Aquifex aeolicus: aq_633
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Entry
aq_633 CDS
T00013
Symbol
ligA
Name
(GenBank) DNA ligase (NAD dependent)
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
aae
Aquifex aeolicus
Pathway
aae03030
DNA replication
aae03410
Base excision repair
aae03420
Nucleotide excision repair
aae03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
aq_633 (ligA)
03410 Base excision repair
aq_633 (ligA)
03420 Nucleotide excision repair
aq_633 (ligA)
03430 Mismatch repair
aq_633 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aae03032
]
aq_633 (ligA)
03400 DNA repair and recombination proteins [BR:
aae03400
]
aq_633 (ligA)
Enzymes [BR:
aae01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
aq_633 (ligA)
DNA replication proteins [BR:
aae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
aq_633 (ligA)
DNA repair and recombination proteins [BR:
aae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
aq_633 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
aq_633 (ligA)
MMR (mismatch excision repair)
DNA ligase
aq_633 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
aq_633 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
Nlig-Ia
PTCB-BRCT
HHH
DUF4252
BRCT_2
Zn_ribbon_NUD
DUF6085
RNA_pol_A_CTD
zf-IS66
Motif
Other DBs
NCBI-ProteinID:
AAC06838
UniProt:
O66880
LinkDB
All DBs
Position
433166..435328
Genome browser
AA seq
720 aa
AA seq
DB search
MFTPEREKELQEKTRELLRKIKDVKVLSFEEAKKLAEDLREVIRYHDYKYYVEANPVIPD
YDYDRLFRALKEIEKKYPELITPDSPTQRVASEISGEFPTVKHYTPMLSLDNAYSEDELR
EFDRRVRQITGLEVVEYAVEPKLDGAGIALVYENDLFVRGATRGDGEYGEDITNNLKTIK
TIPLKAEFSRFGIKLAEIRGEVVIRKDEFQKLNKERMEEGLPPFANPRNAAAGSIRQKDP
KEVAKRNLEAIVYHLSYVEPPETEPPTHYESLKMLHTLGFKTLFKDTKVCKGIDEVIEYC
KEWEKKRDSYPYEIDGMVVKVNDRRLWKVLGYTSHHPRWAIAYKFKPRRAVTKLVDVVFQ
VGRTGTITPVGKLEPVELGGVTVSSVSLFNEDFIREKDIRIGDWVVVERAGDVIPYVVEV
LKEKRTGEEKPVEFPKYCPSCGSELVKLPEEVAIRCINISCPAQSVLRIKHWASRDAMDI
RGLGDATIKLLFNRGLAKDVGDLYYLKLTDILKLPGFGEKSAMNLLKAIEESKNRPLDRV
LYGLGIRYVGQTTAKKIAEIINSVWDLKDIPLEKLMRLEGIGYKVARSIKEFFNIPQNLE
VLKKLEKAGVNLAKKVKEKVADVLKGKTFVFTGTLDCCSREKAGEIVEMLGGKFSNSVTS
KTDYLVVGKDPGATKLSKAKKYGVKTITEEEFVNMIKDYVDLEKIKKEDKKEKPKIGRLF
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccccagaaagggaaaaggaacttcaggaaaaaacacgggaactcctgagaaag
attaaggacgtaaaagtcctgagctttgaggaagctaaaaaactcgcggaagacctcaga
gaagtaatcaggtatcacgattacaagtactacgtcgaggcaaacccagtaattcccgat
tacgattacgacagactcttcagggctttaaaagaaatagagaaaaaataccccgagctt
atcactcccgattctcctactcagagagtggcgagcgaaataagcggagagtttcccacg
gttaaacactacacccctatgctctctctggacaacgcctactcggaagatgaactcaga
gagtttgacaggagggtaagacagattacgggattggaagtagtagagtacgcggtagag
ccaaaactggacggtgcgggtatagctcttgtttatgaaaacgatttgttcgtcaggggg
gctacgaggggcgacggtgagtacggggaagacataacgaataacctcaaaactattaaa
acaataccactaaaggcggaattttcccgtttcggaatcaaacttgcggaaatcagggga
gaagtagttataaggaaagatgaatttcaaaaattaaataaagaaagaatggaagaagga
ttgcctccgtttgccaatcccaggaatgcggctgcaggctccattaggcagaaggatcct
aaggaagttgctaagagaaatctggaagctatcgtataccacctctcttacgtagaaccc
cctgagaccgaaccgccaacccactacgaatctttgaaaatgctccatacactcggtttc
aagacgctctttaaggacacaaaagtctgcaagggcatagacgaagttatagagtactgc
aaggagtgggagaaaaagagggactcttacccttacgagatagacggaatggtcgttaag
gtgaacgacagaaggttgtggaaggttctcggttacacttcccaccatccgaggtgggct
atagcgtataagttcaagccaaggagagcggtaacaaaactcgttgacgttgtctttcag
gtgggaaggacgggaacgattacacctgtgggtaagctcgagcctgtagagctgggaggc
gttaccgtttcttctgtatctctatttaacgaagactttataagggaaaaggacatcagg
ataggtgactgggtggtagttgagagggctggagacgttataccttacgtggttgaagtc
ttaaaggaaaagagaacgggtgaagagaaacccgtggaatttccaaagtactgtccttcc
tgcggttctgagctcgtaaaacttcccgaggaagtagctataaggtgtataaacatatcc
tgccccgctcagagcgttttgaggattaaacactgggcgagcagagacgcaatggacata
agaggactgggagacgccacaataaaacttctattcaacaggggactcgcaaaggacgtg
ggagacctttactacctaaagttgacggacattttaaagcttcctggatttggagaaaaa
tccgctatgaacttactgaaggctattgaggagagcaaaaatagacctcttgatagagtc
ctttacggactcggtataaggtacgtgggacaaactacagcaaaaaaaatagccgaaatt
ataaacagtgtatgggatttaaaagacattccccttgagaagttgatgagattggaagga
atagggtacaaggtagcaaggagtataaaggagttcttcaacatacctcaaaaccttgaa
gttcttaaaaaactggaaaaggcgggtgtaaacctcgccaagaaagtcaaagaaaaagtt
gcagacgttttgaaaggaaaaactttcgttttcacgggaacgctcgattgttgttcgagg
gaaaaggcgggggagattgttgagatgctcggcggaaagttctcaaactctgtgacttcc
aaaacagattacctagtggtgggtaaagatcccggagctacaaaactcagtaaagctaag
aagtacggagtaaagactataaccgaagaggaattcgtaaacatgataaaagattacgtg
gatttggagaaaataaagaaggaggataagaaggaaaaaccgaaaataggcagactattt
tga
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