Apteryx mantelli mantelli (North Island brown kiwi): 106493905
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Entry
106493905 CDS
T04298
Symbol
CACNA1F
Name
(RefSeq) calcium voltage-gated channel subunit alpha1 F
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam04010
MAPK signaling pathway
aam04020
Calcium signaling pathway
aam04260
Cardiac muscle contraction
aam04261
Adrenergic signaling in cardiomyocytes
aam04270
Vascular smooth muscle contraction
aam04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
106493905 (CACNA1F)
04020 Calcium signaling pathway
106493905 (CACNA1F)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
106493905 (CACNA1F)
09153 Circulatory system
04260 Cardiac muscle contraction
106493905 (CACNA1F)
04261 Adrenergic signaling in cardiomyocytes
106493905 (CACNA1F)
04270 Vascular smooth muscle contraction
106493905 (CACNA1F)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aam04040
]
106493905 (CACNA1F)
Ion channels [BR:
aam04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
106493905 (CACNA1F)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
GPHH
Ca_chan_IQ
PKD_channel
HemY_N
Motif
Other DBs
NCBI-GeneID:
106493905
NCBI-ProteinID:
XP_013809475
UniProt:
A0A8B7JEJ4
LinkDB
All DBs
Position
Un
AA seq
1832 aa
AA seq
DB search
MPGGRRVLSGAPSAGRTTRTQRTAASTTSSGGKSRTLWISGGTSLAKGQGSGGVPRSPRA
LFCLRLNNPVRHAAISIVEWKPFDILILVTIFANCVALGVYIPFPEDDSNATNHNLEQVE
YVFLIIFTVETFLKIIAYGLVLHPNAYIRNGWNLLDFVIVIVGLFSVILEQPLPPAGLHI
VLNSIMKAMVPLLHIALLVLFVIIIYAIIGLELFIGRMHKTCFFIGSDLESEDDPSPCAF
SGHGRACVQNNTECRGRWEGPNGGITNFDNFFFAMLTVFQCITMEGWTDVLYWMQDAMGY
ELPWIYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLRGYM
DWITQAEDLEDEGDDGEHEKHRLTAEDLVGKRKPRLKWLRHASRSTDTHGNAMHATCPLP
RTPGSHVRLSPLPPAPGSLPGSETASVNTETAGDEEALPTACDRSYANKALLSLFAAEMV
LKLYALGPGRYFGSFFNRFDCFVVCGXXXXTALVERGAMEPLGISVLRCVRLLRVFKVTR
HWASLSNLVGSLLNSMKSIASLLLLLFLFIIIFALLGMQLFGGRFSFDETQTKRSTFDTF
PQALLTVFQILTGEDWNTVMYDGIMAYGGPVFPGMLVCIYFVILFICGNYILLNVFLAIA
VDNLADGDNINSRSDGKKDKAGEAEAGAGRQDVSVKVEGEPLEPEEEEEEGSEEGRCQPP
PDAKVAPIPEGSAFFLLGSTNPLRVRCHALIHHHVFTNLILVFIILSSVSLAAEDPVRAH
SPRNHVGNWGHWAHGLPQMTAFGAFLHKGSFCRNWFNLLDLLVVGVSLVSFGIHSSAISV
VKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKG
KFYSCTDEAKHTPAECKGTFIVYKDGDVAHPTVRERLWHNSDFNFDNVLAGMMALFTVST
FEGWPALLYKAIDANAEDQGPIYNYRVEISIFFIVYIIIIAFFMMNIFVGFVIITFRAQG
ESEYKNCELDKNQRQCVEYALKAQPLRRYIPKNRSQYRVWAMVNSTAFEYIMFILILLNT
IALAMQHYEQSKPFNYIMDLLNMVFTGLFTVEMVLKIIAFKPRHYFCDAWNMFDALIVVG
SVIDIAVTEVNNGGHVGESSEDSSRISITFFRLFRVMRLVKLLSKGEGIRTLLWTFVKSF
QALPYVALLIAMIFFIYAVIGMQTFGKVALQDGTQINRNNNFQTFPQAVLLLFRCATGEA
WQEIMLASLPGKRCDPESDAGPGEEFTCGSNFAIVYFISFFMLCAFLIINLFVAVIMDNF
DYLTRDWSILGPHHLDEFKRVWSEYDPAARGRIKHLDVVTLLRRIQPPLGFGKLCPHRVA
CKRLVAMNMPLNSDGTVTFNATLFALIRTSLKIKTEGNLDVANKELRAVVKKIWKRTKPK
LLDEIIPAPEEEEITVGKFYATFLIQDYFRKFRRRKERGMLGPSAGPRNERALQAGLQTL
QALGPEMRQALSCDLEGDGPPEPGDEQLTYAAPETLYDSAPSPPLRGEPPSAASPTPMEG
EEPAPLPHVAAHRHSSRRRSDGGHDPGRGPEEPGPPEDGEEPGDSSHEDAGGPAGRHRPF
