Abyssibius alkaniclasticus: LGT41_0007255
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Entry
LGT41_0007255 CDS
T08825
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
aalk
Abyssibius alkaniclasticus
Pathway
aalk01501
beta-Lactam resistance
aalk01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
aalk00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LGT41_0007255
01503 Cationic antimicrobial peptide (CAMP) resistance
LGT41_0007255
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aalk02000
]
LGT41_0007255
01504 Antimicrobial resistance genes [BR:
aalk01504
]
LGT41_0007255
Transporters [BR:
aalk02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LGT41_0007255
Antimicrobial resistance genes [BR:
aalk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LGT41_0007255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
UPH72601
LinkDB
All DBs
Position
complement(1424117..1427257)
Genome browser
AA seq
1046 aa
AA seq
DB search
MFLTRISVNAPVFATMIMVALMVIGVYSFQRLPIEQLPDVDFPVVAVVVSYPGASPEAVE
SDIVEPIEESVNTISGIDYIESTSRAGEAMVILFFDMSVDSSTAMQDVRDRMGGLSGQFP
TNANDPLLFKFDPSELPVVSLAVSASTMSLRDLTALTEDVIEPRLSSIQGVGRATVVGGI
PRQLNVLIDPDRLTAFGVGVGEVTAALGQENQNLPAGDIEQGLEVQSIQVEGRIENAADF
LDIIVARRGGQPVRLGDVATLVDGEAEVNSLALLNGSAALAVDIVKTQGANTVGVAESIR
QAVAELMADDLPEGVIVEIVRDNAVPVEDSYYGVQNMLIEGAVLAVLIVFLFLNSWRSTV
ITGLTLPISVIGTMTVLFFLGFTLNIMTLLALSLAIGLLIDDAIVVRENIMRHLHMGKTH
RQAALDGTNEIGLAVLATTLSIVAVFLPVAFMDGIIGKFFLQFGVTVSVAVLISMFVAFT
LDPMMSSVWYDPAGDPKAARGFLGRQIGRFGDAFDRLGLRYRGLLRWSLRHRVTTLVLAL
AAFIGSFFLVPLVGAEFAPAVDNSEFQVEVETPVGSSLAYTASKIRQIDRVLRAFPEVTG
TYATINGATSSGGENAATVAVTMVSPSQRNRSPQDMTLPVRQALAQIPGIDVTIGAAGGL
GGVEAPVQINLYGDNFDRLGPLAERLVRALEAIDGLEDVSSSLDAAQPVLGVRINRDAAS
DLGVSLQQIAATLRPMLGGQDVSDWTAPDGRSFTVTVRLPADMRNDLDVLRSLPVAQSGA
TGSAGMVRLDQVAEIVQSFGPSEIRRRDLSRQVLVSANISGVTLGEVMPAVQAAIDGLDL
PYGYRASAGGDAEQLAETGAAAASALLLAVIFIYLVLASQFGSFLQPVAIMAALPLALIG
VMLGLLVGGSTLNMFSMIGFIMLMGLVVKNAILLVDNTNQQMRDHGLNIYDALVEAGSTR
FRPIIMTTLAMIFGMLPLALNLDEGSGQNAPMAHAVIGGLISSTILTLVVVPVVLTYVQS
FGRSVGRLFPNGPDHGQAPQPPTQNS
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgttcttgacccgcatcagtgtcaacgccccggtttttgcaaccatgatcatggtcgcg
ctcatggtcatcggggtctattccttccagcgcctgccgatcgaacagctgcccgatgtc
gactttccggttgtggccgttgtggtcagctaccccggtgcctcgcccgaggcggttgaa
agcgatattgtcgagccgatcgaggaatcggtgaacacgatttccggcatcgactatatc
gaaagcacctcgcgggctggcgaagcgatggtcattctgttctttgacatgagcgttgac
agctcgaccgccatgcaggatgtgcgtgacaggatgggcgggctttcgggccagttcccg
accaatgcgaatgacccgcttttgttcaagttcgacccgtcggaactgccggtcgtatcg
cttgccgtaagcgcatcgaccatgtcgctgcgcgatctgaccgcgctgaccgaagatgtg
atcgagccgcggctttcatccattcagggggtggggcgcgccaccgttgtgggcggtatt
ccgcgccagttgaacgtgctgatcgaccctgaccggctgacggcctttggcgtgggtgtg
