Arvicola amphibius (Eurasian water vole): 119811456
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Entry
119811456 CDS
T08327
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1a-like
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
119811456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamp04131
]
119811456
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
aamp04054
]
119811456
Membrane trafficking [BR:
aamp04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
119811456
Pattern recognition receptors [BR:
aamp04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
119811456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
FIIND
UPA-FIIND
NLRC4_HD2
CARD
NOD2_WH
AAA_16
LRR_6
nSTAND3
NPHP3_N
NB-ARC
AAA_22
AAA_14
LRR_4
AAA_30
nSTAND_NTPase4
RsgA_GTPase
AAA_33
ABC_tran
Motif
Other DBs
NCBI-GeneID:
119811456
NCBI-ProteinID:
XP_041910814
LinkDB
All DBs
Position
4:49628248..49662291
Genome browser
AA seq
1153 aa
AA seq
DB search
MVERSHQEQMCQFVFHCQDRKQRLGIISEIYQSKRRENLYPTQIQKTNDLLQNFTQLLLL
QKPCPRSWETLLWKSWHKYKGEERGHLIEIQDLFCPSQDIQKETQLVVLEGASGIGKSTL
ARQVRRAWEEGQLYRNLFQHVFYFSCRELAQCKQLSLAELIAKDQTLPAAPIREILSHPE
KLLFILDGIDEPAWVLEDKNPKFCLHWSQTQPVHTLLGSLLGKSVLPQASLLLTARTTVL
KKFIPSLGQPRWVEVLGFSKAEWKKYIYKYFTEEREAMAAFNLVKSNPVLSALCGVPWVS
WLVCTCLKQQIDRGEDLSLTSQTTTELYLKYLSQALSGHALGNQLRALCSLAAEGICRRK
TLFSDRDFQIQGLADGVIATFLNIGILQKHPESLSYSFAHLYLQEFFAAMSYALENVPRH
GYMNVDRIVEALKEVYGRHDLFEAPTMRFLFGLSSKTGIRETEKIFACSLLQETGLCLQQ
HILKETQHHQQYTLGLLHCLYETQDGDLLTNVMHIFQGTRVHTSVDILQPVFQTNINHLV
VQTDMELMVITFCIKFCHHVKRLQLNACGQQGQTLAAPSMVLSRWTPITDATWQIFFSTL
EFSGNLQELDLSGNPLSYYAVQSLCRTLRCPKCQLRTLWLVNCGLTFRHCADLAPVLSAS
SSLTELHLQLNDLGDHAVSLLCQWLRNPACKLRILGLDQAPLSDPVIMELRALEAENPQL
LISSTWNPRVMVPTENPGGEGMDDSLTLFNQQRLQSEHKHMEALGTEDDFWGPTGPVATE
VIDRERNLYRVQFPVAGSYHCPNIGLHFVVTRAVTIEIEFCAWSQYLDQTPFQDSHMVAG
PLFNIKAEQGAVAAVYLPHFVNLKEGEVDTSWFCVAHFQKHGMILEEPARVEQCYTVLEN
PSFSPMGVLLRKIPAVRNFIPITSNTLIYYHLNVNDVTLHLYLIPNDCTIQKAIDEEEMR
FQFFRIHKPPPVDSLYIGSRYIVSASKKLEIIPKELELCYRSPGEPQLFSEIYVGHMGSD
IKLHIRDKKNRNLKWEALLKPGDLRPTQPMILTSPEDASALPHFVDQHREQLVARVTSVD
PLLDKLLGPVLREEEYEAVRAEATNQDKMRKLFSFSRSWGLDSKEQVYQALKKTHPHLIM
DLFERSGGGPVGS
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atggtggagcggtcacatcaagagcaaatgtgtcagtttgttttccattgccaggacaga
aaacagagactgggaatcatttcagaaatatatcagagcaaaagaagagaaaatctttac
cccacacagatccagaaaacaaatgatttgctgcaaaatttcacacagctactacttcta
caaaaaccttgcccaagaagttgggaaaccttgctttggaaaagctggcataaatataaa
ggagaggagaggggacatctgattgagatccaagacttattttgcccaagtcaagatatc
cagaaagagacacaacttgttgtattagagggggcttctggcattgggaagtcaacactg
gcaaggcaggtgaggagagcatgggaggaaggccagctctacaggaatctcttccagcat
gtcttctacttcagctgcagagagctggcccagtgcaagcagctgagtctggctgagctc
atagcaaaagaccagactctgcctgcagctcccatcagggagatcctgtctcaccctgag
aagctgctcttcatcctggatggcatagatgagccagcatgggtcttggaagataagaat
cccaagttctgcctgcactggagccagacacaacctgtgcacacactgctgggcagtttg