GAGSAPPPAGWVGAGLREGSLPLPPRHFALLNGTLEGQQLKRRRLLPPTPTGRKPSFTIQ
CLRRQGSCEDEPIPGTYNPSGPPGPARPQGYSGSETWHLGGSSHAWAAAPARGHLLYAPL
ILVEGGLPGAGGSLPPLSRWLVGDHGPPGPLHLRPCSPGDSRGSADSLVEAVLISEGLGL
FARDPKFVAVAKREIADACDMTIDEMERDGGG
NT seq
5499 nt
NT seq
+upstream
nt +downstream
nt
atgccggggggcaggagggtgctgagcggggcgcccagtgccgggcgcaccacacggacg
cagcgcaccgctgcctccaccaccagctccggcgggaagtcccgcacgctctggatctcg
gggggcaccagcctggcaaagggccagggctcggggggggtcccgcgctccccccgtgcc
ctcttctgcctccgcctcaacaaccccgtccgccacgccgccatcagcatcgtcgagtgg
aagcccttcgacatcctcatcctcgtcaccatcttcgccaactgcgtggccctgggcgtc
tacatccccttccctgaggacgactccaacgccaccaaccacaacctggagcaggtggag
tatgtcttcctcatcatcttcacggtggagaccttcctgaagatcattgcctacgggctg
gtgctgcaccccaacgcctacatccgcaatggctggaacctgctcgactttgtcatcgtc
atcgtggggctcttcagcgtgatcctggagcagccgctgcctcctgcaggcctgcacatc
gtcctcaactccatcatgaaggctatggtgccgctgcttcacatcgccctactcgtcctt
ttcgtcatcatcatctacgccatcatcggcctcgagcttttcattggccgcatgcacaag
acctgcttcttcatcggctccgacctggagtcggaggacgacccatcgccctgcgccttc
tcggggcatggccgggcctgcgtgcagaacaacacggagtgccggggccgctgggagggc
cccaacggcggcatcaccaacttcgataacttcttcttcgccatgctcaccgtcttccag
tgcatcaccatggagggctggaccgacgtgctctactggatgcaggatgccatgggctac
gagctgccctggatttacttcgtcagcctcgtcatcttcggctccttctttgtcctcaac
ctggtgctgggggtgctgagcggggagttctccaaggagcgtgagaaggccaaggcccgc
ggcgacttccagaagctgcgggagaagcagcagctggaggaggatctccggggctacatg
gactggatcacccaggccgaggacctcgaagacgagggggacgacggggagcacgagaag
caccggctgactgccgaggacctcgtggggaagcgcaaaccccggctgaagtggctccgg
cacgccagtcgctccactgacacccatggtaatgccatgcatgccacatgccccctgccc
cggacgccggggtcccacgtgcggctctcaccgctgccccccgccccaggcagcctcccc
gggagtgagacggcctcggtgaacacggagaccgcgggggacgaggaggcgctgccgacc
gcctgcgaccgctcctacgccaacaaggcgctgctgtcgctcttcgccgccgagatggtg
ctgaagctgtacgcgctggggcccggccgctacttcggcagcttcttcaaccgcttcgac
tgcttcgtggtgtgtggnnnnnnnnnnnagacggcactggtggagcgcggcgccatggag
ccgctgggcatctccgtgctgcgctgcgtccgcctgctgcgcgtcttcaaggtcaccagg
cactgggcctcgctgagcaacctggtgggctccctgctgaactccatgaagtccattgcc
tcgctgctgctgctgctcttcctcttcatcatcatcttcgcgctgctgggcatgcagctc
tttgggggccgcttcagcttcgacgagacgcagaccaagcgcagcacctttgacaccttc
ccccaggccctgctcaccgtcttccagatcctgacgggggaggactggaacacggtgatg
tatgacgggatcatggcctacggcggccccgtcttccccggcatgctggtctgcatctac
ttcgtcatcctcttcatctgcggcaactacatcctcctcaacgtctttttggccatcgcc
gttgacaacctggcggacggcgacaacatcaactcgcgatccgatggcaagaaggacaag
gccggggaggcggaggccggtgcggggaggcaggatgtgagtgtgaaggttgaaggggag
ccgctggagcccgaggaagaggaggaggaggggagcgaagaaggtaggtgccagcccccc
ccagacgccaaggtggcgccgatccctgagggcagtgccttcttcctgctgggcagcacc
aacccgctgcgggtgcggtgccacgcgctcatccaccaccacgtcttcaccaacctcatc
ctcgtcttcatcatcctcagcagtgtctcgttggccgccgaggaccccgtgcgggcccac
tcgccccgcaaccacgtgggcaactggggccactgggctcacggcctgccccagatgaca
gccttcggcgccttcctgcacaagggctccttctgccgcaactggttcaacctcctcgac
ctgctggtggtcggcgtctcccttgtctcctttggcatccactccagcgccatctcagtg
gtgaagatcctgcgggtgctacgcgtcctccggcccctgcgagccatcaaccgggccaag
ggcctcaagcacgtggtgcagtgcgtcttcgtggccatccgcaccatcggcaacatcatg
atcgtgacaacactgctgcagttcatgtttgcctgcatcggggtccagctcttcaagggc
