Arvicola amphibius (Eurasian water vole): 119814660
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Entry
119814660 CDS
T08327
Symbol
Fbn1
Name
(RefSeq) fibrillin-1
KO
K06825
fibrillin 1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04350
TGF-beta signaling pathway
aamp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
119814660 (Fbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119814660 (Fbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
aamp00536
]
119814660 (Fbn1)
Glycosaminoglycan binding proteins [BR:
aamp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119814660 (Fbn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
FXa_inhibition
hEGF
EGF
TB
EGF_3
Plasmod_Pvs28
Fibrillin_U_N
EGF_FBN_1st
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
119814660
NCBI-ProteinID:
XP_038186527
LinkDB
All DBs
Position
5:50235743..50441228
Genome browser
AA seq
2871 aa
AA seq
DB search
MRRGRLLEVALAFTLLLASYTSHGADTNLEAGNPKETRANRAKRRGGGGHDALKGPNVCG
SRYNAYCCPGWKTLPGGNQCIVPICRHSCGDGFCSRPNMCTCPSGQISPSCGSRSIQHCN
IRCMNGGSCSDDHCLCQKGYVGTHCGQPVCESGCLNGGRCVAPNRCACTYGFTGPQCERD
YRTGPCFTVVSNQMCQGQLSGIVCTKTLCCATVGRAWGHPCEMCPAQPHPCRRGFIPNIR
TGACQDVDECQAIPGLCQGGNCINTVGSFECKCPAGHKFNEVSQKCEDIDECSTIPGVCD
GGECTNTVSSYFCKCPPGFYTSPDGTKCIDVRPGYCYTALTNGRCSNQLPQSITKMQCCC
DAGRCWSPGVTVAPEMCPIRSTEDFNKLCSVPLVIPGRPEYPPPPIGPPLQPVPPGFTPG
SVIPVPRPPPEYPYPSPSREPPRVLPFNVTDYCQLVRYLCQNGRCIPTPGSYRCECNKGF
QLDIRGECIDVDECEKNPCTGGECINTQGSYTCHCRAGYQSTLTRTECRDIDECLQNGRI
CNNGRCINTDGSFHCVCNAGFHVTRDGKNCEDMDECSIRNMCLNGMCINEDGSFKCICKP
GFQLASDGRYCKDINECETPGICMNGRCVNTDGSYRCECFPGLAVGLDGRVCVDTHMRST
CYGGYRRGQCVKPLFGAVTKSECCCANTEYAFGEPCQPCPAQNSAEYQALCSSGPGMTSA
GTDINECALDPDICPNGICENLRGTYKCVCNSGYEVDITGKNCVDINECVLNSLLCDNGQ
CRNTPGSFVCTCPKGFVYKPDLKTCEDIDECESSPCINGVCKNSPGSFICECSPESTLDQ
TKTICIETIKGTCWQTVIDGRCEININGATLKSECCSSLGAAWGSPCTICQVDPICGKGF
SRIKGTQCEDINECEVFPGVCKNGLCVNSRGSFKCECPSGMTLDATGRICLDIRLETCFL
RYDDEECTLPIAGRHRMDACCCSVGAAWGTEECEECPVRNTPEYEELCPRGPGFATKDIT
NGKPFFKDINECKMIPSLCTHGKCRNTIGSFKCRCDSGFALDSEERNCTDIDECRISPDL
CGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRNPLLCRGGVCHNTEGSYRCEC
PPGHQLSPNISACVDINECELSANLCPNGRCVNLIGKYQCACNPGYHSSPDRLFCVDIDE
CSIMNGGCETFCTNSEGSYECSCQPGFALMPDQRSCTDIDECEDNPNICDGGQCTNIPGE
YRCLCYDGFMASEDMKTCVDVNECDLNPNICLSGTCENTKGSFICHCDMGYSGKKGKTGC
TDINECEIGAHNCGRHAVCTNTAGSFKCSCSPGWIGDGVKCTDLDECSNGTHMCSQHADC
KNTMGSYRCLCKDGYTGDGFTCTDLDECSENLNLCGNGQCLNAPGGYRCECDMGFVPSAD
GKACEDIDECSLPNICVFGTCHNLPGLFRCECEIGYELDRSGGNCTDVNECLDPTTCISG
NCVNTPGSYTCDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKA
SCCCSLGKAWGTPCELCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQGG
KCINTFGSFQCRCPTGYYLNEDTRVCDDVNECETPGICGPGTCYNTVGNYTCICPPDYMQ
VNGGNNCMDMRRSLCYRNYYADNQTCDGELLFNMTKKMCCCSYNIGRAWNKPCEQCPIPS
TDEFATLCGSQRPGFVIDIYTGLPVDIDECREIPGVCENGVCINMVGSFRCECPVGFFYN
DKLLVCEDIDECQNGPVCQRNAECINTAGSYRCDCKPGYRLTSTGQCNDRNECQEIPNIC
SHGQCIDTVGSFYCLCHTGFKTNADQTMCLDINECERDACGNGTCRNTIGSFNCRCNHGF
ILSHNNDCIDVDECATGNGNLCRNGQCVNTVGSFQCRCNEGYEVAPDGRTCVDINECVLD
PGKCAPGTCQNLDGSYRCICPPGYSLQQDKCEDIDECVEEPEICALGTCSNTEGSFKCLC
PEGFSLSSTGRRCQDLRMSYCYAKFEGGKCSSPKSRNHSKQECCCALKGEGWGDPCELCP
TEPDEAFRQICPFGSGIIVGPDDSAVDMDECKEPDVCKHGQCINTDGSYRCECPFGYILE
GNECVDTDECSVGNPCGNGTCKNVIGGFECTCEEGFEPGPMMTCEDINECAQNPLLCAFR
CVNTYGSYECKCPVGYVLREDRRMCKDEDECAEGKHDCAEKQMECKNLIGTYMCICGPGY
QRRPDGEGCVDENECQTKPGICENGRCLNTLGSYTCECNDGFTASPTQDECLDNREGYCF
TEVLQNMCQIGSSNRNPVTKSECCCDGGRGWGPHCEICPFEGTVAYKKLCPHGRGFMTNG
ADIDECKVIHDVCRNGECVNDRGSYHCICKTGYTPDITGTSCVDLNECNQAPKPCNFICK
NTEGSYQCSCPKGYILQEDGRSCKDLDECATKQHNCQFLCVNTIGGFTCKCPPGFTQHHT
ACIDNNECTSDINLCGSKGICQNTPGSFTCECQRGFSLDQSGASCEDVDECEGNHRCQHG
CQNIIGGYRCSCPQGYLQHYQWNQCVDENECLNAHVCGGASCHNTLGSYKCMCPTGFQYE
QFSGGCQDINECGSSQAPCSYGCSNTEGGYLCGCPPGYFRIGQGHCVSGMGMGRGGPEPP
ASGEMDDNSLSPEACYECKINGYPKRGRKRRSTNETDASDIQDGSETEANVSLASWDVEK
PASFAFNISHISHKVRILELLPALTTLTNHNRYLIESGNEDGFFKINQKEGVSYLHFTKK
KPVAGTYSLQISSTPLYKKKELNQLEDRHDKDYLSGELGDNLKMKIQILLH
NT seq
8616 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgaggccggctgctggaggtcgcgctggcgttcaccctgctcctcgcgtcctac
acgagccacggggcggacactaatctggaggctgggaatccgaaggagaccagagctaac
cgagccaagagaagaggcggcggaggacacgatgcgctgaaaggacccaatgtctgcgga
tcacgttataacgcgtactgttgtcctggatggaaaaccttgcctggtggaaatcagtgc
attgttcccatttgccggcattcctgtggggatggattctgctcgaggccaaatatgtgc
acttgcccgtccggtcagatatcgccttcctgtggctccagatccatccaacactgtaac
atccgctgcatgaatggagggagctgcagcgatgaccactgtctctgccagaagggatac
gtcggcacgcactgtggacagcctgtctgtgaaagtggctgtctcaacggagggaggtgt
gtggccccaaatcggtgtgcatgcacatacggctttactggaccccagtgtgaaagagat
tacagaacaggcccgtgttttactgtggtcagcaaccagatgtgccagggacagctcagc
gggattgtctgcaccaaaacactctgctgtgccacagtgggccgagcctggggccacccc
tgtgagatgtgtcctgcccagcctcacccctgccgccgtggcttcattcccaacatccgc
actggagcttgtcaagatgtggacgagtgccaggctatccccgggctttgtcaaggagga
aattgcattaacactgttgggtcttttgagtgcaaatgccctgctggacacaaatttaat
gaagtgtcacaaaaatgtgaagatatcgacgagtgcagcaccattcccggagtctgtgac
ggcggagagtgcacaaacacagtgagcagttacttctgcaaatgtcccccgggattttac
acctctcctgatggcaccaaatgcatagatgttcgccctggctactgctacaccgccctg
acaaacggacgctgctctaaccagctgcctcagtccatcaccaaaatgcagtgctgttgt
gacgctggccggtgctggtctccgggggtcaccgttgcccccgagatgtgtcccatcaga
