KEGG   Arvicola amphibius (Eurasian water vole): 119814858
Entry
119814858         CDS       T08327                                 
Symbol
Traf6
Name
(RefSeq) TNF receptor-associated factor 6
  KO
K03175  TNF receptor-associated factor 6 [EC:2.3.2.27]
Organism
aamp  Arvicola amphibius (Eurasian water vole)
Pathway
aamp04010  MAPK signaling pathway
aamp04064  NF-kappa B signaling pathway
aamp04120  Ubiquitin mediated proteolysis
aamp04140  Autophagy - animal
aamp04144  Endocytosis
aamp04380  Osteoclast differentiation
aamp04620  Toll-like receptor signaling pathway
aamp04621  NOD-like receptor signaling pathway
aamp04622  RIG-I-like receptor signaling pathway
aamp04657  IL-17 signaling pathway
aamp04722  Neurotrophin signaling pathway
aamp04936  Alcoholic liver disease
aamp05132  Salmonella infection
aamp05133  Pertussis
aamp05135  Yersinia infection
aamp05140  Leishmaniasis
aamp05142  Chagas disease
aamp05145  Toxoplasmosis
aamp05152  Tuberculosis
aamp05160  Hepatitis C
aamp05161  Hepatitis B
aamp05162  Measles
aamp05168  Herpes simplex virus 1 infection
aamp05169  Epstein-Barr virus infection
aamp05170  Human immunodeficiency virus 1 infection
aamp05171  Coronavirus disease - COVID-19
aamp05200  Pathways in cancer
aamp05222  Small cell lung cancer
aamp05235  PD-L1 expression and PD-1 checkpoint pathway in cancer
aamp05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:aamp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    119814858 (Traf6)
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    119814858 (Traf6)
   04064 NF-kappa B signaling pathway
    119814858 (Traf6)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    119814858 (Traf6)
   04140 Autophagy - animal
    119814858 (Traf6)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    119814858 (Traf6)
   04621 NOD-like receptor signaling pathway
    119814858 (Traf6)
   04622 RIG-I-like receptor signaling pathway
    119814858 (Traf6)
   04657 IL-17 signaling pathway
    119814858 (Traf6)
  09156 Nervous system
   04722 Neurotrophin signaling pathway
    119814858 (Traf6)
  09158 Development and regeneration
   04380 Osteoclast differentiation
    119814858 (Traf6)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    119814858 (Traf6)
   05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
    119814858 (Traf6)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    119814858 (Traf6)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    119814858 (Traf6)
   05161 Hepatitis B
    119814858 (Traf6)
   05160 Hepatitis C
    119814858 (Traf6)
   05171 Coronavirus disease - COVID-19
    119814858 (Traf6)
   05162 Measles
    119814858 (Traf6)
   05168 Herpes simplex virus 1 infection
    119814858 (Traf6)
   05169 Epstein-Barr virus infection
    119814858 (Traf6)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    119814858 (Traf6)
   05135 Yersinia infection
    119814858 (Traf6)
   05133 Pertussis
    119814858 (Traf6)
   05152 Tuberculosis
    119814858 (Traf6)
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    119814858 (Traf6)
   05140 Leishmaniasis
    119814858 (Traf6)
   05142 Chagas disease
    119814858 (Traf6)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    119814858 (Traf6)
