Anas acuta (northern pintail): 137844504
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Entry
137844504 CDS
T11380
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
aacu Anas acuta (northern pintail)
Brite
KEGG Orthology (KO) [BR:
aacu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aacu04040
]
137844504 (SCN4A)
Ion channels [BR:
aacu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
137844504 (SCN4A)
SSDB
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Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQ
GPHH
HpsJ
Motif
Other DBs
NCBI-GeneID:
137844504
NCBI-ProteinID:
XP_068517036
LinkDB
All DBs
Position
25:complement(6207620..6255112)
Genome browser
AA seq
1862 aa
AA seq
DB search
MPACSRQETAGRAQVSCEQNESMAGLPHIPGPENLRPFTPESLAAIEQRIAEAEALKIKR
QQVELPEEEELKPSSDLEAGKNLPLIYGDPPVELIGTPLEDLDPFYKDKKTFIVLNKGKS
IFRFSATPALYLLGPFHPIRRGAIKVLIHSLFSMFIMITILTNCVFMTLSNPPAWSKNVE
YTFTGIYTFESLIKILSRGFCIDDFTFLRDPWNWLDFMVISMAYITEFVDLGNISALRTF
RVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCV
RWPPLNDTLLGDFGLDNDTLANATLYSNFTDSIDSNFTSNSTFDFEAYINDEANFYFLEG
ALDALLCGNSSDAGKCPEGYECMKAGRNPNYGYTSYDTFSWAFLALFRLMTQDFWENLFQ
LTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYAEQNDATMLEAQQKEEEFQQLME
QLKKHQEEQEKQLQDRRSSSGSLRSSTAEKKSDSDLNSDQDKVKDCNGRVVPKVVLERSA
TVIEFNPGNETEKSDSNHLTVGNQDGPGLEKRVGSAISVISNAVEELEEAHQKCPPWWYK
FAHMFLVWDCCLPWLKLKEFVKLVVMDPFVDLGITICIVLNTLFMAMEHYPMTEEFENVL
TVGNLVFTGIFTAEMVLKLIALDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRS
FRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYMECV
CKISLDCTLPRWHMHDFFHSFLIVFRILCGEWIETMWDCMEVAGQTMCLIVFMMVMVIGN
LVVLNLFLALLLSSFSADSLAASDDDGEMNNLQIAIGRITRGIDFVKSSVLMLLRRLWKG
KKVAPEEEQEPSKGDNSALNHMDTGQEPKSEYMDGVTGKEYLFMDELDHMNFINNPNLTV
QVPIASEESDLYEEETSTQSDTEDATVRKNPLSSDNASSLCSTVDYKPPPPEEEAVAEEA
EESNEPEECFTEACVKRFPCLYVDITSERGKVWWNIRKTCFRIVEHDWFETFIVFMILLS
SGALAFEDIYIEQRRVIRTVLEYADKVFSYVFVIEMLLKWVAYGFKVYFTNAWCWLDFLI
VDVSIVSLTANWLGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVL
LVCLIFWLIFSIMGVNLFAGKYYRCVNTTSGELFEISVVNNKSDCMALLHTNEVRWVNVK
VNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSREIEEQPSYEINLYMYIYFVIFIIFGAF
FTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPSNKFQG
MVFDFVTKQVFDITIMILICLNMVTMMVETDDQSELKTDILYKINLVFIVIFTGECVLKM
FALRYYYFTIGWNIFDFVVVILSIAGIVLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRG
AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFAYVKKEAGIDDIFNFETFGN
SIICLFQITTSAGWDGLLSPILNSGPPDCDPELENPGSSVKGNCGNPSIGIFFFCSYIII
SFLIVVNMYIAIILENFNVATEESSEPLCEDDFEMFYETWEKFDPDATQFIAYSTLSDFV
DTLQEPLKIPKPNKIKLITMDLPMVAGDKIHCLDILFALTKEVLGDSGEMDALKATMEEK
FMAANPSKVSYEPITTTLKRKHEEVCATKIQRAFRRYLLRRSVKQASYMYRHSKDEDALR
GDAPEKEGLIATKMHEMYGNSGTDVETAPAFSLAPVPSSETQDAPGEVKVWDGKRIVKES
LV
NT seq
5589 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcctgcagccgccaagagaccgcaggccgagcgcaggtgtcctgcgagcagaat
