KEGG   Arvicola amphibius (Eurasian water vole): 119806470
Entry
119806470         CDS       T08327                                 
Symbol
Cxcl12
Name
(RefSeq) stromal cell-derived factor 1 isoform X1
  KO
K10031  C-X-C motif chemokine 12
Organism
aamp  Arvicola amphibius (Eurasian water vole)
Pathway
aamp04060  Cytokine-cytokine receptor interaction
aamp04061  Viral protein interaction with cytokine and cytokine receptor
aamp04062  Chemokine signaling pathway
aamp04064  NF-kappa B signaling pathway
aamp04360  Axon guidance
aamp04670  Leukocyte transendothelial migration
aamp04672  Intestinal immune network for IgA production
aamp04810  Regulation of actin cytoskeleton
aamp05163  Human cytomegalovirus infection
aamp05200  Pathways in cancer
aamp05323  Rheumatoid arthritis
Brite
KEGG Orthology (KO) [BR:aamp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    119806470 (Cxcl12)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    119806470 (Cxcl12)
   04061 Viral protein interaction with cytokine and cytokine receptor
    119806470 (Cxcl12)
 09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    119806470 (Cxcl12)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    119806470 (Cxcl12)
   04672 Intestinal immune network for IgA production
    119806470 (Cxcl12)
   04062 Chemokine signaling pathway
    119806470 (Cxcl12)
  09158 Development and regeneration
   04360 Axon guidance
    119806470 (Cxcl12)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    119806470 (Cxcl12)
  09172 Infectious disease: viral
   05163 Human cytomegalovirus infection
    119806470 (Cxcl12)
  09163 Immune disease
   05323 Rheumatoid arthritis
    119806470 (Cxcl12)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:aamp04052]
    119806470 (Cxcl12)
   00536 Glycosaminoglycan binding proteins [BR:aamp00536]
    119806470 (Cxcl12)
Cytokines and neuropeptides [BR:aamp04052]
 Cytokines
  Chemokines
   119806470 (Cxcl12)
Glycosaminoglycan binding proteins [BR:aamp00536]
 Heparan sulfate / Heparin
  Chemokines
   119806470 (Cxcl12)
SSDB
Motif
Pfam: IL8
Other DBs
NCBI-GeneID: 119806470
NCBI-ProteinID: XP_038174114
LinkDB
Position
2:complement(30926101..30938821)
AA seq 93 aa
MDAKVVAVLALVLAALCISDGKPVSLSYRCPCRFFESHVSRSNVKHLKILNTPNCALQIV
ARLKSNNRQVCIDPKLKWIQEYLEKALNKRLKM
NT seq 282 nt   +upstreamnt  +downstreamnt
atggatgccaaggtcgtcgccgtgctggccctggtgctggccgcgctctgcatcagtgac
gggaagcctgtcagcctgagctacagatgcccatgccgattcttcgagagccatgtctcc
agatccaacgtcaaacatctgaaaatcctcaacactccaaactgtgcccttcagattgtt
gcaagactgaagagcaacaacagacaagtgtgcattgacccgaaattaaagtggattcag
gagtacctggagaaagctttaaacaagaggctcaagatgtga

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