tcaactgaggatttcaacaagctgtgctctgtccctctggtcattcctgggagaccagaa
taccctccgccgcccattggccctccacttcagcccgttcctccaggctttactcctggg
tctgtgattccagtcccccggccaccaccagagtatccgtatccatccccatcgcgtgag
ccaccaagggtactgcctttcaacgttactgactactgtcaattggtccgctatctctgt
caaaatgggcgctgcattccaaccccgggcagctaccgttgtgagtgcaacaagggtttc
cagctggacatccgcggggagtgcatcgatgtggacgagtgtgagaaaaacccctgtact
ggtggagaatgtatcaacacccagggctcctacacctgccactgccgagctggctaccag
agcacactcaccaggaccgagtgcagagacattgacgagtgtctgcagaacggccggatc
tgcaacaatggccgctgcatcaacacggacggcagcttccactgcgtgtgtaatgcgggc
ttccacgtcactcgggacggaaagaactgtgaagacatggatgagtgcagcatcagaaac
atgtgtctgaacgggatgtgcattaacgaagacggcagtttcaagtgtatttgcaaacct
ggcttccagctggcatcggacggccgctactgcaaagatatcaatgaatgtgaaacccct
gggatctgcatgaacgggcgctgtgtgaacactgacggctcctacagatgcgagtgcttc
ccaggactggctgtgggtctagatggacgagtgtgtgttgacacacacatgcggagcaca
tgctacgggggatacaggagaggccagtgtgtgaagccattgtttggcgctgttaccaaa
tccgaatgctgttgtgccaacaccgagtatgcgtttggggagccctgccaaccatgtcct
gcgcagaattcagcggaataccaggcactctgcagcagtgggccgggcatgacctccgca
ggcactgatataaacgaatgtgcattagatcctgatatctgcccaaatggaatttgtgaa
aatctccgtggaacctacaaatgtgtatgcaattcaggatatgaagtagacataactggg
aaaaactgtgtcgatattaatgaatgtgtgctcaacagtctcctttgtgacaacggacaa
tgtagaaacacccctggaagttttgtctgcacctgccccaaaggatttgtgtacaaacct
gacctaaaaacctgtgaagacatcgatgaatgcgagtccagtccgtgcattaatggagtc
tgcaagaacagccctggatcttttatttgtgaatgttctcctgaaagtactttggatcaa
acaaaaaccatctgcatagaaaccatcaagggcacttgttggcagactgtcattgacggt
cggtgtgagatcaatatcaatggagccaccttgaagtccgaatgctgctcttcccttggt
gctgcctgggggagcccctgtaccatttgtcaagttgatcccatatgtggtaaagggttc
tcacggattaaaggcacacagtgtgaagatatcaatgaatgtgaagtgttcccaggagtg
tgcaaaaacggcctgtgtgtcaactccaggggttcattcaagtgcgagtgtcccagtggg
atgaccctggatgccacaggaagaatctgccttgacatccgcctggagacctgcttcctg
aggtacgacgatgaggagtgcaccctgcccatcgctggccggcaccgcatggatgcctgc
tgctgctccgttggggcagcctgggggactgaagagtgcgaggaatgtccagtgaggaac
accccggagtatgaggagctctgtccccgaggacccgggtttgccaccaaagacattacg
aatgggaaacccttcttcaaagatatcaatgagtgcaagatgataccaagcctctgtacc
catggcaagtgcagaaacaccatcggcagcttcaagtgcaggtgcgacagcggctttgct
ctggactctgaagagaggaactgcacagacattgatgagtgccgcatatctcctgacctc
tgcggccgaggccagtgtgtgaacaccccaggcgacttcgaatgcaagtgtgacgagggc
tatgagagtggattcatgatgatgaagaactgcatggatattgatgaatgccagagaaat
cctctcctgtgccgaggaggcgtttgccacaacacagagggaagttatcgctgtgaatgc
cctcctggtcaccaactgtccccaaacatctccgcgtgcgttgacatcaacgagtgtgaa
ctgagcgcaaacctctgtcccaatggccgttgtgtgaacctcatagggaagtatcagtgt
gcctgtaacccgggttatcactcgtctccggataggctcttctgtgttgacatcgatgaa
tgcagcataatgaatggtggctgtgagaccttctgcaccaactctgaaggcagctacgag
