Arvicola amphibius (Eurasian water vole): 119812878
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Entry
119812878 CDS
T08327
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1a-like
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
119812878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamp04131
]
119812878
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
aamp04054
]
119812878
Membrane trafficking [BR:
aamp04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
119812878
Pattern recognition receptors [BR:
aamp04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
119812878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
FIIND
UPA-FIIND
NLRC4_HD2
CARD
PYRIN
NOD2_WH
LRR_6
AAA_16
NPHP3_N
AAA_14
NB-ARC
nSTAND_NTPase4
AAA
AAA_22
nSTAND3
Zeta_toxin
AAA_30
CHCH
Motif
Other DBs
NCBI-GeneID:
119812878
NCBI-ProteinID:
XP_038183814
LinkDB
All DBs
Position
4:49892232..49928036
Genome browser
AA seq
1286 aa
AA seq
DB search
MSDRTQQRLTYCLEQLSKEELKEFQHRLPKQTVWPEASGTKIASSLVAQYGNHQAWNMAL
HIWKKMGMKQLLSQAQQGKDLTLTYDPSLLSFPSTSNVESSSQPASTGFRPDHQSSSLQM
STKKTFVKKRTKPGCRTRETTIKTCQNQRRESPCHTRSWETEDFHQKYAQLLLLQKSCPR
SQRSVVREGGGHQDIKDRGHPIAIQDLFGPSPGSQKKPQLVILEGAAGIGKSTLARQVRR
AWGEGQLYRDRFQHVFYFSCRELAQCEQLSLAELIAKYENVCKDLIEEILSHPEKLLFIL
DGIDEPAWVLQNPKFYRHWSQSQPVHTLLGSLLGKSLLPQASLLLTARTTELQTLIPSLE
QPRWVEVLGFSESGRKEFFYTYFAEEREAITAFTLVESNPVLLTLCLVPWVSWLVCACMK
QQMEHGGDLSLTSQTTTALCLKYLSQALPAQPLGTGLRGLCSLAAAGICRKKSLFSVKDL
RKQKVPGSVISTFMSTGILQKQPNSTNYSFAHLCLQEFFAAMSCVLDYEEEKDNCENFKA
VEKLIEVYGRLDLAEGPAVGFLCGLLSDQAMDEMKNIVTCWLPLERRWELLKRVLEEAHL
QHSYSLGLLHCLYEIQDEELLTRAMDSFQGTRVHVQTDMMHPGFQADVKHLVVQTDVELM
VVTFCIKFCRQVKALQLDGGGWQEQALRVPRLVLSRWTPITDATWQVFFSTLEFTESLEE
LDLSGNPMSYSAVQSLCRMLRHAKCHLKTLWLVSCGITASSCEDLASVLSTNRSLTELDL
QLNDLGDQGVRLLCEGLRNPACNLRILRLDSSSLNDQVMVELKAENPKLLIQSTRKSPVE
VSTPDLDKGETSAGPSSLKRQRLQLEKVSKQEALPVAQLKLPHLLQSFPGGTLIASLKIE
DSFWGSTGPLATEVVDSKRNLYRVQFPMAGSYHWPSTGLRFVVTRAAIIDIEFCAWSQFL
GKTPLEQSHVVAGPLFDIKAEQGIVDTVYLPHFVALQGIQDTSKFQVARFLKHGVVLETP
AEVKPHCTVLKNPRFSTIGVMLKIIPVTRRFLPITSITLLYHQPHAEEHKFHLYLIPNDC
TIRKAIDDEEMKFRFVRIHKPPPMGSLYVGSRYTVSGSGTMEITPKELELCYRSSTEAQL
FSEIYVGCLQSGIRLEIKDKNADVVWETVLKPGDLRPASTLVDAAPTVARPFRHFVDQHR
EQLVARVTSVDPVLDRLFGQVLSEEQYEMVRAEATNPNKMRRLFSYSQSWDLARKSQFYQ
ALKETHSHLILELWEVWARALGEWVS
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacagaacccagcaacgcttaacctactgcttggagcaactgagtaaagaagag
ctaaaagagttccagcatcggctgccaaaacaaacggtgtggccagaggccagtggcaca
aagatagcctcaagcctggtggctcagtatgggaatcaccaggcctggaacatggccctc
cacatctggaaaaagatgggcatgaagcagcttctcagccaggcccagcaagggaaggac
ctgacactgacctatgatccctcactcctcagtttcccgagcacatctaacgtggagtcc
tccagccagcccgcttctacagggtttaggccagaccatcaatcttcatctctccagatg
tccacgaagaaaacttttgtaaagaaacgtacaaagcccgggtgcagaacaagagaaact
acaataaaaacatgccagaaccagagaagagagagcccttgccatacacggtcctgggaa
actgaagatttccaccaaaaatacgcacagctgctacttttacaaaaatcttgccccaga
agccagaggtccgtggtgagagaaggaggagggcaccaggacattaaagacagaggacat
ccgattgccatccaagacttatttggccctagcccaggtagccagaagaagcctcagtta
gtcatattagagggggctgctggcattgggaagtcaacgctggccaggcaggtgaggaga
gcatggggggaaggccagctctacagggatcgcttccagcatgtcttctacttcagctgc
agagagctggcccagtgtgagcagctgagtctggctgagctcatagcaaaatatgagaat
