Glutamicibacter arilaitensis: AARI_08620
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Entry
AARI_08620 CDS
T01320
Symbol
ligA
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
aai
Glutamicibacter arilaitensis
Pathway
aai03030
DNA replication
aai03410
Base excision repair
aai03420
Nucleotide excision repair
aai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AARI_08620 (ligA)
03410 Base excision repair
AARI_08620 (ligA)
03420 Nucleotide excision repair
AARI_08620 (ligA)
03430 Mismatch repair
AARI_08620 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aai03032
]
AARI_08620 (ligA)
03400 DNA repair and recombination proteins [BR:
aai03400
]
AARI_08620 (ligA)
Enzymes [BR:
aai01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
AARI_08620 (ligA)
DNA replication proteins [BR:
aai03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AARI_08620 (ligA)
DNA repair and recombination proteins [BR:
aai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
AARI_08620 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AARI_08620 (ligA)
MMR (mismatch excision repair)
DNA ligase
AARI_08620 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AARI_08620 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
PTCB-BRCT
Nlig-Ia
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
CBT75086
LinkDB
All DBs
Position
981184..983487
Genome browser
AA seq
767 aa
AA seq
DB search
MLRWGTIEYVSEKDVAPVETTNVPPEADKTRYDQLVEQIRAHRDAYYQNDAPLVSDVEYD
ALFHELQLLEATYPILAGQDSPTQEVGGEVSAAFASVTHASRMYSLEDVFSLDELEAWLE
RAQANAERLHPQTPVRWLCEVKIDGLALNLTYRDGKLVRAATRGDGTTGEDVTHNALTIS
DIPQQLEGSGWPAEFEVRGEVFIATEDFNKFNEALIAQGKAPLANPRNAAAGSLRQKDPA
QTAKRPLRMFVHGLGRSRDFKLTEQSQAYELMRGWGLPVSPYGRVVDSRQAAKDYIAEHG
EKRHDLIHDIDGIVIKVDDLATQEQLGYTSRVPRWAVAYKYPPEEVHTKLLDIQVQVGRT
GRVTPFGVMEPVLVAGSTVARATLHNQEVVKAKNVKIGDTIILRKAGDVIPEIVGPVLPL
REGNDELRDFIMPTECPSCGQPLAPAKEGDVDIRCLNAESCPAQLTERVAYLGGRSALDI
EALGYEAAAALTSGPGEDPATLGGIILPAGPGPLKNEAELFNLKDKLEELGEVKVWREKR
VKGEGTGKFELVPYFYSKATAKKPSAPTKSTMKLLDELEKAKDNPLWRVLVALSIRHVGP
NASRAIATRYGSMDALLEVLDSGNAEAELSEIDSVGSIIAEALVDWFKVDWHREIVASWQ
AAGVKMQDEQDENITKNLEGLAIVVTGTLENYSRDTAKEAIIVRGGKATGSVSKKTDFLV
AGEAAGSKLDKAQSLGVPVLDEAGFGVLLEQGPDAAREVALAAPTEG
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
gtgctccggtggggcacaattgaatacgtgagtgaaaaagacgtagcaccagttgagacc
accaacgttccgccagaggctgataagacccgctatgatcagctggtcgagcagatccgt
gcgcaccgcgatgcgtactatcaaaacgatgctccgctggtctctgacgtggaatacgac
gcgctattccacgagctgcaactgcttgaagcaacctatcccatcctggccggccaggac
tcacccactcaagaagtcggcggtgaagtttctgcagccttcgcctcggtgacccatgcc
agccgcatgtattcgctggaagatgttttctcgcttgatgaactcgaagcttggctagaa
cgtgcccaggccaatgccgaacgactgcacccgcagacaccggtcaggtggctgtgcgag
gtcaagatcgatggactggcgctgaacctgacctatcgagatggcaagctggttcgcgca
gcgacccgtggcgatggaaccaccggtgaagatgtcacccacaatgcgctgaccatcagc
gatatcccgcagcagctggaaggttcgggatggcccgcagaattcgaggtccgcggcgaa
gttttcatcgccaccgaggacttcaacaagttcaacgaagctttgattgcccagggcaag
gcaccactggccaacccgcgcaatgccgccgcaggatccctgcgccagaaagatccagca
cagaccgccaagcgtcccttgcgcatgttcgtacatggcctaggacgcagccgcgacttc
aagctgactgagcaatcgcaggcctatgaactgatgcgtggctgggggctgcctgtttcg
ccttacggacgcgttgtggacagccgtcaggcagccaaggactacatcgccgaacacggc
gagaaacgccacgatctgatccacgatatcgacggtatcgtgatcaaggtcgatgacctg
gctacccaggaacagctgggctacacctcgcgtgttccacgctgggccgtggcctacaag
tacccgccagaggaagtgcacaccaagctgctggacatccaggtccaggtcggacgtacc
ggccgtgtcacgcccttcggcgtgatggaaccggtccttgttgccggctcaaccgttgcc
cgtgcgaccttgcacaatcaggaagtcgtcaaggccaagaacgtgaaaatcggtgacacc
atcatcctgcgcaaggctggtgacgtgatcccggaaatcgtgggcccggtacttccattg
cgtgaaggcaacgatgagctgcgcgatttcatcatgcctaccgaatgcccttcttgcggc
cagcctttggctccggccaaggaaggcgacgtggatatccgttgcctcaatgcggagtcc
tgcccggcacagctgaccgagcgcgtggcgtaccttggcggacgcagcgccctggatatc
gaggcgttgggatatgaggccgccgctgcactgaccagtggccctggcgaagaccctgcg
acgctgggcggaatcatcttgcctgccggacctggaccgctgaagaatgaagcagagctg
ttcaacctcaaggacaagctcgaagagctcggcgaggtgaaggtctggcgcgaaaagcgg
gtcaagggcgaaggcacaggaaaattcgagctggtcccgtacttctattccaaggccacc
gctaagaagccatcggcaccgaccaagagcaccatgaagctgctcgatgagttggaaaag
gccaaggacaacccgctgtggcgagtcttggtagccctgtccatacgccatgtcggcccc
aatgcctcgcgggccatcgctactcggtacggttccatggacgccttgctcgaggtgctg
gactcgggcaatgccgaagctgaactcagcgaaatcgactcagtcgggtcgattatcgct
gaagcactggtggactggttcaaggtggattggcaccgtgaaattgtcgcttcgtggcag
gccgccggggtcaagatgcaagacgagcaagacgagaacatcaccaagaacctcgaaggc
ttggctatcgtggtgaccggaacgttggaaaattactcgcgtgataccgctaaagaagcc
attattgtgcgcggaggcaaggcgaccggtagtgtctcgaagaagaccgatttcttggtc
gctggcgaagcagccggctcaaaacttgataaggcgcagtccctgggcgttccagtattg
gatgaagctggtttcggcgtcctgctggaacaaggtcctgacgcagcgcgcgaggtagca
ctcgccgcaccaacggaagggtag
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