tgcagctgtcagccagggttcgcactgatgccagatcagagatcgtgcacagacattgat
gagtgtgaagataaccccaatatctgtgatggtggtcagtgtacaaacatacctggagag
tacaggtgtctgtgctatgatgggttcatggcgtctgaagacatgaagacttgtgtagat
gtcaatgaatgtgacctgaatccgaatatctgcctcagcgggacctgtgagaacactaag
ggctcgtttatctgccactgtgatatgggctattcagggaaaaaaggaaaaacgggctgt
acagatatcaatgaatgtgagatcggagcccacaactgtggcagacatgctgtatgcacc
aacacagcggggagcttcaaatgcagctgcagtcccgggtggattggtgacggcgttaag
tgcacagatctggacgagtgctctaatggaacccacatgtgcagccaacacgcagactgt
aagaacaccatggggtcgtaccgctgtctctgtaaggacggctacacgggtgatggcttc
acctgcacagacctcgacgagtgctccgagaacctgaacctctgtggcaacggccagtgc
ctcaacgcccctggcgggtaccgctgtgaatgcgacatgggcttcgtgcccagtgctgat
gggaaggcctgtgaagatatcgatgagtgctccctccccaacatctgtgtctttgggacg
tgtcacaatctcccaggcctttttcgttgtgagtgcgagattggctacgaactggaccga
agcggtgggaactgcacagatgttaatgagtgtctggatccaacgacctgtatcagtggg
aactgtgtcaacaccccaggcagctacacatgcgactgtccgcctgattttgagctgaac
ccaactcgagttggctgtgtcgatactcggtctggaaactgttatctggatatccggccc
cgaggagacaatggtgatacagcctgtagcaatgaaatcggagttggtgtttccaaggct
tcctgctgttgttcgctgggtaaagcctggggaactccgtgtgagctgtgtcctgctgtg
aacacatctgagtataaaattctttgccctggaggagaaggttttcgtccaaaccccatc
actgttatattggaagacatcgatgagtgccaggagcttccagggctgtgccaaggtggg
aagtgcatcaacacctttggcagcttccagtgtcgctgtccaactggctactacctgaac
gaagacacacgtgtgtgtgatgatgtaaatgaatgtgagactcccggaatctgcggtccg
gggacatgttacaacaccgttggcaactatacctgcatctgccctccagactacatgcaa
gtgaacgggggaaacaattgcatggacatgagaagaagcctgtgctaccgaaactattat
gccgacaaccagacctgtgacggggaactcctgttcaacatgaccaagaagatgtgctgt
tgctcctacaacattggcagagcctggaataagccctgtgaacagtgtcccatccccagc
acagatgagtttgctaccctctgtggaagccaaaggccaggcttcgtcattgacatttac
actggtctacccgtggatattgatgagtgccgggagatcccgggggtctgtgaaaacgga
gtgtgcatcaacatggttggcagcttccggtgtgagtgtcccgtggggttcttctataat
gacaagctgctcgtttgtgaagatatcgatgagtgtcagaacggccccgtgtgccagcgc
aacgctgaatgcatcaacactgcaggcagctaccgctgcgactgcaagccgggctaccgc
ctcacctccaccgggcaatgcaacgatcgcaacgagtgtcaagaaatccccaacatatgc
agccacgggcagtgcatcgacacagtgggaagcttctattgcctttgtcacaccggcttc
aagacaaatgcagatcaaaccatgtgcctggacataaacgagtgcgagagagacgcctgt
gggaatgggacttgcagaaatacaatcggctccttcaactgccgctgcaatcatggcttc
atcctttctcacaacaatgactgcatagatgttgatgaatgcgcaactggaaatgggaac
ctgtgtagaaatggccagtgtgtcaacacagtggggtccttccagtgcaggtgcaatgag
ggctacgaggtggctccagatggcaggacctgtgtggacatcaacgaatgtgttctggat
cctgggaaatgtgcccctggaacctgtcagaacttggatggctcctacagatgtatttgc
ccacctggatacagcctacagcaagacaaatgtgaagatattgatgagtgtgtggaagaa
ccagaaatctgtgccttggggacctgcagcaacacggagggcagcttcaagtgtctgtgt
ccagaagggttctccctgtcctcgactggaagaaggtgccaagatctgcgaatgagctac
