Arvicola amphibius (Eurasian water vole): 119813648
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Entry
119813648 CDS
T08327
Name
(RefSeq) LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing protein 1a-like
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
119813648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamp04131
]
119813648
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
aamp04054
]
119813648
Membrane trafficking [BR:
aamp04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
119813648
Pattern recognition receptors [BR:
aamp04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
119813648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
FIIND
UPA-FIIND
CARD
NLRC4_HD2
NOD2_WH
LRR_6
AAA_16
NPHP3_N
NB-ARC
AAA_14
AAA_30
Zeta_toxin
AAA_22
nSTAND3
Motif
Other DBs
NCBI-GeneID:
119813648
NCBI-ProteinID:
XP_038184972
LinkDB
All DBs
Position
4:49799528..49869882
Genome browser
AA seq
1338 aa
AA seq
DB search
MGTTQSKKASGSKEAQHRHLLLLEQHKRRQMDLELQGIKTQVKKDLMLTPTSMEFIQWMN
IRERLCMSQESWRQFQISKRIPGEWESEDSGFGSREHSSSTNTSSAGMQVLEWTDTEKLL
NTDHESQRHFRISKKELDEWEPENSGFGSKGSVPNKENDDLYKTESLKTEGLLQNFTQLQ
LLQKSCPRDWETMVGKSWNESVTENRGHLIEIQDLFQPNPDTQETPQLVVLQGAAGIGKS
TLARQVRRAWGEGQLYRDHFQHVFYFSCRELAQCKQLSLAKLIAKDQTVPPVPIRQILSH
PEKLLFILDGIDEPAWVLEDQNPELCLHWSQTQPVHRLLASLLGKSILPEASLLLTVRTT
DLNKIIPSLGQPHWVEVLGFSESGQKEYFYKYFSEKGEAIKAFNLVASDPVLSTLCMVPW
VSWLVCTCLKQQMEQGGQLSLTSKTTTALCLKYLSLVLPDHTLLTQLRGLCSLAANGICR
RRTLFSKKDLCEPGLSDCVIGTFLKIGILQKQPSTLSYSFSHLCLQEFFAAMFCILRDGD
MKIYRIVETLIEVYGREELFEAPTIRFLFGLLSKQRVGEMEKFFITRLPLDTVWETLYKA
RALPKHLDLCSLGLFHCFYETQNEGFLTQVMHNLQTIKFCDPTDMAHPVFQTNVNHLMVQ
TDVELMVFTFCIKFCRHVMRLQLSGDGQQRPTLLVPRMVLSKWIPFTDTSWQILFSILEI
TGSLKELDLSGNPMSYLALWRLCRTLRCPGCQLNTLWLVNCGLTSSHCEDLASVLSASSS
LTQLDLQLNDLGDRGVMWLCEGLRSPACNLRTLRLDQDSLSDHVMKKLWILEAKNPQLLI
SSIWKPHIPEDSDEEEMCETPISIKQQRLQSGHKHMKPQGTDDDFWGPTGPVTTEVIDRE
RNLYRVQFPVPGSYHCPNIGLSFVVTRAVTIEIGFCSWSQHLNQTPLKYSHMVAGPLFDI
KAERGAVAAVHLPHFVNLQEEQVGIVFRVAHFKEHGMVLETPXRVEQIYAVLENPSFXPV
GVLIRMIPGFVRFIPITSITLIYYRLNHKDMTFHLYLIPNDCTIRKAIDDEEIKFRFVRI
NKPPPVDSLYIGSRYIVSGSKKLTIIPKELELCYRSPAESQLFSEISVGYMGSGINLQIR
DKKNKKLIWETLLKPGDLRFALLMMPAVHKDAPALLHFVDQHREQLVARVTSVDPLLDKL
HGLVLREEEYEAVRAEATNQDKMRKLFSLSRSWTMACKDQVYRALKETHPHLIMDLFEKS
GQLFVDPDVPFWPCPACSCGMSISGNFQQSQQVYSGLGQPALMSDQSQNILTNHDTRRTG
SMGMETMRWCFPWKVSVL
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atgggaaccactcagtccaagaaggcgagtggctcaaaggaggctcagcataggcatcta
ctactcttggaacaacacaaaaggagacagatggacctggagctgcaagggatcaaaacc
caggtcaagaaggacttgatgctaactccaaccagcatggaattcattcaatggatgaat
atcagggaacgattgtgcatgagccaagagtcttggagacaatttcagatctcaaaaagg
atacctggcgaatgggaatctgaggactctggatttggaagcagagaacattcttcctcc
acaaacacaagctcagctggcatgcaggtccttgaatggacagataccgagaaactattg
aacacagaccatgagtctcagagacattttcggatatcaaagaaggaacttgatgaatgg
gaacctgagaactctggattcggaagcaaaggaagcgttccaaataaggaaaatgatgat
ctttataagacagagtccttgaaaacagagggcttgctccaaaatttcacacagctacaa
ctcctacaaaaatcttgtccaagagactgggagactatggttgggaaaagctggaatgaa
agtgtaacagagaacagaggacatctgattgagatccaagacttatttcagccaaaccca
gatacacaggaaacacctcaattagttgtattacagggggctgctggcattgggaagtca
acactggccaggcaggtgaggagagcatggggagaaggccagctctacagagatcacttc
cagcatgtcttctacttcagctgcagagagctggcccagtgcaaacaactgagtctggct
