KEGG   Arvicola amphibius (Eurasian water vole): 119813231
Entry
119813231         CDS       T08327                                 
Symbol
Brca1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X1
  KO
K10605  breast cancer type 1 susceptibility protein [EC:2.3.2.27]
Organism
aamp  Arvicola amphibius (Eurasian water vole)
Pathway
aamp01524  Platinum drug resistance
aamp03440  Homologous recombination
aamp03460  Fanconi anemia pathway
aamp04120  Ubiquitin mediated proteolysis
aamp04151  PI3K-Akt signaling pathway
aamp05206  MicroRNAs in cancer
aamp05224  Breast cancer
Brite
KEGG Orthology (KO) [BR:aamp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    119813231 (Brca1)
  09124 Replication and repair
   03440 Homologous recombination
    119813231 (Brca1)
   03460 Fanconi anemia pathway
    119813231 (Brca1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    119813231 (Brca1)
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    119813231 (Brca1)
  09162 Cancer: specific types
   05224 Breast cancer
    119813231 (Brca1)
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    119813231 (Brca1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:aamp01009]
    119813231 (Brca1)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:aamp04121]
    119813231 (Brca1)
   03036 Chromosome and associated proteins [BR:aamp03036]
    119813231 (Brca1)
   03400 DNA repair and recombination proteins [BR:aamp03400]
    119813231 (Brca1)
Enzymes [BR:aamp01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     119813231 (Brca1)
Protein phosphatases and associated proteins [BR:aamp01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     119813231 (Brca1)
Ubiquitin system [BR:aamp04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    119813231 (Brca1)
  Multi subunit type E3
   BRCC complex
    119813231 (Brca1)
Chromosome and associated proteins [BR:aamp03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     119813231 (Brca1)
DNA repair and recombination proteins [BR:aamp03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-core complex
     119813231 (Brca1)
    BRCA1-A complex
     119813231 (Brca1)
    BRCA1-B complex
     119813231 (Brca1)
    BRCA1-C complex
     119813231 (Brca1)
    BRCA complex
     119813231 (Brca1)
   FA (Fanconi anemia) pathway
    Downstream FA components
     119813231 (Brca1)
SSDB
Motif
Pfam: BRCT_assoc BRCT zf-C3HC4 zf-C3HC4_2 BRCT_2 zf-RING_UBOX zf-C3HC4_4 zf-C3HC4_3 zf-RING_2 zf-RING_5 RING_XB3-XBAT31 zf-ANAPC11 zf-RING_6 zf-Nse Prok-RING_4 zf-RING_10 Baculo_IE-1
