KEGG   Arvicola amphibius (Eurasian water vole): 119807998
Entry
119807998         CDS       T08327                                 
Symbol
Ift122
Name
(RefSeq) LOW QUALITY PROTEIN: intraflagellar transport protein 122 homolog
  KO
K19656  intraflagellar transport protein 122
Organism
aamp  Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:aamp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:aamp03037]
    119807998 (Ift122)
Cilium and associated proteins [BR:aamp03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   119807998 (Ift122)
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_IFT122_2nd Zn_ribbon_IFT122 WD40 Beta-prop_EML_2 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Zn_ribbon_IFT122_C EIF3I ANAPC4_WD40 WDR55 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd NBCH_WD40 TPR_GEMI5 TPR_IF140-IFT172 Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 Beta-prop_NUP159_NUP214 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR35_TULP_N TPR_IFT80_172 WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_Vps41 B-prop_COPA_B_2nd TPR_7 eIF2A WD40_MABP1-WDR62_1st TPR_COPA_B Beta-prop_IFT140_2nd Beta-prop_SPT8 Beta-prop_WDR75_1st
Other DBs
NCBI-GeneID: 119807998
NCBI-ProteinID: XP_038176203
LinkDB
Position
2:complement(32227478..32298696)
AA seq 1183 aa
MRAVLTWRDKVEQCIYDLAFKPDGTQLILAAGNRLLVYDTSDGTLLQPLKGHKDTVYCVA
YAKDGKRFASGSADKSIIIWTSKLEGILKYTHNDSIQCVSYNPITHQLASCSSSDFGLWS
PEQKSVSKHKSSSKITCCSWTNDGQYLALGMSNGVISIRNKNGEEKVKIERPGGSFSPIW
SICWNPSREEHNDILAVADWGQKLSFYQLSGKQIGKDRPLNFDPCCISYFTKGEYILVGG
SDKQVSLFTKDGVRLGTVGEQNSWVWTCRVKPDSNYVVVGCQDGTISFYQLIFSTVHGLY
KDRYAYRDSMTDVIVQHLITEQKVRIKCRELVKKIAIYKNRLAIQLPEKILIYELYSDDS
VDMHYRVKEKIVKKFECNLLVVCADHIILCQEKRLQCLSFSGVKEREWQMESLIRYIKVI
GGPAGREGLLVGLKNGQILKIFVDNLFAIVLLKQATAVRCLDMSASRNKLAVVDENDTCL
VYDIHTKELLFQEPNANSVAWNTQCEDMLCFSGGGYLNIKASTFPVHQQKLQGFVVGYNG
SKIFCLHVFSMSAVEVPQSAPMYQYLDRKMFREAYQIACLGVTDADWRELAMEALEGLEF
ETAKKAFTRVQDLRYLELISSIEERKKRGETNNDLFLADVFSYQGKFHEAAKLYKRSGHE
NLALDMYTDLCMFEYAKDFLGSGDPKETKMLITKQADWARNINEPKAAVEMYISAGEHTK
AIEISGSHGWVDMLIDIARKLDKAEREPLLMCARYFKKLDSPGYAAETYLKVGDLKSLVQ
LYVDTKRWDEAFALGEKHPEFKDDIYVPYAQWLAENDRFEEAQKAFHKAGRQGEAVRVLE
QLTHNAVVESRFNDAAYYYWMLSMQCLDMAQDPAQKDVMLDKFHHFQHLAELYHGYQTIH
RYTEEPFSFDLPETLFNISKFLLHSLTKATPLGISKVNTLFTLAKQSKALGAYKLARHAY
DKLRGLQIPARIQKSIELGTLTIRSKPFHDSEELVPLCYRCSTNNTLLNNLGNVCINCRQ
PFIFSASSYEVLHLVEFYLEEGIXDEEAVALIDLEAPRHKREGKWQEIASNNSQTLRLDE
TMDAIGDDDPFTAKLSFEQGGSEFVPVVVKPVQCCVPMSRRDVLIKRWPPPLQWQYFRSL
LPDAPSPCVPPGFQMFHSEDYELLVLQHACCPYCRRRIDDTAP
NT seq 3552 nt   +upstreamnt  +downstreamnt
atgagggctgtgttgacgtggagagacaaagtggagcagtgtatctacgacctcgcattt
aagcctgatggaactcaactgattctggctgcaggaaacagattgctggtttatgacacc
tctgatggcaccttacttcagcccctcaagggacacaaagacaccgtgtactgtgtggca
tacgcaaaggatggcaagcgctttgcatctgggtctgctgacaagagcatcattatctgg
acctcaaaactggaaggcattctgaagtacacgcacaacgactctatacagtgtgtctcc
tacaaccctatcacccaccagctggcgtcctgttcctccagtgactttggactgtggtct
cctgagcagaaatctgtctccaagcataaatccagcagcaagatcacctgctgcagctgg
acaaacgacggtcagtacctggctctcgggatgtccaatggggtcatcagcatccggaac
aaaaatggcgaagagaaagtgaagatcgagcggccagggggctccttctccccaatatgg
