Arvicola amphibius (Eurasian water vole): 119809008
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Entry
119809008 CDS
T08327
Symbol
Ldlr
Name
(RefSeq) low-density lipoprotein receptor
KO
K12473
low-density lipoprotein receptor
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03272
Virion - Hepatitis viruses
aamp04144
Endocytosis
aamp04913
Ovarian steroidogenesis
aamp04925
Aldosterone synthesis and secretion
aamp04927
Cortisol synthesis and secretion
aamp04934
Cushing syndrome
aamp04976
Bile secretion
aamp04979
Cholesterol metabolism
aamp05145
Toxoplasmosis
aamp05160
Hepatitis C
aamp05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
119809008 (Ldlr)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119809008 (Ldlr)
09150 Organismal Systems
09152 Endocrine system
04913 Ovarian steroidogenesis
119809008 (Ldlr)
04925 Aldosterone synthesis and secretion
119809008 (Ldlr)
04927 Cortisol synthesis and secretion
119809008 (Ldlr)
09154 Digestive system
04976 Bile secretion
119809008 (Ldlr)
04979 Cholesterol metabolism
119809008 (Ldlr)
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
119809008 (Ldlr)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
119809008 (Ldlr)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
119809008 (Ldlr)
09167 Endocrine and metabolic disease
04934 Cushing syndrome
119809008 (Ldlr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamp04131
]
119809008 (Ldlr)
Membrane trafficking [BR:
aamp04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
119809008 (Ldlr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
cEGF
FXa_inhibition
EGF_CA
SGL
EGF
EGF_LRP2
hEGF
Psg1
Vgb_lyase
Motif
Other DBs
NCBI-GeneID:
119809008
NCBI-ProteinID:
XP_038177565
LinkDB
All DBs
Position
3:90147147..90172827
Genome browser
AA seq
857 aa
AA seq
DB search
MSTGDLALRWAIALLLAAAGAAAKDTCSRNEFQCTDGRCISSKWVCDGTPECPDGSDESS
ETCMSVTCKSKEFSCGGLVSRCIPDSWRCDGQTDCENGSDEQGCAPKTCSPDEFRCQDGK
CISQKFVCDQDRDCLDGSDEAHCQATTCGPAHFRCNSSSCIPSLWACDGDGDCEDGSDEW
PQNCGGRDTASVPSSGPCSSLEFHCGSSECIHRSWVCDGSADCKDKSDEEHCVAATCRPD
EFQCADGTCIHGSHQCDREYDCKDASDELGCINVTQCDGPNKFKCRSGECISLDKVCDST
RDCRDWSDEPIKECRTNECLDNNGGCSHVCKDLKIGYECLCPNGFQLVDRHRCEDIDECQ
EPDTCSQLCVNLEGSYKCECRAGFHMDPHSSVCKAVGSVAYLLFTNRHEVRKMTIDRSEY
TSLIPNLKNVVALDTEVANNRIYWSDLSQGKIYSTLMDRAPSLSYDTIISGDLQAPDGLA
VDWIHGNIYWTDSVPGSVSVADTKGGRRTTLSQEKGTKPRDIVVDPVHGFMYWTDWGTPA
KIKKGGLNGVDIYSLVTEDIQWPNGITLDIPSGRLYWVDSKLHSISSIDVNGGNRKTILE
DEKQLAHPFSLAIYEDKVFWTDVMNEAIFSANRLTGSDVNLVAENLLSPEDIVLFHNVTQ
PRGVNWCERTALPNGGCEYLCLPAPQINPHSPKFTCACPDGMLLAADMRSCLPEVTPVLT
TQGTSTIRSVVTGATVRSPQHTEDQSASSTSREPVDVPGLSTAESVTVSHQVQSGRGSEE
PQGVSVLSIILPVALVVILVFGAILLWRNWRLRSINSINFDNPVYQKTTEDELHICRSQD
GYTYPSRQMVSLEDDVA
