Arvicola amphibius (Eurasian water vole): 119813649
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Entry
119813649 CDS
T08327
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1a-like
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
119813649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamp04131
]
119813649
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
aamp04054
]
119813649
Membrane trafficking [BR:
aamp04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
119813649
Pattern recognition receptors [BR:
aamp04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
119813649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
FIIND
UPA-FIIND
NLRC4_HD2
CARD
NOD2_WH
LRR_6
NPHP3_N
AAA_16
NB-ARC
AAA_14
AAA_30
AAA_22
nSTAND3
AAA_18
Birna_VP5
Motif
Other DBs
NCBI-GeneID:
119813649
NCBI-ProteinID:
XP_038184973
LinkDB
All DBs
Position
4:49696418..49729144
Genome browser
AA seq
1146 aa
AA seq
DB search
MDLELQGPFSLSEEDWMLKIHKNKGREDLCHTASWKRKTEDLLQNYTQLLILQKSCPRGK
DTFVWKRWRKNKGEESGHLIEIQDLFGLSPDSQEESQLIVLEGAAGIGKSTLAKQVRRAW
GKGQLYRDRFQHVFYFSCRELAQYKQLSLAEFIAKDQAVPTTPIRQILSHPEKLLFILDG
IDEPAWVLEEQNPELCLHWNQHQPVHTLLGSLLKKSILPGASLLLTVRTTDIQMIIPSLG
QPHWVEVLGFSESGQKEYMHKYFTGKREANKAVSLVKSNPVLSTLCLVPWVSWLVCTCLK
QQMDQGEDLSLTSQTTTALCLKYLSQTIPVQQLRTHLRRLCSLAAEGICRRRTLFSELDL
QKQGLAEDVIAAFLKFGLLQKQTSSLTYSFAHLCLQEFFAAMSYILGDSEERYSDMESYK
IVEKLIEVYGRRDLFETPTMRFLFGLLSKNGMRELYKIFACRFPWKTWLYLQWHILEEAL
YHQPYSLGLLHCLYEIQEKKLLTDVMHNYQETRAHAPVDMLHPRFLTNMKHLVVQTDVEL
MVVTFCIKFCCHVKRLQLNDCGQQGPMLTAPRMVLSRWTPITNASWKILFYTLNYTRSLQ
ELDLSGNPMSYYALRSLCRTLRCPGCHLRTLWLVNCGLTSSCCEDLASVLSAGSSLTELD
LQLNDLGDRGVRQLCKGLRNPACNLRILWLDQASLSDQVMMKLRLLEAKNPRLLISSTWE
PHVIVPNKNPDGEEMGESPISFKQQRPQSEHRHMEALGTEDDFWSPTGSVATEVIDRERN
LYRVQIPEAGSYHCPSTGLHFVVTRAVTIEIGFCAWSQHLDQTPLQDSHMVAGPLFDIKA
ERGAVAAVHLPHFVNLQEGQVDISWFHVVHFQEHGMVLETPARVEQHCIILENPSFSPVG
VLLRIMPAVRYFIPITSVTLIYYHLNLQDVTLHLYLIPNDCTIRKAIDDEEMKFQFVRIN
KPPPLDSLYIGSRYTVSASKKLEIIPKELELCYRSPGESQLFSEIYVGHMGSGIKLQIRD
KKSSNLIWEALLKPGDLRPVPPMIPAVHKDAAAFQHFVDQHREQLVARVTSVNPLLDKLH
GLVLSEEEYEAVRAEATTQDKMRKLFSFSRSWSLDNKDRVYQALKETHHHLIVDLYEKPG
SVSMRS
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atggacctggagctacaggggcccttttctctgtcagaggaggactggatgctaaaaata
cataagaacaaaggaagagaagatctctgccacactgcatcctggaaaaggaaaactgag
gatttgctccaaaattacacacagctactaattctacaaaaatcttgcccaagaggcaag
gacacctttgtctggaaaaggtggcgtaaaaataaaggagaggagagtggacatctgatt
gagatccaagacttatttggcctaagcccagactcccaggaagagtctcaattaatagta
ttagagggagctgctggcattgggaagtcaacactggccaagcaggtgaggagagcatgg
gggaaaggccagctctacagggatcgcttccagcatgtcttctacttcagctgcagagag
ctggcccagtacaagcaactgagtctggctgagttcatagcaaaagaccaggctgtaccc
acaactcccatcaggcagatactgtctcaccctgagaagctgctcttcatcctagatggc
atagatgagccagcatgggtcttggaagaacagaatcctgaactctgtctacactggaac
cagcatcagcctgtgcacacactgctgggcagtttgctcaagaaatccatcctgcctggg