tccatctgctggaacccttcaagagaggaacataatgacatcctggctgtagctgactgg
ggacagaaactttccttctaccagctgagtggaaaacagattggaaaggatcggccactg
aactttgacccctgctgcatcagctacttcaccaaaggagagtacattttggtggggggt
tcagacaagcaggtatctcttttcaccaaggatggagtgcgcctggggaccgttggggag
cagaactcctgggtttggacctgtagagtgaagcctgactccaactatgtggtggtaggc
tgccaggatggcaccatttccttctaccagctcatcttcagcacagtccacggcctgtac
aaggatcggtatgcctacagggacagcatgacagatgtcatcgtccaacacctgatcacg
gagcagaaagttcggattaagtgcagagagcttgtcaagaaaattgccatctacaaaaat
cgattagctatccagctgccagagaagatcctcatctacgagctgtactcagacgactca
gtggacatgcactaccgggtgaaggagaaaattgtcaagaagtttgagtgcaacctgctg
gtggtgtgtgctgaccacatcatcctgtgccaggagaaacggctgcagtgcctgtccttc
agcggagtgaaggaaagggagtggcagatggagtctctcattcggtacatcaaggtgatc
ggtggccctgctggaagggaaggtctgttggtgggcctgaaaaacggtcagatcctgaag
atctttgtggacaatctctttgccattgtcctgctgaagcaggccacagccgtgcgctgc
ttggatatgagcgcctcccggaacaagttggctgtggtggatgaaaacgacacgtgcttg
gtgtacgacatccacacgaaggagctgctctttcaggaaccaaatgccaatagtgtggcc
tggaacacccagtgtgaggacatgctttgtttctccggaggaggctacctcaacatcaaa
gccagcactttcccggtgcaccagcagaagctgcaagggttcgtggttggctacaatggc
tccaagatcttctgccttcacgtcttctctatgtctgctgtggaggtgccacagtctgct
ccgatgtaccaatacctcgataggaaaatgttcagagaagcctaccagattgcctgtttg
ggagtgacagacgctgactggcgtgaactggccatggaagctctagaaggacttgagttt
gaaactgcaaagaaggcctttaccagggtgcaggaccttcgatacctagagctgatcagc
agtattgaggagaggaagaagcggggcgagaccaacaatgacctgtttctggcagatgtg
ttttcctaccaggggaagttccatgaggctgccaaactgtacaagaggagcgggcacgag
aacctcgcactcgacatgtatactgacctctgcatgttcgagtatgccaaggatttcctt
ggatctggagaccctaaagaaacaaagatgctcatcaccaagcaggccgactgggcgaga
aacatcaacgagcccaaagctgcggtggagatgtacatctcagcaggggagcacaccaag
gccatagagatcagtggcagccatggctgggttgacatgttgattgacattgctcgaaag
ctggacaaggctgagcgggagcccctgctcatgtgtgctcggtactttaagaagctggac
agtcctggctatgctgccgagacctacctaaaggtcggtgacctgaagtctctggtacag
ctgtatgtggacaccaagcgctgggacgaggcctttgctttgggtgagaagcaccctgag
tttaaggatgacatctacgtgccctatgcgcagtggctagcggagaatgaccgctttgag
gaagcccagaaagcattccacaaggccgggaggcaaggggaagcagttcgcgtgctggag
cagctcacgcacaatgccgtggtggagagcaggtttaacgacgctgcctattattactgg
atgctgtccatgcagtgcctcgacatggcacaagatcctgcccagaaggatgtgatgctt
gacaaattccaccatttccagcacctggctgagctataccatggctaccaaaccattcat
cgctacacggaggagccattcagcttcgatctccccgaaaccctcttcaacatctccaag
ttcttgctgcacagcctgaccaaggccacccccttgggcatctccaaagtgaataccctc
ttcacactggccaagcagagcaaggccctgggtgcctacaagctggcccggcacgcctat
gacaagcttcgggggctgcagatccccgccaggatccagaagtccattgaactgggcacc
ctgaccatccgctccaagcctttccacgacagtgaggaactggtgcccttgtgctaccgc
tgttccaccaacaacacgctgctgaacaacctgggcaacgtgtgcatcaactgccgccag
ccatttatcttctccgcctcttcctatgaggtgctgcatctggtggaattctacctggaa
gagggaatcnctgacgaagaagctgttgccctcatcgacctggaggccccaagacacaag
agggagggcaaatggcaggagattgcaagcaacaactcccagacgctgagactggatgag
accatggatgccataggagacgatgacccgttcacagccaagctgagctttgagcaaggt
ggctctgagttcgtgcctgtggtggtgaaaccggttcagtgctgcgttcccatgagcaga
agggacgttctcatcaagcgctggcccccgccactgcagtggcagtacttccgctcgctg
ctgcctgatgctccatcaccatgtgtccctcctggctttcagatgttccattcagaggac
tacgagctgctggttctccagcatgcctgctgcccctactgccggagacgcattgacgat
actgccccgtga

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