Arvicola amphibius (Eurasian water vole): 119814291
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Entry
119814291 CDS
T08327
Symbol
Pcdhgc4
Name
(RefSeq) protocadherin gamma-C4
KO
K16497
protocadherin gamma subfamily C
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aamp04515
]
119814291 (Pcdhgc4)
Cell adhesion molecules [BR:
aamp04515
]
Cadherins
Protocadherins
119814291 (Pcdhgc4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
119814291
NCBI-ProteinID:
XP_038185776
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All DBs
Position
5:114745293..114747905
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AA seq
870 aa
AA seq
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MPSKVRSWVEIWWGATLLFLFCHLGYVCGQIRYPVPEESQEGTFVGNVAQDFLLDTESLS
ARRLQVAGEVNQRHFRVDLDSGALLIKNPIDREALCGLSASCIVPLEFVTEGPLEMYRAE
VEIVDVNDHAPRFPRQQLDLEIGEAAPPGQRFPLEKAQDADVGSNSISSYRLSSNEHFAL
DVKKRSDGSLVPELLLEKPLDREKQSDYRLVLTAVDGGNPPRSGTAELRVSVLDVNDNAP
AFQQSSYRISVLESAPAGMVLIQLNASDPDLGPSGNVTFSFSGHTPDRVRNLFSLHPTTG
KLTLQGPLDFESESYYEFDVRARDGGSPAMEQHCSLRVDLLDVNDNAPHITVTSELGTLP
ESAEPGTVVALISVQDPDSGSNGDVSLRIPDHLPFALKSAFRNQFSLVTAGPLDREARSS
YDIMVTASDAGNPPLSTHRTIFLNISDVNDNPPSFFQRSHEVFVPENNRPGDLLCSLAAS
DPDSGLNALISYSLLEPRNRDVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQARDR
GSPPLSSTVTVRLFVLDLNDNAPAVLRPRARPGSLCPQALPPSVGAGHLVTKVTAVDLDS
GYNAWVSYQLLEAPDPSLFAVSRYAGEVRTAVPIPADLPPQKLVIVVKDSGSPPLSTSVT
LLVSLEEDTHPVVPDLRESSAPREGESRLTLYLAVSLVAICFVSFGSFVALLSKCLRGAA
CGVTCFPAGTCACLSRSRRREGLPPSNGILRIQLGSEDPIKFVDVGGHSHGCTPLASAPT
RSDSFMMVKSPSAPMAGEPVRPSCPPSDLLYGLEVRPLQAQPMLGGYCDPDMWLGPLPES
PDLSGRAHSDVTIFVSINCVANAVLDKCLS
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcaaggtgagaagctgggtagaaatttggtggggggctacccttttgttcctc
ttttgccacctgggctacgtttgtgggcagattcgctacccggtcccagaggagtcacag
gaagggacttttgtagggaatgtcgcccaagattttctgctggatacagagagtctgtca
gctcgcaggctgcaggtcgctggagaggtgaaccaaagacacttccgtgtggatttggac
agcggagccctgctaatcaaaaatccaatcgatcgagaggcactgtgtgggctcagtgcc
agctgcatcgtgcccctggagtttgtaaccgaagggcctttggaaatgtaccgagcagag
gttgagatcgtagatgtgaatgatcacgccccccgatttccgcggcagcagttggacttg
gaaatcggggaagcagctccgccaggacagcgtttccccttggaaaaggcacaggatgca
gatgtggggagcaattccattagcagctacagactaagctccaatgaacactttgccctg
gatgtcaagaagcgcagcgacggcagcttggtcccagagcttcttctggagaagcctttg
gatcgtgagaagcaatcggactaccgcctggtgctaactgctgtggatggagggaacccc
cctagatctggcaccgcggagctccgggtgtcagtgctggatgtgaatgacaacgcccca
gccttccagcaatccagttacaggatcagcgtgttggagagtgcgccagcgggcatggtg
ctcattcagctcaacgcctcggacccagacttgggacctagtggtaacgtcaccttttct
ttcagtggtcacacccctgatcgggtgagaaacctctttagccttcatcccacgactgga
aagcttacccttcaggggcctctagactttgagagtgagagttactatgaatttgatgtg
agggctcgcgatgggggctctccagccatggagcaacattgcagccttagggtggatctc
ctagatgtaaatgacaatgccccccacatcacagtgacctcggagctgggaactctacca
gagagtgcagaacctggcactgtggtggcactcatcagtgtgcaggaccctgactctggg
tcaaatggagatgtgagcctccgcatccctgaccacttaccatttgccctcaagtctgcc
ttcaggaaccagttctccctcgtgacagctggacccttggatcgagaggctaggtctagt
tatgacatcatggttactgcttctgatgctgggaaccctcccctgagtacccacaggact
attttcctcaatatttcagatgtgaatgataacccaccctctttcttccagaggtcacat
gaggtattcgttcctgagaacaatcgcccaggggacctgctttgttcccttgcagcctct
gaccctgactctggcttaaacgcactaatctcatactctcttttagagcccagaaatcga
gatgtgtctgcttcttccttcatttctttgaacccccagacaggagctgttcacgccact
agatcgtttgactacgagcagacccagaccctgcagtttgaggtgcaggccagggacagg
ggcagcccgcccctcagcagcactgtcacagtgcgcctgtttgtgctggacctcaacgac
aacgccccagccgtgctgcgccctcgggccagacccggttccttatgtccacaagcattg
cctccatcagttggtgctgggcacctagtcacaaaggtgacagctgtggacttggattca
ggttacaatgcctgggtttcctatcagctcctggaggccccggatcccagcctctttgct
gtctccagatatgcgggggaagtacggacagctgttcccatcccagctgacctcccacct
cagaagctggtcattgtggtgaaggacagcggtagcccaccactctctacctctgttact
ctcctggtgtctttagaggaagacacccatccagttgtccccgatcttcgagaatcgtca
gctcccagagaaggagaatcccgtctaacgctctacttggctgtgtccttagtggccatc
tgctttgtctcctttggttctttcgtggcactgctctcgaagtgtcttcgcggggctgcc
tgtggagtgacatgctttcctgctggcacctgtgcctgtctcagcagatctcggaggagg
gaggggcttcctccttccaatgggatcctccgaatccagctagggtcggaagatcctatc
aagtttgttgatgtgggaggccactctcatggctgtacaccattggcttccgcacccact
cggagtgacagcttcatgatggtgaagtcacccagtgcacctatggcaggggagcctgtg
cgcccaagctgtccaccctctgatcttctctatgggctagaggtgagacctttgcaggct
cagccaatgcttgggggttattgtgatccagacatgtggctgggcccattgccagagagt
cctgacctctctggaagagcccacagtgatgtcaccatttttgtgagtattaactgtgtt
gcaaatgctgtgctcgacaagtgcctgagttga
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