Arvicola amphibius (Eurasian water vole): 119800749
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Entry
119800749 CDS
T08327
Symbol
Setdb1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp00310
Lysine degradation
aamp01100
Metabolic pathways
aamp04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
119800749 (Setdb1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
119800749 (Setdb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aamp03036
]
119800749 (Setdb1)
Enzymes [BR:
aamp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
119800749 (Setdb1)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
119800749 (Setdb1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
119800749 (Setdb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5604
Tudor_4
MBD
SET
Tudor_5
Pre-SET
Chromo_MORC2_6th
DUF4537
53-BP1_Tudor
Motif
Other DBs
NCBI-GeneID:
119800749
NCBI-ProteinID:
XP_038166896
LinkDB
All DBs
Position
14:complement(6437332..6471723)
Genome browser
AA seq
1279 aa
AA seq
DB search
MSSLPGCISLDAATAAADSDDIAELQQAVVEELGISMEELRHLIDEELEKMDCIQQRKKQ
LAELETLVLQKESEVAYVDQVYDDVSRAVINCESLVKDFYSKLGLQYHDSSSEDESSQPT
EIIEIPDEDDDVLSIDSGDAGSRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSSSQDL
HKGTLGQMSGELSKDGDLIVNMRILGKKRTKTWHKGTLIAIQTVGLGKKYKVKFDNKGKS
LLSGNHIAYDYHPPADKLFVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDG
YASYVTQSELYPICRPLKKTWEDIEDNSCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVKILFLDDKRCEWIYRGSTRLEPMFSMKTSSASALEKKQGGQLRTR
PNMGAVRSKGPVVQYTQDLTGTGTQFKPLEPPQPIAPPAPPVAPPLSPQAGDTESLESQL
AQSRKQVAKKSTSFRPGSVGSGHSSPTSPTLSENVPAGKLGINQTYRSPLASVTSAPAPA
APPAFHGMLERAPAEPSYRAPMEKLFYLPHVCSHTCLSRVRPMRNEQYRGKNPLLVPLLY
DFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETGCDFLFLEMFCLDPYVLV
DRKFQPFKPFYYILDITYGKEDVPLSCVNEIDTTPPPQVAYSKERIPGKGVFINTGPEFL
VGCDCKDGCRDKSKCSCHQLTIQATACTPGGQINPNSGYQYKRLDECLPTGVYECNKRCN
CDPNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFADKEG
LEMGDEYFANLDHIESVENFKEGYESDVGNSSDSSGVDMKDQEDGNSGSEDPEESNDDSS
DDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSEMASKDSRPPDLGPPHAPIPPSVSVG
GCKPPSSEETPKNKVASWLSCNSVSEGGFADSDSRSSFKTSEGGGGRGEAEKASTSGLSF
KDEGDNKQTKKEGPDDRNKMSVVTEGSQNYGHNLPVKSEGLRRPSSKTSVPQSRRLVAST
QSNPDDILTLSSSTESEGESATSRKPTAGQTSATAVDSDDIQTISSGSEGDDFEDKKTSS
GTAKRQVAVKSTRGFALKSTHGIAIKSTNMASVDKGESAPVRKNTRQFYDGEESCYIIDA
KLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSV
EGKELLCCCGAIECRGRLL
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccctccctgggtgcattagcttggatgcagcaacagctgcagctgactctgat
gacattgctgaactgcagcaggcagtggttgaggagctgggtatctctatggaggaactt
cgtcatttaattgatgaagaactggagaagatggactgtatacagcagcgcaagaagcag
ctcgcagagctggagacgttggtgctgcagaaggagtctgaggtggcttatgttgaccag
gtatatgatgatgtgtccagggcagtgattaactgtgagtctctggtgaaggatttctac
tctaagctgggactgcagtatcatgacagtagctccgaggatgaatcttcccagcctaca
gaaataattgagatccctgatgaagatgatgatgtcctcagtattgattcaggtgatgct
gggagcagaactccaaaagaccagaagctccgtgaagctatggctgccttaagaaaatca
gctcaagatgtccaaaagttcatggatgctgtcaacaagaaaagcagttcccaggatctg
cacaaaggaaccttgggtcagatgtctggagaactgagcaaagatggggacctgatagtc
aacatgcgaattctgggcaagaagaggaccaagacatggcacaaaggcacccttattgcc
atccagactgttgggctaggaaagaaatacaaagtgaagtttgacaacaaaggaaagagt