gagagcatggccggcctgccgcacatcccgggccccgagaacctccgccccttcaccccc
gagtcgctggctgccattgagcagcgaatcgccgaggcagaggcgctcaagataaagcgg
cagcaggtggagctgcccgaggaagaggagctcaagcccagcagtgacctggaagctggc
aagaacctgcccctcatctatggtgacccccccgtggagctcatcgggacacccctggag
gacctggaccctttctacaaggataagaagactttcatagtcctcaacaaagggaagtcc
atcttccgcttctcagcgactcctgccctctacctgctgggtcctttccaccccatccgg
agaggagccatcaaagtgctcatccattcattattcagcatgttcatcatgatcacaatt
ttaaccaactgcgtgtttatgacattgagcaacccaccggcgtggtccaagaatgtggaa
tacaccttcactggaatttacacctttgagtccctcatcaagatactgtcgagaggcttc
tgcattgatgactttacattcctgcgtgacccatggaattggctggacttcatggtcatc
tccatggcctacatcactgagttcgtggacctggggaacatatctgctctcaggaccttc
cgcgtcctccgtgccttgaaaaccatcacagtgataccagggctgaagacgatcgttggg
gcgctcatccagtcagtgaagaagctctcggatgtcatgatcctcactgtcttctgcctg
agtgtctttgccctcattggcctccagctcttcatgggaaacctccggcacaagtgtgtg
cggtggccccccctcaatgacaccttgctgggggacttcgggttggacaacgacacattg
gccaatgcaacgctctacagcaacttcaccgacagtattgacagcaacttcaccagcaac
agcacgtttgattttgaggcctacatcaacgatgaagcaaatttctactttctggaggga
gcgctcgatgccctgctctgcgggaacagcagcgatgctgggaagtgccctgaggggtac
gagtgcatgaaggcagggaggaaccccaactatggctacaccagctacgacaccttcagc
tgggctttcctggcgctgttccgcctcatgacgcaggacttctgggagaacctcttccag
ctgaccctgcgtgcagcagggaaaacatacatgatcttcttcgtggtggttatatttctg
ggttccttctacctaatcaacctcatcctggcggtggtggccatggcctatgcggaacaa
aacgacgccacaatgctggaggcgcagcagaaggaggaggaatttcagcagctcatggag
cagctgaagaagcaccaggaggagcaagagaagcagttgcaggacaggcggtccagcagc
ggctccctgcgcagcagcacggccgagaagaagagcgactcggacctgaacagtgaccag
gacaaggtgaaggactgcaatgggcgagtggtccccaaggtggtgctggagcggtctgcc
acggtgattgaattcaacccaggcaatgaaacggagaaatcagactccaaccacctcact
gtgggcaaccaagatgggccaggccttgagaagagagtggggagtgccatcagtgtcatc
tccaacgccgtggaagagctggaggaggctcaccagaagtgcccaccttggtggtacaaa
tttgctcacatgttcctggtctgggactgctgccttccatggctgaagctgaaggagttt
gtcaagctggtggtgatggacccctttgtggacctgggcatcaccatctgcatcgtgctc
aacacgctcttcatggccatggagcactaccccatgacggaggagtttgagaacgtgctg
actgtggggaacctggtctttacgggaatcttcacagcagagatggtcctgaagctcatt
gcgttggacccctatgagtatttccagcagggctggaacatatttgacagcatcatcgtc
accctgagcttggtggagctgggtctggccaacgtgcaggggctctccgtgctccgctcc
ttccgcttgctgagggttttcaaactcgccaagtcctggcccaccctcaacatgctgatc
aagatcattggcaactcagtgggtgctctggggaatctcaccctggtgttggccatcatc
gtcttcatcttcgccgtggtggggatgcagctcttcgggaagagctacatggagtgcgtg
tgcaagatctccttggactgcacactgccccgctggcacatgcatgacttcttccactcc
ttcctcatcgtcttccgcatcctctgcggggagtggatcgagaccatgtgggactgcatg
gaggtggccggccagaccatgtgcctcattgtcttcatgatggtcatggtcatcgggaac
ctcgtggtcctgaacctgttcttagctttgctgctgagttccttcagtgccgatagcctg
gcagcatcggatgatgatggcgagatgaacaacttgcagattgctatcggcagaatcacc
agggggatcgactttgtaaagagctctgtcctcatgctgctccgcaggctgtggaagggg
aagaaggtggccccagaggaagagcaggagcccagcaagggggacaattctgcactgaac
cacatggacactggccaggagcccaagtcggagtacatggacggagtcactgggaaagag
tatttgttcatggatgaactggaccacatgaatttcattaacaaccccaacctgacggtg
