Aureococcus anophagefferens: AURANDRAFT_8889
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Entry
AURANDRAFT_8889 CDS
T04134
Name
(RefSeq) hypothetical protein
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
aaf
Aureococcus anophagefferens
Pathway
aaf03420
Nucleotide excision repair
aaf04120
Ubiquitin mediated proteolysis
aaf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
AURANDRAFT_8889
04120 Ubiquitin mediated proteolysis
AURANDRAFT_8889
09124 Replication and repair
03420 Nucleotide excision repair
AURANDRAFT_8889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aaf04121
]
AURANDRAFT_8889
03400 DNA repair and recombination proteins [BR:
aaf03400
]
AURANDRAFT_8889
Enzymes [BR:
aaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
AURANDRAFT_8889
Ubiquitin system [BR:
aaf04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
AURANDRAFT_8889
Multi subunit type E3
SCF complex
Ring finger protein
AURANDRAFT_8889
Cul2 complex
AURANDRAFT_8889
Cul3 complex
AURANDRAFT_8889
Cul4 complex
AURANDRAFT_8889
Cul7 complex
AURANDRAFT_8889
Cul8 complex
AURANDRAFT_8889
Cul9 complex
AURANDRAFT_8889
DNA repair and recombination proteins [BR:
aaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
AURANDRAFT_8889
TCR (transcription coupled repair) factors
Cul4-CSA complex
AURANDRAFT_8889
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-rbx1
zf-RING_2
zf-C3HC4_2
zf-ANAPC11
zf-C3HC4
RINGv
zf-C3HC4_3
CxC4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
20229306
NCBI-ProteinID:
XP_009036670
JGI:
Auran1_8889
UniProt:
F0Y8P7
LinkDB
All DBs
Position
Unknown
AA seq
89 aa
AA seq
DB search
DKCAICRNSLNEPSFEYEANPSPINENGLSIAFGCCGHARPPGLSFRLPSRARVTHQRSA
QVFHLDCIQRWLKTRSVCPLCNKEWEFAK
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
gacaagtgcgccatctgccggaactcgctcaacgagccgtccttcgagtacgaggcgaac
ccgtcgccgatcaacgagaacggcctgtcgatcgccttcggctgctgcggccacgcgcgt
ccgccgggcctttcgttccgccttccctcgcgcgcgcgcgtgactcaccaacgctccgcg
caggtcttccacctcgactgcatccagcgctggctcaagacgcggtccgtctgccccctg
tgcaacaaggagtgggagttcgccaag
DBGET
integrated database retrieval system