  09167 Endocrine and metabolic disease
   04936 Alcoholic liver disease
    119814858 (Traf6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aamp04131]
    119814858 (Traf6)
   04121 Ubiquitin system [BR:aamp04121]
    119814858 (Traf6)
Enzymes [BR:aamp01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     119814858 (Traf6)
Membrane trafficking [BR:aamp04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Ubiquitin E3 ligases
    119814858 (Traf6)
Ubiquitin system [BR:aamp04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    119814858 (Traf6)
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-TRAF_2 zf-RING_5 SlyX Sina_ZnF TRAF3_RING RING_XB3-XBAT31 PspA_IM30 DUF4455 zf-RING_11 U-box Spc29 DUF16 UPF0242 Rhabdo_ncap_2 EzrA DUF7310 PKcGMP_CC
Other DBs
NCBI-GeneID: 119814858
NCBI-ProteinID: XP_038186856
LinkDB
Position
5:complement(73784750..73808867)
AA seq 530 aa
MSLLNCENSCGSAQSSSDCCAAMAASCSATMKDDSVSGSASTGTFSSSFMEEIQGYDVEF
DPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPD
NFAKREILSLTVKCPNKGCLQKMELRHLEDHQAHCEFALMNCPQCQRPFQKCQFNMHVIE
DCPRRQVSCVNCAVSMPFEEKEIHDQTCPLANIICEYCGTILIREQMPNHYDLDCPTAPI
PCTFSVFGCHEKMQRNHLARHLQENTQLHMRLLAQAVHDVNLALRTCDTSSPSRGCCPED
PNYEETIKQLESRLVRQDHQIRELTAKMETQSIYVSELKRTIRTLEDKVAEMEAQQCNGI
YIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGRPGYKLCMRLHLQLPTAQRCANYISLFVH
TMQGEYDSHLPWPFQGTIRLTILDQSEAVIRQNHEEVMDAKPELLAFQRPTIPRNPKGFG
YVTFMHLEALRQGTFVKDDTLLVRCEVSTRFDMGGLRKEGFQPRSTDAGV
NT seq 1593 nt   +upstreamnt  +downstreamnt
atgagtctgttaaactgtgaaaacagctgtgggtccgcccagtcctcaagtgactgctgt
gccgccatggccgcctcctgcagtgccacaatgaaagatgacagcgtgagtggttccgcc
agcacggggaccttctccagctcctttatggaggagatccaggggtacgatgtggagttt
gacccacctttggaaagcaagtatgagtgccccatctgcttgatggcgttgcgggaagca
gtgcaaacaccatgtggccacaggttctgcaaagcctgcatcatcaaatccataagggat
gcagggcacaagtgtccagttgacaatgaaatactgctggaaaatcaactgtttcctgac
aattttgcaaagcgagagatcctttccctgacagtaaaatgcccaaataaaggctgtttg
caaaagatggaactgagacatctcgaggatcaccaagcacattgtgaatttgctcttatg
aattgtcctcaatgtcagcgtcctttccaaaagtgccagtttaatatgcatgttatcgag
gattgtcccaggagacaggtttcctgtgtaaactgtgctgtatccatgccatttgaagag
aaagagatccatgatcagacttgtcctttggcaaatatcatctgtgaatactgtggtaca
atcctcatcagagaacagatgcctaatcattacgatctggactgcccaacagcaccaatc
ccttgcaccttcagtgtttttggttgtcatgagaagatgcagagaaatcacttggcacga
cacctgcaagagaatacccagttgcacatgagactgttggcccaggctgttcatgatgta
aaccttgctttgcgtacatgtgatacttcctctccgtcccggggatgttgtccagaggac
ccaaattatgaggaaactatcaaacagttggaaagtcgcctggtaagacaggaccatcaa
atccgggaactgactgcaaaaatggaaactcagagtatatatgtaagtgagctcaaacgg
accattcgaacccttgaggacaaagttgctgaaatggaagcacagcagtgtaatgggatt
tacatttggaagattggcaactttgggatgcacttgaaatcccaagaagaggaaaaacct
gttgtcattcatagcccaggattctacacaggcagacctgggtacaagctgtgcatgcgc
ctgcaccttcagttacccactgctcagcgctgtgcaaactatatatccctgtttgtccac
acaatgcaaggagagtatgacagtcatcttccctggcccttccagggcacaatacgcctt
acaattcttgatcagtctgaagcagtaataaggcaaaaccacgaagaggtcatggatgct
aaaccagagctgcttgcctttcagcgtcccacaatcccacggaaccccaaaggttttggc
tacgtaacatttatgcatctggaagccttaagacagggaaccttcgttaaggatgatacg
ttattagtgcgctgtgaagtctctacccgctttgacatgggtggccttcggaaggagggt
ttccagccacgaagtactgatgcaggagtctag

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