KEGG   Aureococcus anophagefferens: AURANDRAFT_23922
Entry
AURANDRAFT_23922  CDS       T04134                                 
Name
(RefSeq) hypothetical protein
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
aaf  Aureococcus anophagefferens
Pathway
aaf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aaf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AURANDRAFT_23922
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aaf03041]
    AURANDRAFT_23922
Spliceosome [BR:aaf03041]
 Complex A
  U2 snRNP components
   U2 related factors
    AURANDRAFT_23922
 Complex B
    AURANDRAFT_23922
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    AURANDRAFT_23922
SSDB
Motif
Pfam: TUDOR MNR DUF6857 Fis1_TPR_C SMN_Tudor
Other DBs
NCBI-GeneID: 20219834
NCBI-ProteinID: XP_009035555
JGI: Auran1_23922
UniProt: F0Y5G7
LinkDB
Position
Unknown
AA seq 272 aa
AMADLAEKLATYAEQLAQVEQLLQADPSNDQFLKLRTDLLEVTKLTEDLLKYKHEQSESQ
QPSGDAGEAEGAAVDVSPFQVGMRCEGNPLDPSQIDVGFECVGRYSGDGKYYEVVVEAIT
DFGYKVQFQEYGNSEELPLEYLRPKDADGGRLDANELYREADGSWRIPDHLRVSHTDSEQ
ERLRKRRKVKALKQKDKQREKDEVRDGQKNSWLAFQSKGAKRKVAGSMKGARKGSIFASP
DTVDGRVGVTGSGAEMTEFGERKKYKIAPPLP
NT seq 819 nt   +upstreamnt  +downstreamnt
gccatggcggacctcgcggagaagctcgcgacgtacgcggagcagctcgcgcaggtcgag
cagctcctccaggcggacccgagcaacgaccagttcctgaagctgcgcacggacctgctc
gaggtgacgaagctcacggaggacctgctcaagtacaagcacgagcagagcgagtcccag
cagccgagcggcgacgcgggcgaggccgagggcgcggccgtcgacgtgagcccgttccag
gtgggcatgcggtgcgagggcaaccccctcgacccttctcagatcgacgtcggcttcgag
tgcgtcggccgctacagcggcgacggcaagtactacgaggtcgtcgtcgaggcgatcacg
gacttcgggtacaaggtccagttccaggagtacggcaacagcgaggagctgcccctcgag
tacctccggcccaaggacgcggacggcgggcgcctcgacgcgaacgaactctaccgcgag
gccgacgggtcctggcgcatcccggaccacctgcgcgtgtcccacacggacagcgagcag
gagcggctccggaagcggcgcaaggtcaaggcgctcaagcagaaggacaagcagcgcgag
aaggacgaggtccgcgacgggcagaagaactcgtggctcgcgttccagagcaagggcgcg
aagcgcaaggtcgcgggctccatgaagggcgcgcgcaagggctccatcttcgcgagcccg
gacaccgtcgacggccgcgtcggcgtcacgggctccggcgcggagatgacggagttcggc
gagcgcaagaagtacaagatcgcgccgcccctgccctag

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