Aricia agestis (brown argus): 121730072
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Entry
121730072 CDS
T09904
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
aage
Aricia agestis (brown argus)
Pathway
aage03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
aage00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
121730072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aage03400
]
121730072
Enzymes [BR:
aage01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
121730072
DNA repair and recombination proteins [BR:
aage03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
121730072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
BRCT
DNA_ligase_IV
BRCT_2
LIG3_BRCT
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
121730072
NCBI-ProteinID:
XP_041974835
LinkDB
All DBs
Position
9:14232987..14250297
Genome browser
AA seq
895 aa
AA seq
DB search
MADTNITPANEITFNEICLLFEKLYKRKKQRQEQNKILMNFVNEFRLKVAKTIGKKNTTF
YPILRLLLPQCERERNPYNLKETKLGRLLVNVLGLNKQSDVAQKLLNFRAVNSGSNDSDF
ASVAYFVLKSRIGQDASTVSVGVVNEVLHTIASAETGNKGPVLDESFSYLMKKLNAAEFK
WILRIILKDLKLSMSTQRILGAFHPDAPEFFQNCNNIQKVCEEFEDGDIRPLELGVQIGY
AICPMLSERMDVTDVHQLSPDKAYQVEDKFDGERFQMHMENGVFNYFSRKGFSYADNYGQ
TYESGLLTPYLKDCLNSNVKSVILDGEMMGWHKEKQYFGSKGYSYDIKKVTDNSSYRPCF
CVFDVLYYNGRCLIGPPEKGGVTLRDRLKVLDTVFTDVVGVIQISKRKIVKDSSEVLEGL
NTAIENQGEGIVVKDLDSYYIANKRNAGWYKIKPEYTEGAVTDLDLVIVGADEAENKRQG
RAKSFYVACLDHAEGSERWVCVGGVASGLTFDEKERVCAFLEPNWNTSKKKPPPSDIHFN
RLKPDLWILPEHSIVLQIKASELIRSTYCGAAYTLRFPRITAVRDDKPVRDVMTLDDYNR
LVANSNPVEKLCTKRINESEIEQFGVKTRRTRAAKVIQVPEQFRAVPKRDVEVTSQALRG
RKICVLSDDEDCKKIELINIIESHGGKHVENIGSDTWCSVAGQSSFRVRKLIASGQYDIA
PTSWLRSLPKSDSPCNIAPLDMLSIKKETELQLCHMYDEYGDSYTEFTDEATLRKCFQRM
DKEPPIYLTTKEKLQLDSELFGEGPNPFSYLRPCIIYSKNPLYSLLAKLRQATITDDMQY
ATHIVVPQEIDVKEMENKRQENAKIVTEDWLEACFESNKMVDEVDFLLTEDRNKR
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggccgacacaaacataacaccagcaaatgaaataacattcaatgaaatatgtttatta
tttgaaaaattgtataaaagaaaaaaacaaagacaggaacaaaataaaattttgatgaac
tttgttaatgaattcagattgaaagtagcgaaaactattggaaaaaagaatacaaccttc
tatcctatactaagactgctacttccgcagtgcgagcgcgagaggaacccttacaatcta
aaagagacgaagctagggaggctattggtgaacgtccttgggctcaacaaacagtctgac
gtagctcagaaactgttgaactttcgagctgtaaacagtggttcaaatgacagtgatttc
gcgagcgtcgcatactttgtattaaagtctagaataggccaagatgcgtcgaccgtgagt
gttggtgtagtgaatgaagtgctacacactattgcttcagccgaaacgggcaataaagga
cctgttctcgacgagtcgttcagttatctgatgaaaaagttaaacgcagcagagttcaaa
tggatactgcggataatattgaaggatttgaaactaagtatgagcacgcagcgcattttg
ggcgctttccatccggacgcaccagagttcttccaaaactgtaataatattcagaaggtg
tgcgaagagtttgaggacggtgacattaggcctttggaactgggcgtccaaatcggatac
gcgatctgtcccatgctgtccgagagaatggacgtcacggacgtacatcaactgtcgcca
gacaaagcttatcaggttgaggataaatttgatggcgaaagatttcagatgcacatggaa
aacggagtgttcaactatttctcacgcaagggtttctcgtacgccgacaactacggacag
acatacgagtcgggcttgctcacgccgtacctgaaggattgtttgaacagtaacgtcaaa
agcgtcatactcgatggagaaatgatgggatggcataaagagaagcaatatttcggatcc
aaaggttactcgtacgacatcaagaaagtaacagataactcgtcgtatcgcccctgtttc
tgcgtattcgacgtgctctactacaacggccgttgtctcatcggaccccccgagaaaggc
ggagttactctcagagatagactgaaggtactggacactgtattcaccgatgtggtcggc
gttatacagatcagtaaacggaagattgtcaaagatagttccgaagtactagaaggtctc
aatacggctatcgagaaccaaggcgagggcatcgtggtcaaagacttggactcctactac
attgccaacaaacgaaacgccggctggtataagataaaaccagagtacaccgagggcgcg
gtgacggacctcgacttggtgatagtgggcgcggacgaggcggagaacaagaggcagggc
cgcgccaagagcttctacgtcgcctgcctcgaccacgcagagggatctgaacggtgggtg
tgcgtgggtggagtcgcgtcaggtctgactttcgacgagaaggagcgagtctgcgcgttc
ctggaacccaactggaacaccagcaagaagaaacccccgccatcggatatacacttcaac
agactcaagcccgacttgtggatattgcctgaacattctattgtactccagatcaaggcg
tcagagctgatccgcagcacgtactgtggcgcggcgtacacgctgcgtttcccgcgcatc
accgccgtgcgcgacgacaaacccgtacgtgacgtcatgacgttggacgactacaacaga
cttgttgctaacagcaatccagtagagaaattatgcacgaaacgcataaacgagtcggaa
atcgagcagttcggtgtgaaaactcggcggacgcgcgcggccaaggtcatacaagttcct
gaacaattccgagcggtgccgaagagagacgtagaagtgacgtcacaggcgctgcgcgga
cgcaagatttgcgtgctctctgatgacgaagactgcaagaagattgagctgattaatatt
atagagtcccatggtggaaaacatgtggagaatattggttcggacacatggtgcagcgtg
gcaggacagtcgtctttccgtgttcggaaactgatcgcctctggccaatacgacatagcg
ccgacatcatggctcaggtctttaccaaaatcggattcaccatgcaacatagcaccccta
gacatgctctccataaagaaagagacggagctacagctgtgccatatgtacgacgagtac
ggagatagttacacggagtttaccgacgaagctacgcttaggaaatgtttccagaggatg
gataaggagccaccaatctatttgacgaccaaagagaaactacaacttgactccgagttg
tttggggaaggcccaaatccattctcatatctacgcccctgcattatttactccaagaat
cctttatacagtctcctagctaaactaagacaggctacgataaccgatgacatgcaatat
gctactcacatagttgtacctcaagaaattgatgtgaaggaaatggaaaataagagacag
gaaaacgcaaaaatagtgaccgaagactggctagaagcgtgctttgaaagtaataaaatg
gtggacgaagtagattttttactaactgaagatagaaataaacgatga
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