Apteryx mantelli mantelli (North Island brown kiwi): 106482797
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Entry
106482797 CDS
T04298
Symbol
THBS1
Name
(RefSeq) thrombospondin 1
KO
K16857
thrombospondin 1
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam04115
p53 signaling pathway
aam04145
Phagosome
aam04148
Efferocytosis
aam04350
TGF-beta signaling pathway
aam04510
Focal adhesion
aam04512
ECM-receptor interaction
aam04518
Integrin signaling
aam04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
106482797 (THBS1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106482797 (THBS1)
04518 Integrin signaling
106482797 (THBS1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
106482797 (THBS1)
04148 Efferocytosis
106482797 (THBS1)
09143 Cell growth and death
04115 p53 signaling pathway
106482797 (THBS1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
106482797 (THBS1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
106482797 (THBS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aam04131
]
106482797 (THBS1)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
aam00536
]
106482797 (THBS1)
Membrane trafficking [BR:
aam04131
]
Endocytosis
Phagocytosis
Opsonins
106482797 (THBS1)
Glycosaminoglycan binding proteins [BR:
aam00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106482797 (THBS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
VWC2L_2nd
cEGF
EGF_3
TSP1_ADAMTS
Laminin_G_3
TSP1_CCN
EGF
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
106482797
NCBI-ProteinID:
XP_013795878
LinkDB
All DBs
Position
Un
AA seq
1182 aa
AA seq
DB search
MAPAAVLFLLLMLSASEAKRAAESRGDDNSVFDLFELIGFIRKGAGRRAPGVHLVKGPES
SSPAYRIEDASRIPAVPDNKFQDLLDAIHAEKGFILLATLRQAKKSRGTLLTVEQKDGSG
HVFSLVSNGKAGTLDLSLSGDGKQQIVSVEDALLATGHWKNITLFVQEDRAQLYVGCEKM
ENAELDIPIQNIFTRDLASSARLRIAKGGVNDNFQGLLQNVRFVFGTTLETILRNKGCSS
STSVIITLDNPINGSSPAIRTNYIGHKTKDIQAVCGFSCDELTNMFVELQGLRSMVTTLQ
DRVRKVTEENELIAKVVQITPGVCIHNGIFHKNKEEWTIDSCTECTCQNSATICQKVSCP
LMPCSNATIPDGECCPRCWPSDYADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNRCE
GSSVQTRTCHLQECDKRFKQDGGWSHWSPWSSCSVTCGTGMITRIRLCNSPVPQLNGKPC
EGEARETKSCQKDLCPINGNWGPWSPWDACTVTCGGGLQKRSRLCNNPEPQYGGKTCIGE
AKGTQVCNKQDCPIDGCLSNPCFVGTTCTSSPDGSWKCGACPAGYHGDGVHCQDIDECKE
VPDACFVFNGVHRCENTEPGYNCLPCPPRFTGTQPFGRSVEDAMANKQVCKPRNPCTDGT
HDCNKNAKCNYLGHFSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCVANATYHCK
KDNCPNLPNSGQEDYDKDGIGDACDNDDDNDGIPDDRDNCPFIYNPQQYDYDRDDVGDRC
DNCPYNHNPDQTDTDNNGEGDACAVDIDGDGVLNEMDNCQYVYNVDQRDTDLDGVGDQCD
NCPLEHNPDQEDTDSDRIGDECDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDAC
DHDDDNDGIPDDKDNCRLVANPDQADSDGDGRGDACKDDFDQDSVPDIDDICPENVGISE
TDFRRFQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGFDEFNAVDFSGTFFI
NTERDDDYAGFVFGYQSSSRFYVVMWKQITQSYWDSTPTKAQGYSGLSIKVVNSTTGPGE
HLRNALWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGYIRVVMYEGKKIMAD
SGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRGKEDILLM
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atggcgccagcggctgttctcttcctcctcctcatgctcagtgcctctgaggccaagcgg
gccgcagagtcaaggggagatgataacagcgtgttcgatctctttgagctcatcggcttt
attcgcaagggagctgggcgccgggcacccggggtgcacctggtaaagggaccagagtcc
tccagccctgcttaccgtattgaagatgccagtcgcatcccagctgtccctgacaacaag
ttccaagacttactagatgccatccatgctgagaagggcttcatccttctggccactctc
cggcaagccaagaagagtagaggcacactgctgactgtggaacagaaagatggctctggt