ctgctgtctggcaaccacatcgcctacgattaccaccctcctgccgacaagctgttcgtg
ggcagtcgagtggtggccaaatacaaagatggaaatcaggtctggctttatgctggcatt
gtagctgagacccccaacgtcaagaacaagctcagatttctgattttctttgatgatggt
tatgcttcctatgtcactcagtcagaactgtatcccatttgtcgaccactgaaaaagaca
tgggaagacatagaagacaactcctgccgagacttcatagaggaatatatcactgcctat
ccaaaccgccccatggtacttctcaagagtggccaacttattaagacggagtgggaaggc
acgtggtggaagtctcgagttgaagaggtggatggcagcctggtcaagatcctctttctg
gatgacaaaagatgtgagtggatctatcgaggctctacacgcctggaacccatgttcagt
atgaagacatcatcagcctctgcactggagaagaagcaagggggacaactcagaacccgt
cctaatatgggtgctgtgaggagcaaaggtcctgttgttcagtatacacaggacctaact
ggcactggaacccagttcaagcccctggagcccccacagcccatagctccacctgcccca
cctgttgcccctcctctttccccacaagcaggtgacactgaaagcttagaaagccaactt
gctcagtcacggaagcaagtggccaaaaagagcacgtcatttcggccaggatctgtgggc
tctggtcattcctcccctacttcgcccacactcagtgaaaatgtacctgctgggaaactt
gggattaaccagacatacagatcgcctttggcctcagtaacatctgccccagcacctgca
gctcctcctgccttccatgggatgttagagcgggcaccggctgagccttcctaccgagcc
cccatggagaagcttttctacttacctcatgtctgcagtcacacttgtctgtcccgggtc
agacccatgaggaatgaacagtaccggggcaagaaccccctgttagtaccgctactgtat
gactttcggaggatgacggcccggcgaagagttaaccgcaagatgggctttcacgttatc
tataagacaccctgtggtctctgccttcggacaatgcaggagatagaacgctaccttttt
gagactggctgtgacttcctattcctggagatgttctgtttggatccatatgttcttgtc
gacagaaagtttcagccctttaaacctttttactatattttggacatcacctatggcaag
gaagatgttcctctgtcctgtgttaatgagattgacacaactcccccaccccaggtggcc
tacagcaaggagcgcatccccggcaagggtgttttcattaacacaggccctgaattcctg
gtcggctgtgactgcaaggatgggtgtcgggataaatccaaatgttcctgccatcagcta
actatccaagccacagcatgcaccccagggggtcagatcaaccctaactctggttaccaa
tacaaaagattagacgaatgtctgcccacaggggtttatgagtgtaacaaacgctgcaac
tgtgatccaaacatgtgcacaaatcggttggtgcagcatggactacaggttcgactacag
ctatttaagacacagaacaagggctggggtatccgctgcttggatgacattgccaaaggc
tcttttgtctgtatctatgcaggcaaaatcctgacagatgactttgcagacaaagaaggc
ctggagatgggtgatgagtactttgcaaatctggaccacattgaaagtgtggagaacttt
aaggaaggatatgagagtgatgtcggcaattcctctgacagcagtggggtggacatgaag
gaccaggaagatggcaacagtggttcagaggaccctgaggaatccaatgacgacagctct
gatgataacttctgtaaggatgaggacttcagcaccagttcagtgtggcgtagctatgct
acccgaagacagacccggggtcagaaggagaatggactgtctgagatggcttccaaggat
tcccgccccccagaccttgggcctccacatgctcctatacctccctcagtatctgtaggg
ggctgcaaaccaccttcatctgaggagactcccaagaacaaggtggcctcatggctgagc
tgcaacagtgtcagtgaaggtggatttgccgactccgacagccgttcctccttcaagact
agtgaaggtgggggaggccgcggagaggctgagaaggcctctacctcaggattgagcttc
aaggatgaaggagacaataagcagactaagaaagagggcccggatgaccggaacaagatg
tcagtagttactgaaggctctcagaattatggacacaatcttcctgtgaagtctgaaggg
cttcgccgaccatctagtaaaacttctgtgccccaaagccgacgacttgtggcttccact
cagtcaaaccctgatgacatcctgacactgtccagcagcacagagagcgagggggagagt
gcgaccagccgaaagcccactgctggccagacttcagccaccgccgttgacagtgacgac
atccagaccatctcttctggctctgaaggcgatgactttgaggacaagaagacctcgtcc
ggtacagcaaagcgccaggtggcagtaaaatcaacccgaggttttgctcttaaatcaacc
catgggattgctattaaatcaactaacatggcttctgtggacaagggggagagcgcacca
gttcgtaagaacacacgccagttctacgatggtgaagagtcttgctacatcattgacgcc
aaacttgaaggcaacctaggccgctacctcaatcacagttgcagccccaacttgtttgtc
cagaacgtcttcgtggatactcatgatcttcgcttcccctgggtggccttttttgccagc
aagagaatccgggctggaacagaacttacttgggactacaactacgaagtgggcagcgtg
gaaggcaaggagctgctgtgctgctgcggagccattgaatgcagagggcgtctcctgtaa
DBGET
integrated database retrieval system