ggcgaggtgacggcggcgcttggccaggaaaaccagaacctgcccgccggcgatattgaa
caggggctggaggtgcagtcgattcaggtggagggccggatcgagaatgccgccgacttc
cttgacatcatcgttgcgcgccggggtggccagcccgtgcggctgggtgatgttgccacg
ctggtggatggcgaggccgaggtgaacagccttgccctgctgaacggctctgcggcgctg
gccgtggatattgtaaaaacccagggcgccaacaccgtgggcgtggccgaaagcatccgg
caggccgtggcggaactgatggctgacgatctgccggaaggggtgattgttgaaatcgtg
cgcgacaatgccgtgccggtggaagacagctattacggtgtgcaaaacatgctgattgaa
ggcgcggtgctggcggtgctgatcgtgttcctgttcctcaattcgtggcgctcgaccgtg
attaccgggctgacattgccgatttcggtgatcggcacgatgacggtgctgtttttcctt
ggcttcacgctgaatatcatgacgctgctggccctgtctttggcgattggcctgctgatt
gatgatgcgattgtggtgcgcgaaaacatcatgcggcatttgcatatgggcaaaacgcac
aggcaggcggcgctggatggcaccaacgaaattggccttgccgtgctggccacgacgctg
tcgatcgtggcggtgtttctgcccgtggccttcatggacgggattatcggcaagtttttc
ctgcaattcggggtcacagtgtcggttgcggtgctgatctcgatgttcgtggccttcacg
cttgacccgatgatgtcttccgtctggtatgacccggcgggcgacccgaaagctgcgcgt
ggttttctgggccgccagatcggccgctttggcgatgcgttcgaccggctcggcctgcgc
tatcgcggcttgctgcgctggagcctgcgccaccgcgtgaccacgctcgtgttggccttg
gccgcttttatcggcagcttttttctggtgccgctggtcggggcggaatttgcacctgcg
gtcgataacagcgaatttcaggtcgaggtggaaacgcccgtcggctcgtcgctggcttat
acggccagcaaaatccgccagatcgacagggtgctgcgcgccttccccgaagtgacgggc
acctatgccacgatcaacggtgcaacctccagcggtggcgagaatgcggcaaccgtggcg
gttacaatggtcagcccgtcgcagcgcaaccgcagcccgcaagacatgaccctgccggtg
cgccaggctctggcgcaaattccggggattgatgtgactatcggcgcggctggcgggctt
ggcggcgtggaagcccccgtgcagatcaacctttatggcgacaatttcgacaggctcggc
ccgctggccgaaagactggtgcgcgcgcttgaagcgattgacggtctggaggatgtaagc
tcgtcgcttgacgcggcgcaaccggtgctgggcgtgcggatcaaccgcgatgcggcctcc
gatctgggcgtgtccctgcagcaaatcgccgccaccctgcgccccatgcttggcgggcag
gatgtgagcgactggaccgcgccggacgggcgcagctttacggtgaccgtgcgcctgccc
gccgatatgcgcaacgatctggatgtgctgcgctcgcttcccgtggcgcaaagcggggca
acgggcagtgcgggcatggtgcggctggaccaggttgccgagatcgttcaaagcttcggg
ccatccgagatccggcggcgcgatctgtcgcgccaggtgctggtaagcgccaatatttcc
ggggtgacgctgggcgaggtgatgcctgccgtgcaggcggcaatcgacgggctggacctg
ccatacggctatcgggcgagtgcgggcggcgatgccgagcagcttgccgaaaccggcgcg
gcagccgcctcggcgctgttgcttgcggtcatcttcatctatctggtgctggccagccag
ttcggcagctttttgcagcccgtcgcgatcatggccgccctgccgctggcgctgatcggg
gtcatgctggggctgcttgtcgggggctcgacgctgaacatgttctcgatgatcggcttc
atcatgctgatggggctggtcgtgaaaaacgcaattctgctggtggataacaccaaccag
cagatgcgcgaccacggcctgaacatctatgatgcgctggttgaggcaggctcaacgcgg
ttccgcccgatcatcatgaccacattggcgatgatcttcgggatgctgccactggcgctg
aaccttgatgaaggctcggggcagaacgccccaatggcacatgcggtgattggcgggctg
atctcatcaaccattctgacgctggtcgtggtgccggtggtgctgacctatgtgcaaagc
ttcgggcgcagtgttggcaggctgttccccaacgggccggaccacggccaagcgccacag
ccacccacacaaaattcctga
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