aagttctacagctgcaccgacgaggccaagcacacgcctgcagagtgcaagggcacgttc
atcgtgtacaaggacggggacgtggcgcaccccacggtgcgcgagcgcctctggcacaac
agcgacttcaacttcgacaacgtgctggccggcatgatggcgctcttcaccgtctccacc
ttcgagggctggcctgcgctgctgtacaaggcgatcgatgccaatgcagaggaccaaggt
cccatctacaactatcgagtcgagatctccatcttcttcatcgtctacatcatcatcatc
gcctttttcatgatgaacatcttcgtgggctttgtcatcatcaccttccgtgcccagggc
gagagcgagtacaagaactgtgagctggacaagaaccagcggcagtgcgtcgagtatgcg
ctgaaggcacagccactgcggcgctacatccccaagaaccgcagccagtaccgggtgtgg
gccatggtgaactccaccgccttcgagtacatcatgttcatcctcatcctgctcaacacc
attgccctggccatgcagcactacgagcagtcgaagccgttcaattacatcatggacctg
ctcaacatggtgttcacggggctgttcaccgtcgagatggtgctcaagatcatcgccttc
aagcccaggcactacttctgcgacgcctggaacatgttcgatgccctcatcgtggtgggc
agcgtgatcgacatcgccgtcaccgaggtcaacaatgggggtcacgttggtgagagctcg
gaggacagctcccgcatctccatcaccttcttccggctcttccgggtgatgcggctggtg
aagctgctgtcaaagggcgagggcatccgcaccctgctctggaccttcgtcaagtccttc
caggccctgccctacgtcgccctcctcatcgccatgatcttcttcatctatgcggtcatc
ggcatgcagaccttcgggaaggtggcactgcaggacgggacccagatcaaccgcaacaac
aacttccagaccttcccccaggccgtgctgctgctcttcaggtgcgccacgggggaggcc
tggcaggagatcatgctggccagcctgccggggaagcgctgcgaccccgagtcggacgcc
ggccccggcgaggagttcacctgcggcagcaacttcgccatcgtctacttcatcagcttc
ttcatgctctgcgccttcctgatcatcaacctcttcgtggccgtcatcatggacaacttc
gactacctcacgcgggactggtccatcctcggcccccaccacctcgacgagttcaagcgc
gtctggtctgagtacgaccccgctgccaggggccgcatcaaacacctggacgtggtgacg
ctcctgcgccggatccagcccccgctcggcttcgggaagctctgcccccaccgcgtggcc
tgcaagcgcctggtggccatgaacatgcccctgaactcggacgggaccgtgaccttcaat
gcgaccctcttcgccctcatccgcacctccctcaagatcaaaactgaagggaacctggac
gtggccaacaaggagctccgcgccgtggtcaagaaaatctggaagaggacaaaacccaag
cttctggatgagatcatcccagcaccggaggaggaggagatcaccgtggggaagttctat
gccaccttcctgattcaggactatttccgcaagttccggcggcgtaaggagcgggggatg
ctgggccccagtgccggcccccgcaacgagcgcgccctccaggctgggctgcagaccctg
caggcgctgggccccgagatgcgccaggcgttgagctgcgacctggagggcgacggtccc
cccgagcctggcgacgagcagctgacctatgcggcccctgagaccctgtacgactctgcc
cccagccccccgctccggggggagcccccctcggctgccagccccacccccatggagggg
gaggagcctgcgcccctcccccacgtggccgcacaccgccacagcagcaggcggcgctca
gacgggggccacgaccctggcagggggccggaggaaccggggccccccgaggatggggag
gagccaggggacagcagccatgaggacgccgggggcccagccggccgccacaggccgttc
ggggccggctctgcccccccacctgctggctgggtgggggcggggctgcgggaggggtcg
ctgcccctccccccccggcacttcgccctcctcaacgggaccctggaagggcaacagctc
aagcggcgccgcctcctgccccccacgcccacaggccggaagccctccttcaccatccag
tgcctgcggcgccagggcagctgcgaggacgagcccatcccggggacctacaacccctca
gggccgcccggccctgctcggccccagggctacagcggctccgagacgtggcacctgggc
ggctcctcacacgcctgggcagcggcaccggcccggggccacctgctctacgcgcccctg
atcctggtggagggggggctgccaggagcgggcgggagcctccccccactctcacggtgg
ctcgtgggggaccacggcccccctgggcccctccatctgcggccctgcagccctggggac
agccgcggctctgccgacagcctcgtcgaggcggtgctcatctcggaggggctggggctc
ttcgcacgggaccccaagtttgtggccgtggccaagcgggagattgccgacgcctgcgac
atgaccatagacgagatggagagagatggaggaggttga
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integrated database retrieval system