catgtcttcagtctagtatccaatggcaaggcaggcaccctggacctgagcctttctggt
gatggcaagcaacaaatagtgtcagtagaggatgccttgctagctacaggacactggaag
aatatcaccctgtttgtgcaggaggaccgggctcagctctatgtggggtgtgagaagatg
gagaatgctgaacttgacatccccatccagaacatcttcactagggatctggccagcagt
gccaggctccgtattgccaaagggggagtcaatgacaacttccagggactgctgcagaat
gtgcggtttgtgtttggaacaactctggaaactatcctgaggaacaagggctgctccagc
tccactagtgtgatcattacattggacaaccccatcaatggttccagcccagctatacgc
actaattacatcggccataaaacaaaggacatccaagcagtctgtggtttttcctgtgat
gaactaacaaacatgtttgtggaactgcaagggctacggtccatggttacaacacttcaa
gatagagtgcgcaaagtgactgaggaaaatgaactgattgctaaagtggtccagatcact
cctggagtgtgcattcataatggaatcttccacaaaaataaagaagagtggactattgac
agctgcactgaatgtacttgccagaactctgccactatatgccagaaagtgtcgtgccct
ctaatgccttgttccaatgccaccattcctgatggggagtgctgccctcgatgctggcct
agtgactatgctgatgatggatggtctccttggtctgaatggacatcatgttccgtgacc
tgcgggaatgggattcaacagagagggcggtcctgtgacagtctcaataatcgctgcgaa
gggtcttctgtacaaactcgaacttgccatcttcaggagtgtgataagaggtttaaacag
gatggtggctggagccactggtcaccatggtcatcatgttctgtcacttgtggcacgggc
atgatcactagaattcgtctctgcaactctccagtaccacagctgaatggcaaaccttgt
gagggtgaagcaagagaaaccaaatcctgccagaaagatctttgcccaattaatggcaac
tggggaccgtggtctccatgggatgcttgcacagtcacgtgtggtggaggacttcaaaaa
cgtagtcgtctctgcaataatcctgagcctcagtatggtgggaagacttgcataggtgaa
gctaaagggactcaggtctgcaacaaacaggactgtccaattgatgggtgtctgtctaat
ccctgctttgtgggaaccacatgtaccagctcccctgatggctcctggaagtgtggtgcc
tgtcctgctggctaccacggtgatggtgtccactgccaagatattgatgagtgtaaagag
gttcctgatgcctgctttgtcttcaatggagtgcacaggtgtgagaatactgaacctggg
tacaactgtctgccttgtccaccacgtttcactgggacgcagccctttggccgcagtgtt
gaggatgccatggctaacaaacaggtttgcaagccacgtaatccatgcacagatggaaca
catgattgcaacaagaatgccaaatgcaattaccttggccacttcagtgaccctatgtat
cgctgtgaatgtaaaccaggctatgctggcaatggcataatctgtggagaagatactgac
ttggatggatggccaaatgagaaccttgtctgcgttgccaatgccacttaccactgtaaa
aaagacaactgccccaatctgccgaactctgggcaggaagactatgataaggatgggatt
ggtgatgcctgtgacaatgatgatgataatgatggtattcctgatgaccgggacaactgt
ccattcatctacaacccacagcagtatgactatgacagggatgacgttggtgaccgctgt
gataactgcccctacaatcacaaccctgatcagactgacacagacaacaatggagaagga
gatgcctgtgcagtggatattgatggagatggtgtccttaatgaaatggacaactgccag
tatgtctacaatgtagaccagagggatacagacttggatggcgttggagatcagtgtgac
aactgtccactagaacacaatcctgaccaggaagatactgactctgaccgcataggtgat
gaatgtgacaacaaccaggacatagatgaagatggtcaccaaaataaccttgataactgc
ccctatgtgcccaatgctaatcaagctgaccatgacaaggatggaaaaggtgatgcctgt
gaccatgatgatgacaatgatggtatccctgatgacaaagataactgcagactggttgct
aacccagatcaagctgattctgatggtgatggacgtggagatgcttgcaaagatgacttt
gaccaagacagtgtgccagacattgatgacatttgccctgaaaatgtgggcattagtgag
actgacttccgacgatttcagatgattcccctggatcccaagggaacatcccaaaatgat
cctaactgggttgttcgtcaccagggtaaagaactggttcagacagtcaactgtgatcct
ggacttgcagtgggttttgatgaattcaatgctgtggacttcagtggcacattcttcatc
aacacagaaagggatgatgattatgctggctttgtctttggctaccaatctagcagtcgt
ttctacgttgtcatgtggaagcagatcacccagtcttactgggactccacaccaaccaaa
gctcaaggctactcaggtctctccatcaaagttgtgaattccaccacaggtccaggagaa
catcttcgtaatgctctgtggcacacaggaaatactcctggccaggtgagaactttgtgg
catgaccctcgtcacataggctggaaagacttcacagcatacagatggcgtcttagccat
agaccaaagactggctacatcagagttgtaatgtatgaagggaagaaaatcatggcagac
tcaggaccaatctatgataaaacctatgctggtggtcggctaggattatttgtcttctcc
caagaaatggtgttcttttcagatcttaaatatgaatgcagaggtaaggaggacatttta
ttgatgtga
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