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccggggatctagcgctgcgctgggccatcgccctgcttctggctgctgctggg
gctgcagccaaagacacatgcagcaggaacgagttccagtgcacagacgggaggtgcatc
tccagcaagtgggtctgtgacggtaccccggaatgcccggacgggtccgacgagtcctcg
gagacgtgcatgtctgtcacctgtaaatccaaggaattcagctgtgggggccttgtcagt
cgctgcattcctgactcctggcgttgtgacggacagacagactgtgagaacggctcggac
gagcaaggctgtgcccccaagacgtgctccccagatgagttccgctgccaggacggcaag
tgcatctcccagaagtttgtgtgtgaccaggaccgagactgcctggatggctccgacgag
gcccactgccaggccactacctgcggccccgcccatttccgctgcaactcctccagctgt
atccccagcctgtgggcctgcgacggcgatggtgactgtgaggacggctccgacgagtgg
ccccagaactgcgggggccgcgacactgcctctgtccccagcagcggcccctgctcctcc
ctggaattccactgtggcagcagcgagtgcattcatcgcagctgggtctgtgatggcagt
gcggactgcaaggacaagtcggacgaggaacactgcgtggcggccacctgccggcccgat
gagttccagtgtgcggatggcacctgcatccatggcagccaccagtgtgaccgtgaatat
gactgcaaggatgcgagcgacgagcttggctgcatcaatgtgacacagtgtgacgggccc
aacaagttcaagtgccgcagtggcgaatgtatctccttggacaaggtgtgcgactccacc
cgggactgccgggactggtcggatgagcccatcaaggagtgcaggaccaacgagtgcttg
gacaacaatggcggctgctcccatgtctgcaaggacctcaagattggctacgagtgcttg
tgtcccaatggcttccagctggtggaccggcacagatgcgaagatattgacgagtgccag
gagccggacacctgcagccagctctgcgtgaaccttgaaggcagctacaagtgtgaatgc
cgggccggcttccacatggaccctcacagcagcgtctgcaaggccgtgggctccgtagct
tacctcctcttcactaaccgccatgaggtccggaagatgaccattgaccgcagcgagtac
actagcctgatccccaacctgaagaacgtggtggccctggacactgaagtggccaacaat
agaatctattggtctgacctgtcccaaggaaagatctacagcaccctgatggaccgagcg
cctagcttgtcctatgacaccatcatcagtggggacctgcaggccccggatgggctggct
gtagactggatccatggcaacatctactggacagattcggttccaggcagtgtgtctgtg
gctgacaccaagggaggaaggaggacaacgctgtcccaagagaaagggaccaaacccagg
gacattgtggtggatcccgtgcacggcttcatgtactggacagactgggggacgcctgcc
aagatcaagaaagggggcctgaatggtgtagacatctactcgctggtgactgaggacatc
cagtggccaaatggcatcacactagatattcccagtggccgcctctattgggtcgattcc
aaacttcactctatctccagcatcgatgtcaatgggggcaatcggaagaccattttggag
gatgagaagcagcttgcccaccccttctccttggccatctatgaggacaaagtgttttgg
acagatgtcatgaatgaagccattttcagtgctaatcgcctcacgggttcagatgttaat
ttggtggctgaaaacctcttgtcgccagaggacattgtcctgttccacaacgtcacacag
cctagaggagtgaactggtgtgagagaacggccctccccaacggtggctgcgagtacctg
tgcctgccagccccgcagatcaacccccactcccccaagttcacctgtgcctgtcctgat
ggcatgcttctggccgccgacatgagaagctgcttgccagaagtcacacctgtcctgacc
acccaggggacatctaccatcaggtctgtggtcactggagcaaccgtgaggtctccacag
cacacggaggatcagtcggcttccagcacttccagggagcccgtggacgtccctggcctc
agcacggctgagtcggtgacagtgtcccaccaagttcagagtggcagagggagcgaggag
ccacagggagtgagtgtcttgtccatcatcctccccgttgcactggtcgtcatccttgtc
tttggggccatcctgctctggaggaactggcggctaaggagcatcaacagcataaacttt
gacaacccagtgtaccagaagaccacagaggacgaactccacatttgccgaagccaggac
ggctacacctacccctcaagacagatggtcagcctggaggatgatgtggcatga
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