Other DBs
NCBI-GeneID: 119813231
NCBI-ProteinID: XP_038184365
LinkDB
Position
4:20022898..20091782
AA seq 1802 aa
MDLPAVQIEEVQNVLHAMQKILECPICLELIKEPISTKCDHIFCKFCMLKLLNQKKGPSQ
CPLCKSEITRRSLQGSTRFSQLVEELLKITDAFELDTGIQFASSYSFSKTKNSSEPLNED
TSIVQSVGYRNRVKRLRQIESGNDNLKDSLSVQLSNLGIVRSTKKNQQPQPRKKSVYVEL
GSDSSEEIVNKSDGCSVQDQELLQITPRGAGDEASLESARKAACEFCKDVTNTEQHQCSN
KDLNPIENHATERHPEKCQSISVSNLHVEPCGTDIHASSLQHENSSLFLTEDRMNVEKAE
FYNKSKQSGFTRSQRNRWAESKETCNDRQIPSAEKKVELNADSLCESKNWNNQKSLCPED
SRATQDVPWIALNSSIQKVNEWFSKTGEMLTSEGTSARRRGLDAEAAVVLEASHDEDGHS
SSSKEMDSVASDPHRAFKCKSERDFSRPVENNIQDKIFRKTYQRKGSHPHLNHVPEIIGT
VTTEQQITQEHPFTNKLKRKRRTTCLNPEDFIKKVDLTVTQKTPENIIQGTDQTEPDGQM
MGITSNGQENEAKGNNLHTEKNADPIKSLGKESVFTAKVKPISHSISDLELELNAPSWKA
PKKNRLRRKSSIRCVLALEPVSRNPSPLACAEFQIDSFSSSGETKKNNSTLRPIGKAQLM
EDTEPAADAKKNNDPDEQIKKRRASEAYSEQQLANMAQGPVDPSPQGKEVEKPETSQMSD
GTKDLQELALGGGQGSPTERPAESSSVSLVPDTDCDTQSSVSLLEASTAGYAKTGSSLRV
PQFVASENLKEPVHGSKDARSGAVCFKHPPRHEGSHTEGTAETEESELDTQYLQNTFQVS
KRQSFALFTKPGDPQKECVTARASSMSLREVSPKVTSESEENKEKQGHKKSETSHVQAGT
ATVGLPLLHREGEPGTDPVSAGVSRLCPSSQYTNNENDLSTSGNPDIPQNSQLKQSVSPI
TSSLKTDHQKTLSEKHFEKHTLSTEKAMGNETVVQSTVHTISQSNRKNACQDADSGSINE
VSSSSENFQGQRGRNTVLPLGLMHPGVCKLSFPVGDYKYLEIKTQEGEAVGADFSPCLFS
DKLEQPMESGNIFQVCSETPDDLLDDVEIQENTSFGDGDIMEKSAVFNGSIQRREFSRIP
SPLTHASLARSLRRGPRRLESSEESECSEEEDLPCFQHLLGRISNTPELPRTRCSGVVTQ
RLSEKAAGTQAALKRGLGDCDKDNEVILVEASQEHHLSEDAKCSGSLFSSQHSGVQDSAA
HAASQDPLSNPPSRQVCRQSEDEEDFRSDKELISDGEDAGACLDDDDQEEDVMIPDSVGE
AASGYESETNLSEDCSQSDILTTQQRATMTDNLIKLQQEMAHLEAVLEQQGNQPSDHSLS
LIADPLAPKDPPDPEQNMSGTAILTSKNINENPGSRNPMYVSADKFQPQPSDSSTSDNKE
SRVGRPYPFKSPLASHRCSAHSCSGSLQNRNCPSQEEQLLQVVEMEKSLEPQTLTRQDLE
GTPYLESGISLFSSRNPESESPKEPAHVCTTSASNSAQKISERQVSESFTSPAAAHAHTA
VVETVSEITPELTSSEGRANQGISVVVSGLTLKEVMIVQKFARKYRLTLTDVITEETTHV
IMKTDAELVCERTLKYFLGIAGGKWIVSYSWVIRSIQERRLLSVHEFEVKGDVVTGRNHQ
GPKRSRESKEKLFKGLKIYCCEPFTNMPKDELERMLQLCGASVVKELSSLTRDTDAHPIV
IVQPSAWTEENGCPEIGQLCEAHLVMWDWVLDSISVYQCRDLDAYLVQNITHDYSEPQDP
SD
NT seq 5409 nt   +upstreamnt  +downstreamnt
atggatttacctgctgttcaaattgaagaagtacaaaatgtccttcatgctatgcagaaa
attctagagtgtccaatctgtttggaattgatcaaagaacccatttctacaaagtgtgat
cacatattttgcaaattttgtatgctgaaacttcttaaccagaagaaagggccttctcag
tgtcctttgtgtaagagtgaaataaccagaagaagtctgcaaggaagtacaaggtttagt
caacttgttgaagagctgctgaaaatcactgatgcttttgagctcgatacaggaatacag
tttgcaagcagttacagcttttcaaaaacgaaaaattcttctgaacctttgaatgaggac
acttctatcgtccagagtgtgggctaccgaaaccgagtcaaaagacttcggcagattgaa
tctggaaatgacaacttgaaagacagtctcagtgtccagctttctaaccttggaattgtg
