Arvicola amphibius (Eurasian water vole): 119803346
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Entry
119803346 CDS
T08327
Symbol
Apaf1
Name
(RefSeq) apoptotic protease-activating factor 1
KO
K02084
apoptotic protease-activating factor
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp01524
Platinum drug resistance
aamp04115
p53 signaling pathway
aamp04210
Apoptosis
aamp04215
Apoptosis - multiple species
aamp05010
Alzheimer disease
aamp05012
Parkinson disease
aamp05014
Amyotrophic lateral sclerosis
aamp05016
Huntington disease
aamp05020
Prion disease
aamp05022
Pathways of neurodegeneration - multiple diseases
aamp05134
Legionellosis
aamp05152
Tuberculosis
aamp05160
Hepatitis C
aamp05161
Hepatitis B
aamp05162
Measles
aamp05164
Influenza A
aamp05168
Herpes simplex virus 1 infection
aamp05169
Epstein-Barr virus infection
aamp05200
Pathways in cancer
aamp05222
Small cell lung cancer
aamp05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
119803346 (Apaf1)
04215 Apoptosis - multiple species
119803346 (Apaf1)
04115 p53 signaling pathway
119803346 (Apaf1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
119803346 (Apaf1)
09162 Cancer: specific types
05222 Small cell lung cancer
119803346 (Apaf1)
09172 Infectious disease: viral
05161 Hepatitis B
119803346 (Apaf1)
05160 Hepatitis C
119803346 (Apaf1)
05164 Influenza A
119803346 (Apaf1)
05162 Measles
119803346 (Apaf1)
05168 Herpes simplex virus 1 infection
119803346 (Apaf1)
05169 Epstein-Barr virus infection
119803346 (Apaf1)
09171 Infectious disease: bacterial
05134 Legionellosis
119803346 (Apaf1)
05152 Tuberculosis
119803346 (Apaf1)
09164 Neurodegenerative disease
05010 Alzheimer disease
119803346 (Apaf1)
05012 Parkinson disease
119803346 (Apaf1)
05014 Amyotrophic lateral sclerosis
119803346 (Apaf1)
05016 Huntington disease
119803346 (Apaf1)
05020 Prion disease
119803346 (Apaf1)
05022 Pathways of neurodegeneration - multiple diseases
119803346 (Apaf1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
119803346 (Apaf1)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
119803346 (Apaf1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40
WD40_WDHD1_1st
WD40_Prp19
APAF1_C
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
NB-ARC
WHD_APAF1
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
CARD
Beta-prop_NOL10_N
Beta-prop_EIPR1
Beta-prop_RIG_2nd
NBCH_WD40
CFAP251_N
Beta-prop_WDR41
Beta-prop_TEP1_C
DSE1_N
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
ASA1
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
WD40_like
WD40_RFWD3
PEP5_VPS11_N
Beta-prop_WDR75_2nd
Beta-prop_WDR11_2nd
Ge1_WD40
Beta-prop_NUP159_NUP214
Beta-prop_DCAF4
Beta-prop_NWD2_C
TRM82_WD
PAC11
Beta-prop_SPT8
CARD_2
Beta-prop_Nup120_160
Beta-prop_ACSF4
AAA_16