gcttccttgctgctcacagttcggaccacagatattcaaatgataattccttctttgggg
cagccacattgggtggaagtcctgggattctctgagtctggacagaaggaatatatgcac
aaatatttcacaggaaaaagagaagcaaacaaagctgttagcttggttaaatcaaaccca
gtgctctcaacactatgcctggtgccctgggtgtcctggctggtctgcacctgcctgaag
cagcagatggatcagggagaagacctctccctgacctcacagaccaccacagccctctgc
ctgaaatacctttcccagacaataccagtccagcaactcaggacccatctcagaagactc
tgctcactggctgctgaggggatctgccggagaaggaccctgttcagcgaattagatctc
cagaagcaaggtttagctgaggatgtcattgccgctttcctgaagtttggtctccttcaa
aagcaaaccagctctctgacttacagttttgcccacttgtgtctccaggaattctttgca
gcaatgtcctacatcttgggcgatagtgaggagagatacagtgatatggaaagctacaaa
atcgtggaaaaactgatagaagtgtatggaagacgagacctgtttgagacacccaccatg
cgcttcctatttggtcttttaagtaaaaacggaatgagagagttgtataagatctttgcc
tgcaggtttccttggaagacatggttgtacctgcagtggcacatcctagaagaagccctg
taccatcaaccatattccctgggtttactccattgtctgtatgagattcaggagaaaaag
ctcctgacagatgtgatgcacaactatcaagaaacgagggcacatgccccagtggatatg
ctacacccaaggttcctgacaaacatgaagcacctggtggtccagacagacgtggagctc
atggtggtcaccttctgtattaagttctgctgccatgtgaagaggcttcagctgaacgat
tgtggacaacagggaccaatgctgacggcccccaggatggttctgtccaggtggacccct
ataactaatgccagttggaagattcttttctacactcttaactataccagaagcctgcag
gagctggacctaagtgggaatccaatgagctactatgcactgcggagtctttgtaggaca
ctgagatgccctggatgtcatcttagaacattgtggcttgtcaactgtggcctcacatcc
agctgctgtgaggacctggcctcagtgctcagtgccggctccagcctgactgagctagac
ctgcagctgaatgacctgggagaccgtggtgtgaggcagctgtgtaaggggctcaggaat
cctgcctgcaacctcagaattctgtggctggaccaggcctctctcagtgaccaggtgatg
atgaagctcaggctcctagaggcaaagaatccacgcctgctcatctccagcacatgggag
ccacatgtgatagtccctaataagaacccggatggagaagaaatgggtgagagcccaatc
tcattcaagcaacagagaccacagtcagaacacagacacatggaagcactggggactgaa
gatgacttctggagccctacaggatctgtagctactgaggtgattgacagagaaaggaac
ctgtacagagttcaaatccctgaggctggttcctaccactgtcccagcacaggactccac
tttgtggtgacgagggcagtgaccatcgagattggattctgtgcctggagccaacacctg
gaccagactcccttgcaggacagtcacatggtggctgggcctctgtttgacatcaaggct
gagcggggagctgtggctgctgtgcatctccctcactttgtgaatctccaagagggacag
gtggacatctcctggttccatgtggtccactttcaagaacatgggatggtcctagaaacg
ccagccagggtagagcaacactgcataatcttggaaaacccaagcttctccccagtggga
gttctactgagaattatgcctgctgtcagatatttcatccccatcacttctgtcacgttg
atctactatcacctcaatctccaggatgtcacccttcatctctacctgatccccaatgac
tgcaccattcggaaggccattgatgatgaagaaatgaagtttcagtttgttcgaataaac
aagccacccccactagattctctttatattggctcccgctacacagtgtctgcttccaag
aagctggaaatcatccctaaggaactggagctgtgctatcgtagccccggggaatcccag
ctcttctctgagatctacgttggacacatgggttcagggattaagctgcaaatcagagac
aagaagagtagcaatctcatatgggaagccttgctgaaaccaggggacctcagacctgta
ccacccatgatccctgcagttcacaaagatgctgctgccttccaacactttgtggaccag
catagggagcagctggtggcccgagtgacatcagtgaaccctctcttggacaaactgcat
ggtctggtgctgagtgaagaggagtatgaggcagtgcgggctgaagccaccacccaagac
aagatgcggaagctcttcagctttagccggtcctggagcttggacaacaaagatcgagtg
taccaagctctgaaggagacccatcatcacctgatcgtggacctctatgagaagccagga
agtgtctctatgagatcttga
DBGET
integrated database retrieval system