caggttcccattgcctcggaggagtccgacctctatgaggaggagacaagcacccagtca
gacaccgaggatgccacggtgagaaagaaccccctctccagtgacaatgcctcgtccctg
tgcagcaccgtggattacaagccaccgccgccggaggaggaggcagtggcagaagaggct
gaggagagcaacgagcctgaggagtgcttcaccgaagcctgtgtgaagaggtttccctgc
ctctacgtggacatcaccagcgagagagggaaggtctggtggaacatccggaaaacctgc
ttccgcatcgttgagcacgactggttcgagaccttcattgtcttcatgatcctcctcagc
agtggggcactggcttttgaggacatctacattgaacagcgacgggtgatacgcaccgtc
ctggagtacgccgacaaggtcttctcctacgtcttcgtcatcgagatgttgctcaagtgg
gtggcctatggcttcaaggtttacttcaccaacgcgtggtgctggctggatttcctcatc
gtcgatgtttctattgtcagcctgacagcaaactggctgggatactccgagctgggagcc
atcaagtccctgcggacactgagggccctgagaccactgcgcgccctgtccagatttgaa
gggatgcgggtggtggtgaatgccttgctgggtgccatcccctccatcatgaacgttctg
ctggtctgcctcatcttctggctgatattcagcatcatgggggtgaacctctttgcgggg
aagtactaccgatgcgtaaacaccacctcgggggaactctttgaaatcagtgtggtgaac
aataagagtgactgcatggctctcctccacaccaacgaggtcagatgggtcaatgtcaag
gtcaacttcgacaacgtgggcttgggatacctgtccttgctgcaggtggcaaccttcaaa
ggctggatggacatcatgtacgctgctgtggactcacgtgagattgaagaacagccatca
tacgagatcaacctctacatgtacatctactttgtcatcttcatcatctttggtgccttt
tttaccctgaacctcttcatcggtgtcatcattgacaacttcaaccagcagaagaaaaag
tttggaggcaaagacatcttcatgacagaagagcagaagaagtactataatgccatgaag
aagctcggctccaagaaaccccagaagcccatccccaggccctcgaacaagtttcaaggg
atggtgtttgactttgttaccaagcaagtgtttgacataaccatcatgatcctgatttgt
cttaacatggtgaccatgatggtcgaaacagatgatcaaagcgagctcaaaacagacatc
ctctacaaaatcaacctggtcttcatcgtcatcttcactggagagtgtgtgctaaaaatg
ttcgccttgcgctactactacttcactatcggctggaacatatttgactttgtggtggtc
atcctctccattgcaggtattgtcctctcagacatcatagagaagtactttgtatcaccc
acactcttcagggtcatcaggctggcaaggattggccgtgtcctccgactgatccgagga
gcaaaaggtatccggactctcctgtttgctctgatgatgtccctgcctgccctcttcaac
atcggcctcctgctgttcctcgtcatgttcatctactccatctttgggatgtccaatttc
gcctacgtaaagaaagaggcagggatcgatgacatcttcaattttgaaacttttgggaac
agcatcatctgcctcttccagatcaccacatcagcaggatgggatggtctgctcagcccc
atcctcaacagtggccctcccgactgcgaccccgaactggagaaccctggcagttcagta
aaagggaactgcggcaatccatccatcggcatcttcttcttctgcagctacatcatcatt
tccttccttattgtggtgaacatgtacatcgccatcatcctggagaatttcaacgtggcc
acagaggagagcagcgagccgctctgtgaagatgattttgaaatgttttatgaaacgtgg
gagaagtttgacccagatgccacccagttcatcgcgtacagcaccttgtctgactttgtg
gacaccttgcaggagccgctcaaaattcctaagccaaacaagatcaagctgatcaccatg
gatctaccgatggttgctggggacaaaatccactgtctggatattctctttgccctgaca
aaggaagtgctgggagactcgggagagatggatgccctgaaggccaccatggaggagaag
ttcatggccgcgaacccctcgaaggtttcctatgaacccatcaccaccactctgaaaagg
aagcacgaggaagtgtgtgctacaaaaatccagagggctttccggaggtacctcctgagg
cgctcagtgaagcaggcctcctacatgtacaggcacagtaaggatgaagatgccctgaga
ggggacgcgcctgagaaggaaggtctgatcgcaaccaaaatgcatgagatgtatgggaac
agtgggacagacgtggagacagccccggcctttagccttgcacctgtgccgagctcagag
actcaagatgctcccggtgaagtgaaagtgtgggatgggaaacgcattgtgaaggagtcg
cttgtataa
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