agatcgacgaagaaaaatcagcagccacagcctcgaaagaagtctgtgtacgttgaatta
gggtctgactcttctgaggagatagttaataaatcagatggctgcagtgtgcaagaccag
gaattgttacagatcacccctcggggagctggagatgaagccagtctggagtctgcaaga
aaggctgcttgtgagttttgtaaggatgtaacaaatactgaacagcatcagtgcagtaat
aaagatttgaaccccattgagaatcatgcaactgaaaggcatccagaaaaatgtcagagt
atttctgtttcaaacttacatgtggagccatgtggcacagatattcatgccagctcatta
cagcatgagaacagcagtttattcctcactgaagacagaatgaatgtagaaaaggctgaa
ttctataataaaagcaaacagtctggcttcacaaggagccaacggaacagatgggctgag
agtaaagaaacatgtaatgataggcagattcccagtgctgagaaaaaggtagagctgaat
gctgattccctctgtgagagcaaaaattggaataatcagaaaagcctgtgccctgaggat
tctagagctacccaagatgttccttggatagcgctgaatagcagcattcagaaggtgaac
gagtggttttccaaaactggtgaaatgctaacttctgagggcacatctgccaggaggcgc
gggttagacgctgaggcggctgtggtgttagaagcttcacatgacgaagatggacactcc
agttcttcaaaggaaatggactcagtggcctctgatccccacagagctttcaagtgtaaa
agtgaaagagacttctccagaccagtagagaataatatccaagacaaaatattcaggaaa
acttatcagagaaagggaagccaccctcacttgaaccatgtacctgaaattataggcaca
gttactacagaacagcagataacacaagagcaccccttcacaaataaattaaaacgtaaa
aggaggactacatgccttaatcctgaggattttatcaagaaagtagatttaacagttact
caaaagactcctgaaaatataattcagggaactgaccaaacggagccagatggccaaatg
atgggcattaccagtaatggtcaagagaacgaagcaaaaggtaataatcttcatacagag
aaaaatgctgatccaataaaatcactgggaaaagagtctgttttcacagctaaagtcaaa
cctataagccacagtataagcgacttggagctagaattaaatgcccccagttggaaagca
cctaagaagaacaggctgagaaggaagtcttccatcagatgtgttctcgcactggagcca
gtcagtaggaatccaagtccacttgcttgtgctgagtttcaaattgatagtttcagtagc
agtggagaaacaaagaaaaacaattccacccttaggcccattggaaaggctcaactcatg
gaggacacagaacctgcagcagatgccaagaagaataatgatccagatgaacaaataaag
aagagaagggccagtgaggcttactcagaacagcagttagcaaacatggctcaaggacct
gtcgatcctagccctcagggaaaagaagtagagaagcctgagacaagccaaatgtctgac
ggtaccaaagacctgcaggagctggcgctgggtggagggcagggttcgcccaccgagaga
cctgccgagagcagcagtgtttcactggtccctgacactgactgtgacacgcagagcagt
gtgtcgttgttagaagccagcactgctggatatgcaaaaacaggatccagtctgcgtgtg
cctcagtttgtagcaagtgaaaacctcaaggaaccggtccatggttctaaagatgccaga
agtggcgcagtgtgcttcaagcatccaccgagacacgaaggtagccacactgaggggaca
gcagaaacggaggagagtgaacttgatactcagtatttacagaatacatttcaggtttca
aagcgccagtcatttgcattatttacaaaaccaggagatccccaaaaggagtgtgtaaca
gctcgtgcttcctctatgtccttaagggaagtgagtccaaaagtgacttctgaaagtgaa
gaaaacaaagaaaagcagggacacaaaaagtctgaaaccagccatgtccaggccgggact
gccacagtgggtttacctctgcttcatcgggaaggtgagccaggcactgatccagtctcc
gctggagtgtccaggctttgcccctcatctcaatacacaaacaatgaaaatgatctcagc
acctcaggtaaccctgacattccacaaaactcccaacttaagcagtcagtctctcccatc
acatcctccttaaaaactgaccatcagaaaaccctgtcagagaaacattttgagaaacat
acattgtcaactgaaaaggcaatgggaaatgagactgttgttcaaagtacagtgcacaca
