Arvicola amphibius (Eurasian water vole): 119805077
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Entry
119805077 CDS
T08327
Symbol
Trpc5
Name
(RefSeq) short transient receptor potential channel 5
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04360
Axon guidance
aamp04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
119805077 (Trpc5)
09158 Development and regeneration
04360 Axon guidance
119805077 (Trpc5)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aamp01009
]
119805077 (Trpc5)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aamp04040
]
119805077 (Trpc5)
Protein phosphatases and associated proteins [BR:
aamp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119805077 (Trpc5)
Ion channels [BR:
aamp04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
119805077 (Trpc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
Ank_5
PKD_channel
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
119805077
NCBI-ProteinID:
XP_038172813
LinkDB
All DBs
Position
X:complement(96826467..96958675)
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AA seq
974 aa
AA seq
DB search
MAQLYYKRVNYSPYRDRIPLQIVRAETELSAEEKAFLSAVERGDYGTVKQALQEAEIYYN
VNINCVDPLGRNALLIAIENENLEIMELLLNHSVYVGDALLYAIRKEVVGAVELLLSYRK
RGREKQVPTLLMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQKRVTIPRPHQIRCNCVE
CVSSSEVDSLRHSRTRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEFKAE
YEELSQQCKLFAKDLLDQARSSRELEIILNHRDDYSEELDPQKYHDLAKLKVAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCMTIGFLFPMLSIAYLISPRSNLGLFI
KKPFIKFICHTASYLTFLFMLLLASQHIVRTDLHLQGPPPTVVEWMILPWVLGFIWGEIK
EMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWEMWHPTLIAEA
LFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETKAIDEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTLPPP
FNLIPSPKSFMYLGSWFNNTFCPKRDANGRRMRHNLRSFTERHADSLIQNQHYQEVIRNL
VKRYVAAMIRNSKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKQPRRSFSTSSAEFSP
RDDTHDGHGGARAKTKSVSFNLGCKKKTCHEGPLIRTMPRASGTHQKSKSESSSKRSFMG
PSFKKLGLLFSKFSGQTSEPTSEPMYTISDGIAQQHYMWEDIRYSQMEQGKAEACSKSEM
NLSEVELGEIRGAAGRSECPLACSSSLHCVSRICSSNSKLLDSSEDVFETWGEACDLLMH
KWGDGQEEQVTTRL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcccagctgtactacaagagggtcaattactcaccgtacagagaccgcattcccctg
caaattgtgcgggctgagacggagctctctgctgaggagaaggccttccttagtgccgtg
gagaggggggactacggcaccgtgaagcaagcgctgcaggaggctgagatctactacaat
gtcaacatcaactgtgtggatcctttgggcaggaacgccctgctcattgccatagagaac
gagaacttggagatcatggagctactgctgaaccatagcgtgtatgtgggcgatgcattg
ctctatgccatccgcaaggaagtggtgggcgctgtggagcttctgcttagctacagaaag
cgcggtagagagaagcaggtacccactctgctgatggacacccagttctctgagttcaca
ccagacatcactcccatcatgttggctgcccacaccaacaactatgaaatcatcaaattg
cttgtccaaaagcgggtcactattccacggccccaccaaatccgctgcaactgtgtagag
tgtgtgtccagctcagaggtagacagcctgcgccattcaaggacccgactgaacatctac
aaggctctggcaagcccctcactgattgccttatcaagcgaggaccccatcctcactgcc
ttccggctgggctgggaactcaaggagctaagcaaggtggaaaatgagttcaaggctgag
tatgaggagctctcccagcaatgtaagctctttgccaaggacctgctagaccaagcgcgc
agctcccgagaactagagatcatcctcaaccatcgagatgactacagtgaagaacttgac
ccacagaagtaccatgatctggccaagctgaaggtggcaatcaaatatcaccagaaagag
tttgtcgctcagccaaactgccaacaattgcttgccaccttgtggtatgatggcttccct
ggatggcggagaaagcactgggtagtcaagcttctgacctgtatgaccattggcttcctg
tttcctatgctgtctattgcctatctgatctcacccagaagcaaccttgggctcttcatc
aagaagccctttatcaagttcatctgccacacagcttcctatctgaccttcctcttcatg
ctcctcctggcctctcagcatatcgtcaggacagacctccatttacaagggcctccccca
actgttgtggaatggatgattctgccttgggttctaggtttcatttggggggagataaag
gaaatgtgggatggtggattcacggaatacatccatgattggtggaacttaatggatttt
gcaatgaactccctctacctggcaacgatttccttgaagattgtggcctatgtcaagtat
aatggttctcgtccaagggaggaatgggaaatgtggcacccaactctgattgcagaggcg
ctcttcgcaatatccaacattttaagttccttgcgtctcatatccttgttcacagccaac
tcccacttagggcctctgcagatctctttgggacgcatgctgcttgatatactcaaattc
ctctttatctactgcctagtactgctggcttttgccaatggactgaaccagctttatttt
tactatgagaccaaagctatcgatgaacctaacaactgcaaggggatccggtgtgaaaaa
cagaacaacgccttctccacgctctttgaaaccctccagtcactcttctggtctgtattt
ggccttttaaatctctacgtcaccaatgtgaaggccaggcatgagttcaccgagtttgtg
ggagctactatgtttggaacatacaacgtgatctccctggtagtgctgctgaacatgctc
attgccatgatgaataactcctaccagcttattgccgatcatgctgacattgagtggaag
tttgcaagaacgaagctctggatgagttactttgatgaaggtggtaccttgccacctcct
ttcaaccttatccccagtcccaaatcatttatgtatcttggcagctggttcaataacacc
ttctgtccaaaaagagacgccaatggaagacgaatgagacacaacttgagaagcttcaca
gaacgccatgctgatagcctgatccaaaatcaacactatcaggaagttatcagaaattta
gtcaagagatatgtggctgcaatgataagaaactccaaaacaaatgagggactaacagaa
gaaaactttaaggaattaaaacaggacatctcaagctttcgttatgaagtacttgacctt
ttgggaaacagaaaacaaccaagaagaagcttttccactagcagtgctgaattctctcca
agggatgatacccatgatggccatggtggggcacgggccaaaactaagagcgtctctttc
aatttaggctgcaagaaaaagacctgccacgagggacctctcatcagaaccatgccaaga
gccagtggtactcaccagaagtcaaaatcagagtcatcaagcaagcgatccttcatgggc
ccctctttcaagaaactgggtctcttattctccaagtttagtggtcagacctctgaacct
acttcagagccaatgtacaccatctccgatggcattgcccagcaacattatatgtgggag
gacatcagatattctcagatggagcaagggaaggcagaggcctgttctaaaagcgaaatg
aaccttagtgaggtagagttaggtgaaatccggggtgctgctgggaggagtgaatgcccc
ctagcctgttccagctctcttcactgtgtatccagaatctgctcctccaattctaaactt
ttagactcatcagaggatgtgtttgaaacttggggagaggcttgtgacttgctcatgcac
aaatggggtgatggacaggaagaacaagttacaactcgactctaa
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