gtctgcaaggatctcatagaggagatcctgtctcaccctgagaagctgctcttcatcctg
gatggcatagatgagccagcatgggtcttgcagaatcctaagttctatcggcactggagc
cagtcacagccagtgcacacactgctgggcagtttgttggggaaatccttacttcctcag
gcttccttgctgctcacagctcggaccacagaactacagacactcattccttccttggag
cagccacggtgggtggaagtcctgggcttctctgagtctggacggaaggaatttttctac
acatactttgcagaggaaagagaagcaatcacagcttttaccttggttgaatcaaaccca
gtgctcttgaccctgtgcctagtgccctgggtgtcctggctggtctgcgcctgcatgaaa
cagcagatggagcatgggggagacctctccctgacctcacagaccaccacagccctctgc
ctgaaatacctttcccaggctctcccagctcagcccctggggaccgggctcagagggctc
tgctcactggctgctgcagggatctgcagaaaaaagagtctgttcagtgttaaggacctc
aggaaacagaaggtacctgggtctgtcatctccactttcatgagcacgggtatccttcag
aagcagcctaactctaccaactacagctttgcccacctgtgtctccaggagttctttgca
gcgatgtcctgtgtcttggattatgaagaggaaaaggacaactgtgaaaactttaaagct
gtagaaaagctgatagaagtctatggaagacttgacctggctgaggggcccgccgtgggc
ttcttgtgtggccttctgagtgaccaggcaatggatgagatgaaaaacattgtcacctgc
tggcttcctctggagaggaggtgggagctgctgaagagggtcctagaggaagcccacctc
caacactcgtattcgcttggattgctccactgtctgtatgagattcaggatgaggagctc
ctgacacgggcaatggacagttttcaaggaacaagggttcatgtccagacagatatgatg
catccaggattccaggcagatgtgaagcacctggtggtccagacagatgtggagcttatg
gtggtcactttctgcattaagttctgccgccaggtgaaggcacttcagctggatgggggt
ggatggcaggaacaagcgctgagggtccccaggctggttctgtccaggtggaccccgatc
actgatgccacttggcaggttttcttctccactcttgagttcacagaaagcctggaggag
ctggacctaagcgggaatccaatgagctactctgcagtgcagagcctctgtaggatgctg
agacacgctaaatgtcacctaaagacattgtggctggtcagctgtggcatcacagccagc
agctgtgaggatctggcctctgtgctcagcaccaaccgcagcctgactgagctggacctg
cagctgaatgacctgggtgaccaaggggtgaggttgctgtgtgaggggctcaggaatcct
gcctgcaacctcagaatcctgaggctggactcgagctctctgaatgaccaggtgatggta
gaacttaaggcagagaatcccaagctgctcatccagagcacacggaaatcacctgtggag
gtctctactccggatctggataaaggagaaacgagtgctggcccatcctcactcaagcga
cagagactacagttagagaaagtttcaaagcaagaagctctacccgtggcacagctgaaa
ctcccccacttgcttcagtcttttccgggaggcacgctcatagcgtctcttaagattgaa
gatagcttctggggtagcacaggacctttggctactgaggtggtcgacagtaaaaggaac
ctgtaccgagttcagttccctatggctggctcctatcactggcccagtactggtcttcgc
tttgtggtgacgagggcagcgatcatagatatagaattctgtgcctggagccagttcttg
ggcaagactcccctggagcagagtcacgtggtggctgggcctctgtttgacatcaaggct
gagcagggaattgttgacactgtgtatctgcctcattttgtggctctccaaggaattcag
gacacctcaaagttccaagtggcccgctttctgaagcacggggtggttttggagacacca
gccgaagtgaagccacattgcacagttctaaaaaatcccaggttctctaccataggagtg
atgctaaaaataatccctgtcacccggcgattcctacccatcacctccatcacgttgctc
taccatcaacctcatgctgaggagcacaaattccacctttacctcatccccaacgactgc
actattcgaaaggccatagatgatgaagaaatgaagttccggtttgtgcgaatacacaag
cctccccccatgggctccctttatgtgggctctcgctataccgtgtctggttcagggact
atggaaattacacccaaggaactggagctgtgctaccggagctccacggaagcccagctc
ttctctgagatctatgtgggctgcttacaatcagggatacggctggaaataaaagacaag
aatgctgatgtagtttgggaaactgtgttgaaaccaggagatctcagacctgcatccacc
ctggtcgatgcagcccctacagttgccagacccttccggcactttgtggaccagcatcgg
gagcagctggtggcccgagtgacatcagtggaccctgtcctagacagactgttcggtcaa
gtgttgagtgaagagcagtatgagatggttcgtgctgaggccaccaatcccaacaagatg
cggaggctgttcagctacagtcagtcctgggacctggccagaaaaagtcagttctaccaa
gctctgaaggagacccattctcacctgatcctagaactctgggaggtgtgggccagggct
cttggggaatgggtatcctga
DBGET
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