Arvicola amphibius (Eurasian water vole): 119809746
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Entry
119809746 CDS
T08327
Symbol
Rnf123
Name
(RefSeq) E3 ubiquitin-protein ligase RNF123
KO
K12169
Kip1 ubiquitination-promoting complex protein 1 [EC:
2.3.2.27
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aamp04121
]
119809746 (Rnf123)
Enzymes [BR:
aamp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119809746 (Rnf123)
Ubiquitin system [BR:
aamp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119809746 (Rnf123)
Multi subunit type E3
KPC complex
119809746 (Rnf123)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-C3HC4_3
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
119809746
NCBI-ProteinID:
XP_038178751
LinkDB
All DBs
Position
3:complement(174440129..174469598)
Genome browser
AA seq
1314 aa
AA seq
DB search
MASKGAGMSFPQKSYRLTSDAEKSRVTGIVQEKLLNDYLYRIFSSPDRGPPAAISRKPLN
FHNLSEHVEQLLQVDSEDEESQGQAEGRLGPSTVVLDHTGGFEGLLLVDDDLLGVIGHSN
FGTIRSTTCVYKGKWVYEVLISSQGLMQIGWCTINCRFNQEEGVGDTHNSYAYDGNRVRK
WNVTTTNYGKAWAAGDIVSCLIDLDDGTLSFCLNGVSLGTAFENLSRGLGMAYFPAISLS
FKESVAFNFGSRPLRYPVAGFRPLQDPPFADLVRAQRLLGCFQAVLSVELDPVEGRLVEK
ESAEWQLQGQPTVLLTLAHIFHHFAPLLRKVYLVEAVFMSFLLGIMEKGTPEQAQSVVHQ
ILDLLWLFMEDYEVQDCLKQLMMSLLRLYRFSPIVPDLGLQIHYLRLTISILRHEKSRKF
LLSNVLFDMLRSVVFFYIKSPLRVEEAGLQELIPTTWWPHRSSREGRDSKEAEEETTEER
QRRRAYERGCQRLKKRIEVVEGLQVQILKLLLDNKDDNGGEASRYIFLTKFRKFLQENAS
GRGNMPTLCPPEYMVCFLHRLVSALRFYWDEYKVSNPRAAFSEEAYVPPQIFYNGKVDYF
DLQRLGGLLSHLRKTLKDDLASKANIVIDPLELQAATMDDLDEDEEPASTAAQRPMQALA
MGGALPLPRPGWLSSPTLGRANRFLSTAAVSLMTPRRPLSTMEKVKVRSLNVEQRTREDI
EGSHWNEGLLLGRPPEEPEQPLTENSLLEVLDGTVMMYNLSVHQQLGKMVGVSDDVNEYA
MALRDTEDKLRRCPKRRKDILAELTKSQKVFSEKLDHLSRRLAWVHATVYSQEKMLDIYW
LLRVCLRTIEHGDRTGSLFAFMPEFYLSVAINSYSALKNYFGPVHSMEELPGYEETLTRL
AATLAKHFADPRIVGTDIRDSLMQALASYVCYPHSLRAVERIPEEQRIAMVKNLLAPYEQ
RPWAQTNWILVRLWRGCGFGYRYTRLPHLLKTKPEDANLPSLQKPCPSTLLQQHMADLLR
QGPDVAPSFLNSVLNQLNWAFSEFIGMIQEIQQAAERLERNFVDSRQLKVCATCFDLSVS
LLRVLEMTITLVPEIFLDWSRPTSEMLLRRLAQLLNQVLNRVTAERNLFDRVVTLRLPGL
ESVDHYPILVAVTGILVRLLVHGPASETEQATSVLLADPCFQLRSICYLLGQPEPLAPGT
TLPAPDRKRFSLQSYTDYINAEELAQVEQMLAHLTAASAQAAAASLPTSEEDLCPICYAH
PISAVFQPCGHKSCKACINQHLMNNKDCFFCKATIVSVEDWDKAATTSATSSAA
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atggcatccaagggggctggcatgtcttttccccaaaagagctatagactgacttcagat
gctgagaagtccagggtcacaggcattgtgcaggagaaactactgaatgactacctgtac
cgtatcttttcctctcctgaccgtgggccccctgcagccatcagcaggaaacccctgaac
ttccataacctgtcagagcacgtggaacagctgctccaggtggacagtgaagacgaggag
agccagggacaagctgaggggcgacttgggccatctactgtggtcctagaccacacagga
ggcttcgaggggcttctcctcgtggatgatgacctcctgggggtgattggacacagcaac
tttggcactattcgttctaccacatgtgtgtacaaagggaagtgggtctacgaggtgctc
atctcctcccagggtctcatgcaaatcggctggtgcaccatcaactgccgctttaaccag
gaggaaggggttggagatacacataactcctacgcctatgacgggaaccgggtgcgcaaa
tggaatgtgaccacaacaaattatggcaaggcatgggcagcgggggacatcgtgagctgc
ctcattgatctggatgatggtactctatccttttgcctgaatggtgtgtcgctgggcacc
gcctttgagaacctgtccaggggcctaggaatggcctacttcccagccatcagcctgtca
ttcaaggagtctgtggcattcaacttcggcagccgtcctttgcgctacccagttgcgggc
ttccggcccctgcaggaccctccatttgccgacctggtgcgggcacagagattgctgggc
tgtttccaggcagtgctgagtgtggaactggaccctgtggaagggcggttggtggagaag