ctggggaaatctgttctgcctcaggcttccttgctgctcacagctcgaaccacagttctg
aagaagttcattccttccttggggcagccacgttgggtggaagtcctgggcttctctaag
gctgaatggaagaaatacatctacaaatatttcacagaggaaagagaagcaatggcagct
tttaacttggttaaatcaaacccagtgctctcagcactgtgtggggtgccctgggtgtcc
tggctggtctgcacctgcctgaaacagcagatagatcggggagaagacctctcactgacc
tcacagaccaccacagagctctacctgaaatacctttcccaggctctctcaggtcatgcc
ctggggaaccagctcagagctctctgctcactggctgctgagggaatctgccgaagaaag
accctgttcagtgacagagattttcagatccaaggattggctgatggtgtcattgccact
ttcctgaatattggtatccttcaaaagcatcctgaatctctgagttacagttttgcccac
ttgtatctccaggagttctttgctgcaatgtcctatgcactggagaatgtgccaagacat
ggttatatgaatgtcgacagaattgtggaagcactaaaggaagtctatggaagacatgac
ctgtttgaggcacccactatgcgcttcctatttggtctttcaagtaaaacaggaataaga
gaaacagagaaaatctttgcctgcagtttgcttcaggagacagggttgtgcctacaacag
cacatcctaaaggaaacccaacaccatcaacaatatactcttggtctactccattgtctg
tatgagactcaggatggggacctcctgaccaatgtaatgcacatttttcagggaacaagg
gtgcatacctcagtggatatactacagccagtgttccagacaaatattaaccacctggtg
gtccagacagatatggaactcatggtgatcactttctgcattaagttctgccaccatgtg
aaaaggcttcagctgaatgcttgtggacaacagggacaaacgctggcagcccccagtatg
gttctgtccaggtggactccgatcactgatgccacttggcagatattcttttccactctt
gagttctcaggaaatctgcaggagctggacctaagtggaaatccactgagctactatgca
gtgcaaagtctctgtaggacactcagatgccctaaatgtcaactaaggacattgtggctt
gtcaactgtggcctcacattcaggcactgtgcggacctggctccagtgctcagtgccagc
tccagcctgactgagctacacctgcagctgaatgatctgggagaccatgctgtgagtctg
ctgtgtcagtggctcaggaatcctgcctgcaaactcagaatcctggggctggaccaggcc
cctctcagtgacccagtgattatggagctcagggccctggaggcagagaatccacagctg
ctcatctccagcacatggaatccacgtgtgatggtccctactgagaacccaggtggagaa
ggaatggatgacagcctgaccttattcaatcagcagagactacagtcagaacacaaacac
atggaagcactggggactgaagatgacttctggggtcctacaggacctgtggctacagag
gtgattgacagagaaaggaacctgtacagagttcagttccctgtggctggttcctaccac
tgtcccaacataggactccactttgtggtgacgagggcagtgaccatcgagattgaattc
tgtgcctggagccaatacctggaccagactccctttcaggacagtcacatggtggctggg
cctctgtttaacatcaaggctgagcagggagctgtggctgctgtgtacctccctcacttt
gtgaatctcaaagagggagaggtggacacctcctggttctgtgtggcccactttcaaaaa
catgggatgatcctagaagagccagccagagtggagcagtgctacacagtcttggaaaac
ccaagcttctccccaatgggagttctactgagaaagatccctgctgtcaggaacttcatc
cctatcacttccaacacattgatctactatcacctcaatgtcaatgatgtcacacttcac
ctctacctaattcccaatgactgcaccattcaaaaggccattgatgaagaagaaatgagg
tttcagttttttcgaatacacaagccacccccagtagactctctttacattggctcgcgg
tacatagtctctgcttccaagaagctggaaatcattccaaaggaactggagctgtgctac
cggagccctggggaaccccagctcttctctgagatctatgttggccacatgggttcagat
attaaactgcacatcagagacaaaaagaataggaatctcaaatgggaagccttgctgaaa
ccaggagacctcaggcctacacagcccatgatccttacatcccccgaagatgcttctgcc
ttgccacactttgtggaccagcatcgggagcagctggtggcccgagtgacatcagtggac
cctctcttggacaagctgcttggtccggtgctgagggaagaggagtatgaggcagtgcgg
gctgaagccaccaaccaagacaagatgcggaagctcttcagcttcagccggtcctggggc
ttggacagcaaagaacaagtctatcaagctctaaagaaaacacatcctcacctcatcatg
gacctttttgagaggtcaggtggtggccctgtgggatcctga
DBGET
integrated database retrieval system