Beta-prop_DCAF12
Beta-prop_RSE1_2nd
AAA_22
NPHP3_N
NACHT
nSTAND6
ATPase_2
Motif
Other DBs
NCBI-GeneID:
119803346
NCBI-ProteinID:
XP_038170517
LinkDB
All DBs
Position
17:complement(7122056..7200521)
Genome browser
AA seq
1249 aa
AA seq
DB search
MDAKARNCLLQHREALEKDIKTSYIMDHMISDNVLTVVEEEKVRSQTTQYQRAAALITMI
LHKDNCAYVSFYNALLHEGYKDLAALLHSGLPLVSSSSGKDTDGGLTSFVRTVLCEGGVP
QRPVVFVTRKKLVKAIQQKLWKLNGEPGWVTIYGMAGCGKSVLAAEAVRDHALLEGCFPG
GVHWVSVGKQDKSGLLMKLQNLCTRLGQEESFSQRLPLNIEEAKDRLRVLMLRKHPRCLL
ILDDVWDPWVLKAFDNQCHILLTTRDKSVTDSVMGPKHVVSVDSGLGKEKGLEILSLFVS
MKKEDLPVEAHSIIKECKGSPLVVSLIGALLRDFPNRWAYYLRQLQNKQFKRIRKSSSYD
YEALDEAMSISVEMLREDIKDYYTDLSILQKDVKVPTKVLCVLWDLETEEVEDILQEFVN
KSLLFCDRNGKSFCYYLHDLQIDFLTEKNRSQLQDLHRKMVTQFQRYYQPHALSPDQEGC
MYWYNFLAYHMASANMHKELRALMFSLDWIKAKTELVGPAHLIHEFVEYRHILDEKDCAV
CENFQEFLSLNGHLLGRQPFPNIVQLGLCEPETSEVYQQAKLQAKQEVDSGGLYLEWINK
KTIKNLSRLVVRPHTDAVYHACFSQDGQRIASCGADRTLQVFKAETGEKLLEVKAHEDEV
LCCAFSSDDSYIATCSVDKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSSHLLLATGS
SDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPNDELLASCSADGTLKLWDVRSANEERS
INVKRFFLSPEDPQEDAEVMVQCCSWSADGSEIFVAARNKILLFDIHTSDLLAEIHTGHH
CTIQYCDFSPYDHLAVVALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTA
SDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENEMMVLAVDNIRGLQLIAGKTGQIDYLP
EAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSRLGHKKAVRHIQFTADGKTLIS
SSDDSVIQVWNWQSEDYVFLQGHQETVKDFRLLKNSRLLSWSFDGTVKVWNIITGRTEKD
FLCHQGAVLSCDVSSDAAKFSSTSADKTAKIWSFELLSPLHELEGHTGCVRCSAFSLDGI
LLATGDDNGEIRIWNVSGGQLLHLCAPISVEEGTATHGGWVTDLCFSPDSKMLVSAGGYL
KWWNVVTGESSQTFYTNGTNLKKIHVSPDFRTYVTVDNLGILYILQVLE
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaaaggcccggaattgtctgcttcaacacagagaggctctggaaaaggacatc
aaaacatcctacatcatggatcacatgatcagcgacaacgttttaacggtagtcgaggag
gaaaaagtgaggagccagaccactcagtatcaacgagccgctgctctgatcacgatgata
cttcataaagacaattgtgcctacgtttcattctacaacgctctcctgcacgagggatat
aaagaccttgctgcccttcttcacagtggccttcctctcgtctcttcttccagtggcaaa
gacacagacggcgggctaacgtcatttgtgaggaccgtgctttgtgaaggtggagtacca
cagaggccggtggttttcgtgactagaaagaagctggtgaaagcgattcagcagaagctc
tggaagctcaatggcgagccagggtgggtcaccatctacggaatggcgggctgtgggaag
tctgtgctggctgccgaagcggttcgcgatcacgccctcttagaaggttgtttcccaggg
ggtgtgcattgggtttcagttggaaaacaagacaaatctgggcttctgatgaaactgcag
aatctttgcacacgcctgggtcaagaggagagtttttctcagagacttccacttaacatc
gaggaggctaaagatcgtctccgtgttctgatgctacgcaaacaccccaggtgtctgctg
atcttggatgatgtttgggatccgtgggtgttaaaagctttcgacaaccagtgtcatatt
cttcttacaaccagagataagagtgttacggactctgtaatgggtcccaagcacgttgtc
tctgtggacagtggtctagggaaagaaaagggacttgaaatcttatcgcttttcgttagc
atgaagaaggaagatttgccagtggaggctcacagtattataaaagaatgcaaaggttct
cctcttgtggtgtctttaattggtgcacttttacgtgattttcccaatcgctgggcgtac
tacctcagacaacttcagaataagcagtttaagagaataaggaaatcttcctcttatgat