gagagcgctgagtggcagctgcaagggcagcccactgtcctgcttacactggcccacatc
ttccatcacttcgcaccacttctgcgcaaggtttacctcgtggaggctgtgttcatgagc
ttcctgctggggatcatggagaagggcacgcctgagcaggcacagtctgtagtacaccag
atcttggacctcttgtggctcttcatggaggactatgaggtacaggattgcctcaagcag
ttgatgatgtctctgctgcgtctctaccggttttcaccgattgtcccagacctgggtcta
cagatccactacctgcgcctcactatttccatcctgagacacgagaagtcccgcaagttt
ctgcttagtaacgtcctttttgacatgctccggtccgtggtcttcttttatattaagagt
cccctgcgtgtggaggaggctggcctgcaggaactcattcccaccacctggtggccccat
cgctccagcagggagggcagagacagtaaggaggcagaggaagagaccactgaggagcgg
caaaggaggcgagcctatgagcgaggctgccaaagactcaagaagcgcattgaagtggtg
gaaggactacaggtccagatcctgaagctgttgttggacaataaggatgacaatgggggc
gaagcttctaggtacatttttctgacaaaattccggaagtttctgcaggagaatgccagt
ggccgggggaacatgcccacgctctgcccccctgagtacatggtctgcttcttacaccgg
cttgtatctgccctgcgcttctattgggacgaatacaaagtttccaacccccgtgctgcc
ttcagtgaggaggcttatgtcccaccgcagatcttctacaacggcaaggtggattacttt
gaccttcagcgccttgggggcctcctctcacaccttcgaaagaccctaaaagatgacctt
gcttccaaagccaatattgtgattgatcccctggagctccaggcagctaccatggatgac
ctggatgaggatgaagagccagcctcaacggcagcccagcgtcccatgcaagccctggcc
atgggaggggcactgcccctgccccggccaggctggctcagttctccaaccctgggccga
gccaaccgcttcctcagcacagctgctgtgagcctcatgaccccacggcgacctctgagc
accatggagaaagtaaaggtccgctcgctgaacgtggaacagaggactcgtgaggacatt
gagggcagccattggaatgagggcctgctgttggggagaccccctgaagagcccgagcag
ccccttacggagaactccctgttggaagtcctggatggcactgtcatgatgtataacctc
agcgtccaccagcagctgggcaagatggtgggcgtgtccgatgatgtcaatgagtatgcc
atggccctgagagacacagaggacaaactccgccgctgccccaagaggagaaaggatatc
cttgcagagctgaccaagagccagaaagttttctcagaaaagctggaccacctgagccgc
cggcttgcctgggtccatgccactgtctactcccaggagaaaatgctggatatctactgg
ctgctgcgtgtctgcctacggaccatcgagcatggggatcgcacaggatcactttttgcc
ttcatgcctgagttctacctaagcgtggccatcaacagctacagtgctctcaagaattat
tttggccctgtgcacagcatggaggagctcccaggatatgaagagaccctgacccgcttg
gctgccacccttgccaaacactttgctgacccacgcatcgtaggcactgacattcgagac
tcactgatgcaggccctggccagctatgtgtgctacccacactccctgcgggctgtggaa
cggatccccgaggagcaacgtatcgccatggtgaagaaccttttggcaccctatgagcaa
cggccctgggcccagaccaactggatcctagtacggctttggaggggctgtgggtttgga
taccgctatacacggcttccgcatctgctgaaaaccaagccagaggatgccaatttaccc
agccttcaaaaaccctgcccctccaccctgctgcagcagcacatggcagacctgctgcga
caagggcctgatgtagcacccagcttcctcaacagcgtccttaaccagctcaactgggcc
ttctctgagttcatcggcatgatccaggagattcaacaggctgctgaacgcctggagcga
aactttgtggacagccggcagctcaaggtctgtgccacctgctttgacctctcggtcagc
ttgttgcgagtcttggaaatgaccatcacattggtgcctgagatattccttgactggtcc
cgccctacctctgagatgctgcttcggcgtcttgcacagctgctgaaccaggtgctgaac
cgggtgacagctgagaggaacctgtttgaccgtgtggtcaccctacggcttcctggcctg
gagagtgtggaccactaccctatcctggtggcagtgaccggcatcctggtacgcctcctg
gtgcatggtccagcctcagagacagagcaagccacctcggtgctcctggctgatccctgc
ttccagctccgttccatatgctatctcctggggcagccagagcccctagcacctggcact
accttgcctgccccggaccggaaacgcttctctctacagagttatacagattatatcaat
gcggaggagctggcccaggtggagcagatgctggcacacctgacggctgcgtctgcccag
gcagcagcggcctccctgcccaccagtgaagaggacctctgcccaatctgctatgcccac
cccatctctgctgtgttccagccttgtggccacaagtcctgcaaagcctgcatcaaccag
catctgatgaacaacaaggactgcttcttctgcaaggccaccatcgtgtctgtagaggac
tgggacaaggcagccaccacaagtgccacctcctcggctgcctag
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