aagctcatagcaaaagaccagactgtgcccccagttcccatcaggcagatcctgtctcac
cctgagaagctgctcttcatcctggatggcatagatgagccagcatgggtcttggaagat
cagaatcctgagctgtgtctgcactggagtcagacacagcctgtgcacagacttctggcc
agtttgctggggaaatccatccttcctgaggcttccttgctgctcacagttcggaccaca
gacctgaataagatcattccttctttggggcagccacattgggtggaagtcctgggcttc
tctgagtctggacagaaggaatatttctacaaatatttttcagaaaaaggagaagcaatt
aaagctttcaacttggttgcctcagacccggttctctcaacactgtgtatggtaccctgg
gtgtcctggctggtctgtacttgtctgaagcagcagatggaacaggggggacaactctca
ctcacctcaaagaccaccacagccctctgcctgaaatacctttccctggttctcccagac
cataccctgctgacccagctcagagggctctgctccctggctgctaacgggatctgcaga
agaaggaccctgttcagtaagaaagatctctgtgaaccaggtttatctgattgtgtcatt
ggcacatttctgaagattggtatccttcagaagcagcccagcactctaagctacagcttt
tcccacttgtgtctccaggagttctttgcagcaatgttctgcatcttgagggatggtgat
atgaaaatatacagaattgtggaaacactgatagaagtgtatgggagagaagaactgttt
gaggcacccaccatacgcttcctgtttggcctgttgagtaaacaaagggtgggagaaatg
gagaagttcttcatcacccgcttgcctctggacactgtgtgggaaacactgtataaagcc
agggcattgcccaagcacctggatctctgttctctggggttgtttcactgtttttatgag
actcagaatgagggattcctgacacaggtgatgcacaatcttcaaacaataaagttttgt
gacccgacagatatggctcacccagtgttccagacaaatgtgaaccacctgatggtccag
acagacgtggagctcatggtattcactttctgtattaagttctgccgccatgtgatgagg
cttcaactgagtggggatggacagcagagaccaacacttttggtccccaggatggttctg
tcgaagtggatccctttcacagataccagttggcagattctcttctccattcttgagatc
acaggaagcctgaaggagctggacctaagtggaaatccaatgagctatttggcactgtgg
agactttgtaggaccctgagatgccctggatgtcaactaaacacattgtggcttgtcaac
tgtggcctcacatccagccactgtgaggacctggcctcagtgctcagtgccagctccagc
ctgactcagctagacctgcagctgaatgacctgggagaccgtggtgtgatgtggctgtgt
gaggggctcaggagtcctgcctgcaacctcagaaccctgaggctggaccaggactctctc
agtgaccatgtgatgaagaagctctggatcctggaggcaaagaatccacagctgctcatc
tccagcatatggaagccacatatacccgaggactcagatgaagaagaaatgtgtgagacc
ccgatctcaatcaagcagcagagactacagtcaggacataaacacatgaagccacagggg
actgatgacgacttctggggtcctacagggcctgtgactactgaggtgattgacagagag
aggaacttgtatcgagttcaattccctgtgcctggttcctaccactgtcccaacatagga
ctctcctttgtggtgacgagggcagtgaccatcgagattggattctgttcctggagccaa
cacctgaaccagactcccttgaagtacagtcacatggtggctgggcctctgtttgacatc
aaggctgagcggggagctgtggctgctgtgcatctccctcactttgtgaatctccaagag
gaacaggtgggcatcgtattccgtgtggcccactttaaagaacatgggatggtcctagaa
actccgnccagagtggaacagatatatgcagtgctggaaaacccaagcttcntcccagtg
ggagttctaataagaatgattcctggttttgtacgcttcatccccatcacttccatcaca
ctgatctactatcgtctcaatcacaaggatatgacatttcacctctacctgatccccaat
gactgcaccattcggaaggccattgatgatgaagaaataaaattccgatttgttcgaata
aacaagccacccccagtagactccctttatattggttcccgttacatcgtatctggttcc
aagaagctgacaatcatcccaaaggagttagagctgtgctaccggagccccgcggaatcc
cagctcttctctgagatctctgttggttacatgggttcagggattaatctgcaaatcaga
gacaagaagaataagaaacttatatgggaaaccttgctgaaaccaggggatctcagattt
gcactgctcatgatgcctgcagttcacaaagatgctcctgccttgctacacttcgtggac
cagcatcgggagcagctggtggcccgagtgacatcagtggaccctctcctggacaagctg
catggtctggtgctgagggaagaggaatatgaggcggtgcgagctgaagctaccaaccaa
gacaagatgcggaagctcttcagcctcagcaggtcctggaccatggcctgcaaagaccaa
gtctaccgagctctgaaggagacccatcctcacctgatcatggacctctttgagaagtca
ggacagctctttgtggacccagatgttcccttttggccttgcccagcctgttcatgtggg
atgagcatctcaggaaacttccaacagagtcagcaagtctattcaggccttggccagcct
gctctcatgagtgaccagtctcaaaacatcctgaccaaccatgatacacgcagaactggg
agcatggggatggagacaatgagatggtgctttccctggaaagtgagtgtcttatga
DBGET
integrated database retrieval system
