Amycolatopsis acidiphila: LWP59_36615
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Entry
LWP59_36615 CDS
T07896
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
aacd
Amycolatopsis acidiphila
Pathway
aacd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aacd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LWP59_36615 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aacd03400
]
LWP59_36615 (nth)
Enzymes [BR:
aacd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LWP59_36615 (nth)
DNA repair and recombination proteins [BR:
aacd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LWP59_36615 (nth)
Prokaryotic type
LWP59_36615 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
FAA_hydrolase
Motif
Other DBs
NCBI-ProteinID:
UIJ64102
LinkDB
All DBs
Position
complement(7492382..7493065)
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AA seq
227 aa
AA seq
DB search
MLRCLAEEFPDARAELDFTNPLELLVAVVLSAQTTDVRVNEVTPAVFARYKTAADYAAAD
RAELEELLRPTGFFRAKANSILGLGAALVERYGGEVPNKLDELVTLPGVGRKTANVVLGN
AFDLPGITVDTHFGRLVRRWGWTSEEDPVKVEHAIGELIPRKDWTMLSHRVIFHGRRVCH
ARKPACGACPLAKDCPSFGAGPTEFDEAAKLVKGPERDHILAMVEHR
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgttgcctcgccgaggagtttcccgacgcgcgcgccgagctcgacttcaccaac
ccgctcgaactgctggtcgcggtggtgctttccgcgcagaccaccgacgtccgggtgaac
gaggtcacgcccgccgtgttcgcccggtacaagacggccgccgactacgccgccgccgac
cgcgcggagctggaggagctgctgcgcccgaccgggttcttccgggcgaaggcgaactcg
atcctcggcctgggcgccgcgctggtggagcgctacggcggtgaggtgccgaacaagctc
gacgagctggtcaccctgcccggcgtcggccgcaagaccgcgaacgtcgtgctcggcaac
gccttcgacctccccggcatcaccgtcgacacccacttcgggcggctcgtgcgccgctgg
ggctggacgtccgaagaggacccggtcaaggtcgagcacgccatcggcgagctgatcccg
cgcaaggactggacgatgctctcgcaccgggtgatcttccacggccgtcgcgtctgccac
gcccgcaaacccgcctgtggcgcctgcccgctggcgaaggactgcccgtcgttcggcgcc
ggcccgaccgagttcgacgaggcggcgaagctggtcaagggcccggaacgcgaccacatc
ctggcgatggtggaacaccggtga
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