tatgaggctctggatgaagccatgtctataagtgttgaaatgcttagagaagatatcaaa
gattattacacagatctttccatcctgcagaaggatgtcaaggtccctacaaaggtgttg
tgtgttctctgggacttggaaactgaagaagtcgaagacatattgcaggagtttgtcaat
aagtctctcttattctgcgatcggaatggaaagtcattttgttattatttacatgatctt
caaatagattttcttacagagaagaatcgaagtcagcttcaggatctacacaggaagatg
gtcactcagtttcagaggtattaccagccacatgctctgtctccagatcaggagggctgc
atgtattggtacaatttcctagcctatcacatggccagtgccaatatgcacaaagaactt
cgtgcgttaatgttttccctggattggattaaagcaaaaacggaacttgttggccctgcc
catctgattcatgaatttgtggaatacagacatatattggatgaaaaggactgtgcagtc
tgtgagaattttcaagagtttttgtctttaaatggacatcttcttggacggcagccattt
cctaacattgtacaactgggcctctgtgagccagaaacttccgaagtctatcaacaagca
aagctgcaggccaagcaggaggtggacagtggagggctttacctggagtggataaacaag
aaaacaatcaagaacctctcgcgcctcgttgtccgcccccacacagatgccgtttaccac
gcgtgcttctctcaggatggtcagaggatagcttcctgtggagccgatagaaccttacag
gtgttcaaagccgagacaggagagaaacttcttgaggtcaaagctcacgaagacgaagtg
ctttgctgtgcattctcctcagatgacagttacatagcaacctgctcagtggataaaaaa
gtcaagatttgggactctgcgactgggaagctggtgcacacctatgacgagcactcagag
caagtcaactgctgccatttcaccaacaaaagcagtcacctcctcttggccaccggctcg
agcgacttcttcctcaaactctgggacctgaatcaaaaagaatgccgcaatactatgttt
ggccatacaaattcagtcaaccactgcaggttttccccgaatgacgagctgttggccagt
tgctcagctgacgggacgttaaagctttgggatgtgagatcagcaaacgaggagagaagc
attaacgtgaagcggttcttcctgagtccagaggaccctcaagaggacgcggaagtgatg
gtgcaatgctgttcctggtctgcagacggctctgagatcttcgtggcggccagaaacaaa
attctcctctttgatattcatactagtgacctattggcagagatccatacaggccatcac
tgcaccatccagtactgtgacttctccccctatgaccatctggcagtggttgccctgtcc
cagtactgtgtggagttgtggaatatagattcacgcttaaaggtagctgattgcagagga
catttaagttgggttcatggcgtgatgttttctcctgatgggtcatcatttttgacagct
tctgatgaccaaacaatacgggtctgggagacgaagaaggtgtgcaagaactctgccata
gtgttaaagcaggaaatagatgtcgtgtttcaagagaatgaaatgatggtccttgcagtt
gacaacatacgaggcctacaactcattgctgggaaaacaggccagattgactacctgcct
gaagctcaagtcagttgctgttgcctaagtccgcatcttgagtatgttgcgtttggagat
gaagatggagccattaagattatagaacttccaaacaacagagttttcagctccaggctc
gggcacaagaaagctgtgcggcacatccagttcacagctgacgggaagacgcttatttca
agttcggacgactctgtgattcaggtatggaattggcagtcagaggactatgtctttttg
caaggccatcaggaaacagtgaaggacttcaggctcctaaaaaattcaagattgctttct
tggtcatttgatggaacagtgaaggtgtggaatatcatcactggaagaacagaaaaagac
ttcctttgccatcagggtgcagtactttcttgtgatgtttcctctgacgctgccaagttc
tcatctacctctgctgataagactgcgaagatctggagttttgaactgctttcccctctc
catgagttggagggtcacactggctgtgtccgctgctctgccttctctctggatggcatc
ctgttggcaactggagatgacaatggagaaatcaggatatggaatgtctcaggtggccag
cttcttcatttgtgtgctccgatttcagtagaggaaggaactgctacccatggaggctgg
gtgaccgacctttgcttctctcccgacagcaaaatgcttgtctctgctggaggatatctt
aagtggtggaatgttgtcactggggagtcctcacagaccttctacacgaatggaacaaac
ctcaagaaaatccatgtgtcccctgacttccgcacatatgtgactgttgataaccttggc
attttatacattttacaggttctggagtaa
DBGET
integrated database retrieval system
