RB8471
oin  Brucella intermedia
oan  Brucella anthropi ATCC 49188
oah  Brucella anthropi OAB
bpsn  Brucella pseudintermedia
bruc  Brucella sp. JSBI001
brub  Brucella sp. BO3
ocr  Ochrobactrum sp. MT180101
ocl  Ochrobactrum sp. EEELCW01
occ  Ochrobactrum sp. BTU1
och  Ochrobactrum quorumnocens
pscq  Pseudochrobactrum algeriensis
psxf  Pseudochrobactrum sp. XF203
bra  Bradyrhizobium sp. ORS 278
bro  Bradyrhizobium sp. ORS 285
brk  Bradyrhizobium sp. SK17
bdg  Bradyrhizobium daqingense
bxn  Bradyrhizobium xenonodulans
braz  Bradyrhizobium sp. C-145
braa  Bradyrhizobium sp. Ash2021
bgea  Bradyrhizobium genosp. A
bgep  Bradyrhizobium genosp. P
rhz  Rugositalea oryzae
lne  Labrys sp. KNU-23
sno  Ancylobacter novellus
mtez  Microvirga terrae
mld  Microvirga lotononidis
mtun  Methylocella tundrae
pem  Pelagibacterium flavum
noh  Nordella sp. HKS 07
acut  Acuticoccus sp. I52.16.1
astm  Asticcacaulis sp. MM231
otm  Octadecabacter temperatus
ceh  Celeribacter ethanolicus
cbak  Celeribacter baekdonensis
sinl  Sulfitobacter indolifex
sstl  Sagittula stellata
tgl  Thalassovita gelatinovora
rmai  Roseicyclus marinus
rpoh  Rhodophyticola porphyridii
rsp  Cereibacter sphaeroides 2.4.1
rsh  Cereibacter sphaeroides ATCC 17029
rsq  Cereibacter sphaeroides ATCC 17025
rsk  Cereibacter sphaeroides KD131
cazt  Cereibacter azotoformans
rsu  Rhodovulum sulfidophilum
rmb  Tritonibacter mobilis
tsco  Tritonibacter scottomollicae
thw  Thioclava nitratireducens
tec  Thioclava electrotropha
salo  Silicimonas algicola
pamo  Profundibacter amoris
sinr  Sinirhodobacter sp. HNIBRBA609
hne  Hyphomonas neptunium
npp  Novosphingobium sp. PP1Y
npn  Novosphingobium pentaromativorans
stax  Sphingomonas taxi
smy  Sphingomonas melonis
spap  Sphingomonas alpina
spso  Sphingomonas sp. So64.6b
rap  Rhodovastum atsumiense
shum  Allostella humosa
svc  Allostella vacuolata
stel  Allostella sp. ATCC 35155
ncb  Niveispirillum cyanobacteriorum
rce  Rhodospirillum centenum
mgy  Magnetospirillum gryphiswaldense MSR-1 v2
magq  Magnetospira sp. QH-2
thar  Thalassobaculum sp. OXR-137
mgm  Magnetococcus marinus
dfl  Desulfovibrio ferrophilus
delf  Desulfovibrio sp. 86
dma  Solidesulfovibrio magneticus
dcb  Solidesulfovibrio carbinolicus
das  Pseudodesulfovibrio aespoeensis
dpi  Pseudodesulfovibrio piezophilus
psel  Pseudodesulfovibrio cashew
dsx  Desulfolutivibrio sulfoxidireducens
dsd  Desulfolutivibrio sulfodismutans
doa  Desulfomicrobium orale
sfu  Syntrophobacter fumaroxidans
pbru  Pendulispora brunnea
prue  Pendulispora rubella
cya  Synechococcus sp. JA-3-3Ab
cyb  Synechococcus sp. JA-2-3B'a(2-13)
 » show all
Reaction
Compound
C00029  UDP-glucose
C00167  UDP-glucuronate
C00190  UDP-D-xylose
C00935  UDP-L-arabinose
Reference
  Authors
Harper AD, Bar-Peled M
  Title
Biosynthesis of UDP-xylose. Cloning and characterization of a novel Arabidopsis gene family, UXS, encoding soluble and putative membrane-bound UDP-glucuronic acid decarboxylase isoforms.
  Journal
Plant Physiol 130:2188-98 (2002)
DOI:10.1104/pp.009654
Reference
  Authors
Burget EG, Verma R, Molhoj M, Reiter WD
  Title
The biosynthesis of L-arabinose in plants: molecular cloning and characterization of a Golgi-localized UDP-D-xylose 4-epimerase encoded by the MUR4 gene of Arabidopsis.
  Journal
Plant Cell 15:523-31 (2003)
DOI:10.1105/tpc.008425
Reference
  Authors
Gu X, Lee SG, Bar-Peled M
  Title
Biosynthesis of UDP-xylose and UDP-arabinose in Sinorhizobium meliloti 1021: first characterization of a bacterial UDP-xylose synthase, and UDP-xylose 4-epimerase.
  Journal
Microbiology 157:260-9 (2011)
DOI:10.1099/mic.0.040758-0
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