Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446: Aaci_0683
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Entry
Aaci_0683 CDS
T00985
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
aac
Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446
Pathway
aac03030
DNA replication
aac03410
Base excision repair
aac03420
Nucleotide excision repair
aac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Aaci_0683
03410 Base excision repair
Aaci_0683
03420 Nucleotide excision repair
Aaci_0683
03430 Mismatch repair
Aaci_0683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aac03032
]
Aaci_0683
03400 DNA repair and recombination proteins [BR:
aac03400
]
Aaci_0683
Enzymes [BR:
aac01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Aaci_0683
DNA replication proteins [BR:
aac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Aaci_0683
DNA repair and recombination proteins [BR:
aac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Aaci_0683
NER (nucleotide excision repair)
GGR (global genome repair) factors
Aaci_0683
MMR (mismatch excision repair)
DNA ligase
Aaci_0683
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Aaci_0683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
DNA_ligase_ZBD
BRCT
Nlig-Ia
HHH
PTCB-BRCT
HHH_8
5_3_exonuc
HHH_3
RNA_pol_A_CTD
YCII
Zn_ribbon_RRN7
Auto_anti-p27
Zn_ribbon_NUD
Motif
Other DBs
NCBI-ProteinID:
ACV57730
UniProt:
C8WTI8
LinkDB
All DBs
Position
729827..731881
Genome browser
AA seq
684 aa
AA seq
DB search
MRVVDAKSALSLEEARARAKVLREQIEYHNRKYYLEDNPEISDAEWDALMRDLIELERKY
PELVDPASPTQRVGAPALEGFAKVVHEVPMLSLANAYSTEDLLDWDRRVRQAVGDDVRYV
CELKVDGLAVALRYQDGRLVLGATRGDGSVGEDITANIRTIRNVPLELSEPVSLEVRGEA
YMPKREFMRLNELREQQGEPLFANPRNAAAGSLRQLDPAVAASRRLGVIVYQLVRAEAHG
CETHSQALDYVARLGLPAHRERHVCANIEDVIAYIEAWADKRHELPYATDGMVVKVDSLA
LQARLGATAKSPRWAIAYKYAAEQAETTLRAIELNVGRTGVVTPTAVFDPVQLAGTTVSR
ASLHNEDLVREKDIRVGDVIVVQKAGDIIPEVIRSLPERRTEPLPEFRMPETCPQCGSRL
VRLDGEVAWRCINPDCPALLREGLIHFCSRDAMNIEGLGEQWITVLLDRGLVRTHADLYR
LRKADLVQLDRMGDKLADKLLHNIQESKRNSLERLLFGLGIRHVGEKAAKTLAEHFVTID
ALMSASEEDLMAVPDIGPKVAQSIRQYFDTPRVRQLIQELKDLGVNMTYLGPQKVSDGPL
AGKTVVLTGVLQAADRKQATAWIEQMGGKVASSVSAKTDVLIAGDKAGSKLAKAQEILRN
HPDAKLEIWDEAAFLRLVDEAGLR
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtcgtggacgccaaatcggccctgtccctggaagaagcgcgtgcgcgcgccaaa
gtgctccgggaacaaatcgaatatcacaatcgaaagtactacctggaggacaatccggag
atctccgacgcggagtgggacgcgctgatgcgggatctcatcgagcttgagcgcaagtac
ccagagctcgtcgatccggcctcgcccacgcagcgtgtgggcgccccggcgctcgaggga
ttcgccaaggtcgtgcacgaggtgcccatgctgtcgctcgcaaacgcgtattcgacggag
gatctgctcgactgggatcgccgcgtgcgacaggcggtgggcgacgacgtccgctacgtg
tgcgagctcaaggtcgacggcttggccgtggcgcttcgctaccaggacggccggctcgtg
ctcggtgcaacgcgcggcgacggatcggtcggggaggacatcacggccaacattcgcacc
attcgcaacgtgccgcttgaactttcggaacccgtgtcgctcgaggtgcgaggcgaggcg
tacatgccaaagcgcgagttcatgcggctcaacgagcttcgcgagcagcagggcgagccg
cttttcgccaatccgcgcaacgcggccgccggatcgctgcgccagctcgatccggccgtg
gccgcgagccggaggctcggcgtgatcgtgtaccagttggtgcgcgccgaggcgcacggg
tgtgagacgcacagccaggcgctggattacgtggcccgcctcggcctgcccgcgcatcgc
gagcggcacgtgtgcgcgaacatcgaggacgtgatcgcgtacatcgaggcgtgggcggac
aagcggcacgaactgccgtacgcgacggacggcatggtggtgaaggtcgactccctcgcg
ctgcaggcgcgcctcggcgccaccgcaaagagcccgcgctgggccattgcgtacaaatac
gcggcggagcaggcggagaccacgcttcgcgccatcgagttgaacgtcggccgcacgggt
gtagtcacaccgacggctgtgttcgatcccgtccagctcgcgggcaccacggtctcgagg
gcgtcgctgcacaacgaggacttggtgcgcgagaaggacatccgcgtgggcgacgtcatt
gttgtgcagaaggcgggggacatcattcccgaggtcattcgatcgctgcccgagcggcgc
accgagccgctgcccgaatttcgcatgccggagacgtgcccgcagtgcggatcgcggctc
gtgcggctcgacggcgaggtggcgtggcgctgcatcaaccccgactgcccggctctcctg
cgcgaggggctcatccacttctgttcgcgcgacgcgatgaacatcgagggcctcggcgag
cagtggatcacggtgcttctggaccgcgggttggtacggacgcacgcggatttgtatcgc
ctccgaaaggccgatctcgtccaactggaccggatgggggataagctcgcggataaactg
ttgcacaacatccaggagagcaagcggaactcgctcgagcgcctcttgtttggactcggc
atccggcacgtgggcgagaaggcggcgaagacgttggcggaacacttcgtcaccatcgac
gcgctgatgtccgcgagcgaggaggacttgatggcggtccccgacatcggccccaaagtc
gcgcagagcatccgccagtacttcgatacgccacgggtgaggcagctgattcaggagttg
aaagacctgggcgtgaacatgacctacctcggcccgcagaaggtgtcggacggcccactc
gccggaaagacggtggtattgaccggcgtgcttcaggcggcggatcgaaagcaggcgacg
gcgtggatcgagcagatgggtggcaaggtcgcctcgagtgtcagcgcgaagacggacgtg
ctcatcgcgggggacaaggcgggatcgaagctcgccaaggcgcaggagatcctgcggaat
cacccggacgcaaagctcgagatctgggatgaggcggcgtttctgcgcctggtggacgag
gcggggttgcgctga
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