Alicyclobacillus acidoterrestris: K1I37_05030
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Entry
K1I37_05030 CDS
T08106
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
aaco
Alicyclobacillus acidoterrestris
Pathway
aaco03030
DNA replication
aaco03410
Base excision repair
aaco03420
Nucleotide excision repair
aaco03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aaco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K1I37_05030 (ligA)
03410 Base excision repair
K1I37_05030 (ligA)
03420 Nucleotide excision repair
K1I37_05030 (ligA)
03430 Mismatch repair
K1I37_05030 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aaco03032
]
K1I37_05030 (ligA)
03400 DNA repair and recombination proteins [BR:
aaco03400
]
K1I37_05030 (ligA)
Enzymes [BR:
aaco01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
K1I37_05030 (ligA)
DNA replication proteins [BR:
aaco03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
K1I37_05030 (ligA)
DNA repair and recombination proteins [BR:
aaco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
K1I37_05030 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K1I37_05030 (ligA)
MMR (mismatch excision repair)
DNA ligase
K1I37_05030 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
K1I37_05030 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
DNA_ligase_ZBD
Nlig-Ia
HHH
PTCB-BRCT
RNA_pol_A_CTD
Zn_ribbon_NUD
Auto_anti-p27
BRCT_2
Zn_ribbon_Nudix
Motif
Other DBs
NCBI-ProteinID:
UNO50764
UniProt:
A0A9E6ZX46
LinkDB
All DBs
Position
1074103..1076136
Genome browser
AA seq
677 aa
AA seq
DB search
MTLDEARIRVDALRKEIEYHNQLYYREDDPSITDAEWDALMRELMALEAEFPELQSPSSP
TQRVGASVSEGFVKVEHEIPMLSLSNAYSTEELLEFDRRVRQTVGDDVQYVCELKIDGLA
VSLRYEQGRLVRGATRGDGEVGEDITSNIRTIRNVPLELTEPVTLEVRGEAYMPKQSFLR
LNEQREQQGEPLFANPRNAAAGSLRQLDPRVAASRRLGVIVYQLAQASEYPVERHSEALD
YVRRLGLPANGERKLCQDIQEVIAYIDEWAEKRRDLPYATDGMVIKVDDIRLQQELGFTA
RSPRWAIAYKYAAEQATTTLRRIDLNVGRTGAVTPTAVFDPVQLAGTTVSRASLHNEDLI
REKDIRVGDKIVVQKAGDIIPEVVKSLPEERQGDIPPFSMPRHCPQCGEPLLRLPDEAAW
RCVNPNCPALIREGLIHFVSRDAMNIEGLGEQWITILLDKNMVKTVADLYRLTKAELLTL
ERMGDKLAEKLLQSIAASKGNSLERLLFGLGIRLVGEKAAKILAQSFMTMDALAEASVNQ
LVAIPDIGPKMAESIQLYFQTPAAKALLAELKELGLNMTYLGAERVQVESVFTGKTVVLT
GTLATVDRKEASRWIEQLGGSVTSSVSAKTDFVVAGDKAGSKLEKAEALISSGKNPNLQI
LDEEAFLHVIDQAGLRA
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgaccctagatgaggcgcgcatacgcgtcgatgcgttgcgcaaagagattgagtatcac
aaccaactctattaccgcgaggatgacccgagcatcacggatgccgagtgggacgcgttg
atgcgggaattgatggcgctggaggcggaattcccggaactacagtcgccgagttcgccg
acccagcgggtgggggccagtgtatctgagggatttgtgaaagtggaacacgaaatcccc
atgctatcgctgtccaacgcctattcgacggaggagttgctcgagtttgatcgtcgggtg
cggcaaacggtaggggacgacgtgcagtatgtgtgtgagctgaaaattgatggcttggcg
gtctcccttcgctacgagcaaggccgactggtccgaggcgcgacccgcggcgacggtgaa
gttggtgaggacatcacctccaacattcgcaccatccgcaatgtcccgctggagttgacc
gaaccggtgacgttggaggttcgcggcgaggcgtatatgccgaagcagtcgtttttgcgg
ctcaatgagcagcgcgagcagcagggcgagccgctgtttgcaaatccgcgcaatgcggca
gcaggttcactgcggcagttagatccccgcgtggcggccagtcgacggttgggcgtcatc
gtttaccaattggcgcaggcttctgagtacccagttgaacgccacagcgaggcgctcgac
tatgtgcgtcggcttgggttgcctgccaatggcgagcggaagctatgccaagatattcag
gaagtcatcgcctacatcgacgagtgggcggagaaacgccgagatttaccgtatgccacg
gacggtatggtcattaaggtcgacgacattcgcctgcagcaggaactcggctttactgct
aggagtccgcgctgggcgattgcctacaaatacgcggcggaacaggcgacgacgacgctt
cgtcgcattgatttgaacgtcggccggacgggtgcggtgacgccgacggcggtgtttgat
cccgtccagttagcaggcacgacggtttctcgtgcgtcgctgcacaacgaggacctgatt
cgcgagaaggacatccgcgtcggtgataagattgtcgttcaaaaagctggcgacattatt
ccggaggtcgttaaatccctgccagaggagcgccagggggatattccgccgttttccatg
ccgcgtcattgtccgcagtgcggcgaaccgctgttgcgcttgccggatgaagccgcttgg
cgctgtgtcaatccgaattgtcccgcgctgatccgcgaggggctgattcactttgtctcg
cgcgacgcgatgaacattgagggacttggcgagcagtggatcacgattttactggacaag
aacatggtgaagacagtcgccgatttgtatcgcctgacgaaagccgagcttctgacgttg
gagcgcatgggtgacaagttggcagaaaaactcctgcagtccatcgcggcgagcaagggg
aactcacttgaacgcttgctgttcggcttaggcattcgactcgtcggcgagaaggcagcg
aagattttggcgcagtcgttcatgacgatggacgcactggctgaagcaagtgtgaatcaa
ctggtggcgattcccgatatcggcccgaagatggcggagagcatccagttgtacttccag
acgccggcggcgaaagccttgcttgctgaactcaaggaacttgggctcaacatgacgtac
cttggcgcagagcgcgtccaagtggagagcgtctttacaggcaaaacggttgtcctgact
ggaacactcgcgacggtggacagaaaagaagcttcgcgctggattgaacagttgggcggt
agcgtgacgtccagtgtgagtgccaagaccgactttgtcgtagcaggcgacaaagcgggc
agtaagttggagaaagccgaggcgctcatctcgtccggaaagaacccgaatttgcagatt
ctcgacgaggaagcatttttgcacgtgatcgatcaggctggtttgcgcgcttga
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