tgttacgccaagtttgagggtgggaagtgttcatcgcccaaatccaggaaccattccaaa
caggaatgctgctgtgctttgaagggagaaggctggggggacccttgtgagctgtgcccc
actgagccagatgaggctttccgccagatctgcccctttggaagtgggatcatcgtgggc
cctgatgactcagcggttgatatggatgagtgcaaagagcccgatgtctgtaaacatgga
caatgcatcaacacagacggctcctatcgctgcgagtgcccgtttggttatattctagaa
gggaatgaatgtgtggatacggatgagtgttccgtgggcaatccttgtggaaacgggacc
tgcaagaatgtgattggaggattcgaatgtacctgtgaggagggattcgagcctggccca
atgatgacatgcgaagatataaatgagtgtgcccagaatcctctgctctgtgccttccgg
tgcgtaaatacctatgggtcctacgaatgcaagtgccctgttggctacgttctgcgcgag
gacaggaggatgtgcaaagatgaggatgagtgtgccgaaggaaaacacgactgtgctgag
aagcaaatggagtgcaagaacctcataggcacctacatgtgcatctgtggccctgggtac
cagcgaagacctgatggagagggctgtgtagatgagaacgagtgtcagaccaagcctggg
atctgtgagaatgggcgttgtctcaacaccctggggagctacacctgtgagtgtaacgat
ggcttcacagccagccccacacaagatgagtgcttggacaaccgggaagggtattgcttc
acagaggtcctacaaaacatgtgccagattggctcgagcaacaggaaccccgtcaccaag
tccgagtgctgctgtgatggaggaagaggctggggaccccactgtgagatctgccctttc
gagggcactgtggcttacaagaaactgtgtccccatggccgcggattcatgaccaatgga
gcagatattgatgagtgcaaggttattcacgatgtttgccgaaacggggagtgtgtcaat
gacagagggtcgtatcattgcatctgtaaaactggctacacaccagatataacagggact
tcctgtgtggatctgaacgagtgcaaccaggctcccaaaccctgcaattttatatgcaaa
aacacagaagggagttaccagtgctcctgcccgaaaggctatattctgcaagaggatggg
aggagctgcaaagatctcgatgaatgtgcaaccaagcagcacaactgccagttcctgtgt
gttaacaccattggtggcttcacatgcaaatgccctcctgggtttacccagcaccacact
gcctgcatagataacaatgagtgcacatctgacatcaacctgtgtgggtccaagggcatc
tgccagaacactccgggaagcttcacctgtgaatgccagcgggggttctcgctcgaccag
agcggtgccagctgtgaagatgtggacgaatgtgagggcaaccaccgctgccaacacggc
tgccagaacatcatcggaggctacaggtgcagctgcccgcagggctacctccagcactac
cagtggaaccagtgtgtagatgagaacgaatgtttgaacgcacacgtctgtgggggtgcc
tcctgccacaacaccctggggagttacaagtgtatgtgtcccaccggcttccagtatgaa
cagttcagcggaggctgccaggacatcaacgagtgtggctcgtcgcaggccccctgcagt
tacggctgctccaatactgagggtggctacctgtgtggctgtcctccagggtacttccgg
ataggccaagggcattgtgtttctggaatgggcatgggcagaggaggcccagagccacct
gccagcggtgagatggatgacaattcactgtccccagaagcctgctatgaatgtaagatc
aatggctaccccaaacgaggcaggaaacggagaagcacaaacgaaacggacgcctcggac
atccaggatgggtctgagacggaagccaacgtgagcctcgcgagttgggatgtggagaag
cctgctagctttgctttcaatatttcccacatcagccacaaggtccgaatcttagaactc
ctgccggcccttaccactctgacgaaccacaacagatacttgattgaatccggaaatgaa
gatggcttctttaaaatcaaccagaaagaaggggtcagctacctccacttcaccaagaag
aagccagtagccggaacctactccttacaaatcagcagtaccccactttataaaaagaaa
gaacttaaccagttagaggacaggcatgacaaagactacctcagcggagaactgggcgat
aacctgaagatgaaaattcagatcctgcttcattaa
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integrated database retrieval system