attagccagagcaacagaaaaaacgcttgtcaagatgccgactcgggcagtattaatgaa
gtatcttccagcagtgaaaacttccaaggacaacgaggtagaaacactgtgctcccgtta
ggtcttatgcatcctggagtctgtaaattaagttttcctgtgggtgattataaatatctt
gaaataaaaacgcaggaaggtgaagctgttggtgcagacttctctccatgtctgttctca
gataagctcgaacaacccatggagagtggtaatatttttcaagtttgttcggaaacacct
gatgacctgttggatgatgttgaaatacaggaaaatactagctttggtgacggtgacata
atggagaagtctgctgtttttaacgggagtatccagagaagagagttcagtaggatccct
agccctttaacccatgcctcgctggctcggagtctccgcagagggcctaggaggttagag
tcctcagaagagagcgagtgttctgaggaggaagatctcccctgcttccagcacttactt
ggcagaataagcaatacacctgaacttcccagaactagatgtagcggtgttgtgacacag
cgtctgtctgagaaagcagcggggacccaggcagccctgaagcgtggccttggcgactgc
gataaggataatgaggtcatccttgtagaggcgtctcaggagcatcacctcagtgaggac
gccaagtgctctggcagcttgttctcttcccagcacagtggggtccaggactcagctgca
cacgcagcctcccaggatcccttgtctaatcctccttccagacaagtgtgtcgccagtct
gaggacgaggaggatttccgaagtgacaaggaactgatttcagatggcgaggacgcggga
gcgtgtctagacgatgatgaccaagaagaggacgttatgatcccagattcagtaggcgaa
gcggcatccggatacgagagtgaaacgaacctctctgaagactgctcgcagagtgatatt
ttaaccactcagcagagggctaccatgacggataacctgataaagctgcagcaggaaatg
gcccacctggaagctgtgctagagcagcaagggaaccaaccttctgaccactccctgtcc
ctcatagctgaccctcttgctcccaaagacccgccagatccagaacaaaacatgtcagga
acagcaattttaacttcaaagaacattaatgagaatcctggaagccggaatccaatgtat
gtttctgctgacaagttccagccacaaccttcagatagttctaccagtgacaataaagag
tcaagagttgggaggccttacccttttaaatctccattggcaagccataggtgctctgca
cacagctgctctgggagtcttcaaaacaggaactgcccgtctcaagaggagcagctcctt
caggttgttgaaatggaaaagtcacttgaaccacagactttaacaaggcaagatctagaa
ggaaccccatatctggaatctggaatcagccttttctctagtagaaaccctgaatctgag
tcccctaaagagccagctcatgtgtgcaccacatctgcttcaaattctgcacagaaaata
tccgagcgtcaagtttccgagtctttcacgagtccagctgctgctcatgctcacactgca
gtggtggaaactgtgagcgagataacgccggaactgacgtcttcagaaggaagagccaat
caaggaatatccgtggtggtttcaggcttgaccctcaaagaagtaatgattgtgcaaaag
tttgctagaaaataccgcctcactttaactgatgtaattactgaggagactacgcatgtt
attatgaaaacagatgctgagcttgtgtgtgaacggacactgaagtatttcctaggaatc
gcgggaggaaaatggatagttagttattcatgggtcatccggtctattcaagaaagaaga
ctgctgagtgtgcatgaatttgaagtcaaaggagatgttgttactggaagaaaccaccaa
ggtccaaagcgatccagagaatccaaggaaaagctcttcaaaggcctaaaaatctattgt
tgtgagcccttcaccaacatgcccaaagatgagctggagaggatgctgcagctgtgtggg
gcttctgtggtgaaggagctttcgtcactcacccgtgacacagatgctcatccaattgtg
atcgtacagccaagtgcctggacagaagagaatggctgccctgagattggacagctgtgt
gaggcacacctggtgatgtgggactgggtgttggacagtatatccgtctaccaatgtcgg
gatttggacgcctacctggtacagaatatcacccatgactatagtgagccacaagacccc
agtgattag

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