Arvicola amphibius (Eurasian water vole): 119815474
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Entry
119815474 CDS
T08327
Symbol
Pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta isoform X1
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp01521
EGFR tyrosine kinase inhibitor resistance
aamp04010
MAPK signaling pathway
aamp04014
Ras signaling pathway
aamp04015
Rap1 signaling pathway
aamp04020
Calcium signaling pathway
aamp04072
Phospholipase D signaling pathway
aamp04151
PI3K-Akt signaling pathway
aamp04510
Focal adhesion
aamp04540
Gap junction
aamp04630
JAK-STAT signaling pathway
aamp04810
Regulation of actin cytoskeleton
aamp05165
Human papillomavirus infection
aamp05200
Pathways in cancer
aamp05206
MicroRNAs in cancer
aamp05214
Glioma
aamp05215
Prostate cancer
aamp05218
Melanoma
aamp05230
Central carbon metabolism in cancer
aamp05231
Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119815474 (Pdgfrb)
04014 Ras signaling pathway
119815474 (Pdgfrb)
04015 Rap1 signaling pathway
119815474 (Pdgfrb)
04630 JAK-STAT signaling pathway
119815474 (Pdgfrb)
04020 Calcium signaling pathway
119815474 (Pdgfrb)
04072 Phospholipase D signaling pathway
119815474 (Pdgfrb)
04151 PI3K-Akt signaling pathway
119815474 (Pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119815474 (Pdgfrb)
04540 Gap junction
119815474 (Pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
119815474 (Pdgfrb)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
119815474 (Pdgfrb)
05206 MicroRNAs in cancer
119815474 (Pdgfrb)
05230 Central carbon metabolism in cancer
119815474 (Pdgfrb)
05231 Choline metabolism in cancer
119815474 (Pdgfrb)
09162 Cancer: specific types
05214 Glioma
119815474 (Pdgfrb)
05218 Melanoma
119815474 (Pdgfrb)
05215 Prostate cancer
119815474 (Pdgfrb)
09172 Infectious disease: viral
05165 Human papillomavirus infection
119815474 (Pdgfrb)
09176 Drug resistance: antineoplastic
01521 EGFR tyrosine kinase inhibitor resistance
119815474 (Pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
aamp01001
]
119815474 (Pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
aamp04090
]
119815474 (Pdgfrb)
Enzymes [BR:
aamp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
119815474 (Pdgfrb)
Protein kinases [BR:
aamp01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
119815474 (Pdgfrb)
CD molecules [BR:
aamp04090
]
Proteins
119815474 (Pdgfrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
ig
Ig_3
I-set
Ig_2
V-set
VEGFR-1-like_Ig-like
C2-set_2
VEGFR1-3_N_Ig-like
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
119815474
NCBI-ProteinID:
XP_038187542
LinkDB
All DBs
Position
5:135542943..135581591
Genome browser
AA seq
1098 aa
AA seq
DB search
MGFPGVMPASVLKGQLLLSLLLLLGPPTCQSLVITPPGPEFILNVSSTFVLTCSGSAPVI
WEQMSQVSWQETAVNQDGTFSSVLTLTNVTGGDTGEYFCAYNNSLGPELGERKRIYIFVP
DPTMGFLPMDSEDLFIFVTDVTETTIPCRVTDPQLEVTLHEKKVDIPLHIPYDHQRGFIG
TFEDKTYICKTTIGDKEVDSDTFYVYSLQVSSINVSVNAAQTLVRQGESITIKCIVMGND
VVNFQWTYPRMKSGRLVEPVTDYLFGVPSRIGSILHIPAAELSDSGTYTCNVSVSVNDHG
DEKAINITVIENGYVRLLGTLGDVQIAELHRSRTLQVVFEAYPPPTVLWLKDNRTLGDSS
AGEMVLSTRNVSETRYVSELTLVRVKVAEAGYYTMRAFHEDAEAQLSFKLQVNVPVRVLE
LSESHPANGEQTIRCRGRGMPQPNVTWSTCRDLKSRCPRKLSPIPLGNGSKEENQLETNV
TFWEEERVYEVVSTLRLRHVDQPLSVRCMLQNSMGRDSQEVTVVPHSLPFKVVVISAILA
LVVLTVISLIILIMLWQKKPRYEIRWKVIESVSSDGHEYIYVDPVQLPYDSTWELPRDQL
VLGRTLGSGAFGQVVEATAHGLSHSHATMKVAVKMLKSTARSSEKQALMSELKIMSHLGP
HLNVVNLLGACTKGGPIYLITEYCRYGDLVDYLHRNKHTFLQRHSNKPRPPSAELYSNAL
PVGLSPPSHLSLTGESDGGYMDMSKDESVDYVPMLDMKGDIKYADIEPSNYMGPYDNYVP
SAPERTYRATLINESPVLSYTDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLV
KICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNSLYTTLSDVWSFGILLWEIFTLG
GTPYPELPMNDQFYNAIKRGYRMAQPAHASDEIYEIMQKCWEEKFETRPPFSQLVLLLER
LLGEGYKKKYQQVDEEFLRSDHPAILRSQARLPGFHSLRSPLDTSSVLYTAVQPNEGDND
YIIPLPDPKPDAADEGLLEGSPSLASSTLNEVNTSSTISCDSPLELQEEPQAEPEADPEQ
PQGSGCQEPLAEAEDSFL
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atggggtttcctggtgtgatgccagcttcagtcctcaaaggccagttgttgctgtctctg
ctgttgctcctgggaccaccaacctgccaaagcctagtcatcacgccccctgggccagag
ttcatcctcaacgtctccagcacctttgttctgacctgctcgggttcagcaccggtgata
tgggaacagatgtcccaggtgtcctggcaagagacagccgtgaatcaggacggcaccttc
tccagtgtgctgacactgactaatgtcaccggcggcgacaccggagaatacttttgtgcc
tacaacaactccctggggccagagctcggtgaacggaagcgcatctatatctttgtgcca
gatcccaccatgggcttcctccctatggactccgaggaccttttcatttttgtcacggat
gtcactgagacgacaattccgtgccgagtgacagacccccagctggaggtgacattgcat
gagaagaaagtggatatccccctacacataccctacgaccaccagcgaggtttcattggt
acatttgaggacaagacttacatctgcaaaaccaccattggggacaaggaagtggactct
gataccttctatgtctacagcctgcaggtgtcatccatcaatgtctctgtgaacgcagca
cagacgctggtccgccagggtgagagcatcaccatcaagtgcatcgtgatgggcaatgat
gtggtcaacttccagtggacatacccccgcatgaagagtgggcgactggtggagccagtg
acagactacctctttggggtgccctcccgaattggctccatcctgcacatcccggccgct
gagctgagtgattcgggaacctatacttgcaatgtctccgtgagcgtgaatgaccatgga
gatgaaaaggccatcaacatcactgtgatcgagaacggctacgtgaggctgctgggaaca
ctgggtgatgtacaaattgctgagctgcaccggagccggacattgcaggtggtgtttgag
gcttatccaccacccactgtcctgtggctcaaggacaaccgtaccttgggtgactccagc
gccggtgagatggttctgtccacccgcaacgtgtccgagacccggtatgtgtccgaactg
accttggtacgtgtgaaggtggcagaagctggctactacactatgcgggccttccacgag
gacgcagaggcccagctctcgttcaagctgcaggtcaatgttcctgtccgtgtgctggag
ctgagtgagagccaccctgccaacggggagcagacaatccgctgtcgtggccggggcatg
cctcagccaaatgtcacctggtctacctgcagagacctcaaaagcaggtgtccacgaaag
ctgtcacccatacccttggggaatggttccaaggaggagaaccagctagagactaacgtg
actttctgggaggaggaacgggtatatgaggtggtgagcacgctgcgcctgcgtcacgtg
gatcagccactgtcagtacgctgcatgctgcagaactcgatgggcagagattcgcaggag
gtcaccgtggtaccacattccctgcctttcaaagtggtggtgatctcagccatcctggcc
ttggtggtcctcaccgtcatctcgctcatcatcctcatcatgctgtggcagaagaaacca
cgctatgagatccgatggaaggtgattgagtctgtgagctctgacggccacgaatacatc
tacgtggaccctgtacagttgccttatgactccacctgggagctgccacgggaccagctc
gtgctcggacgcacgctaggctctggggcctttggacaagtggtggaggccacggctcat
ggtctgagccattcacacgccaccatgaaagtggctgtcaagatgctgaaatctacagcc
cgaagcagtgagaagcaagccctcatgtcagagctgaagatcatgagtcacctcggaccc
cacctgaatgtggtcaacctgctgggagcctgtaccaaaggagggcccatctacctcatc
accgaatactgccgctacggtgacctggtggactacctgcaccgcaacaaacacaccttc
ttgcagcgccattccaacaagccacgcccacccagtgctgagctctacagcaatgccctg
ccagtggggctctccccacccagccacttgtccctgactggggagagcgatggtggctac
atggacatgagcaaggatgaatctgtagactacgtgcctatgctggacatgaaaggagac
atcaaatatgcagacattgagccctccaactacatgggtccgtatgacaactatgtccca
tctgcccctgaaaggacctatcgggccaccttgatcaatgagtctccagtgcttagttac
acagacctcgtgggcttcagctaccaggtggccaatggcatggagttcttggcatctaag
aactgtgtccatcgagacctggcggccaggaatgtgctcatctgtgagggcaagctggtc
aagatctgcgactttggcctggctcgagacatcatgcgggactcaaactacatctccaaa
ggcagcaccttcctgcctctaaagtggatggccccagagagcatcttcaacagcctctac
accacgctgagtgatgtgtggtctttcgggatcctgctatgggagatcttcacactgggt
ggcaccccttatccagagctgcctatgaatgaccagttctacaatgccatcaagaggggc
taccgcatggcccagcccgctcatgcctctgatgagatctatgagatcatgcagaagtgc
tgggaagagaagtttgagactcgaccccccttctcccagctggtgctgctcctggagagg
ctgctgggcgagggttataaaaagaagtaccagcaggtggatgaggagtttctgagaagc
gaccacccagccatcctgaggtctcaagcccgcttgccagggttccacagcctccgatct
cccctggacaccagctctgtcctctataccgctgtgcagcccaacgagggtgacaatgac
tacatcatccccttgcctgaccccaagcctgatgctgctgatgagggcctcctggaaggt
tcccctagccttgccagctccaccttgaacgaagtcaacacttcctcgaccatttcctgc
gacagtcccctggagctccaagaagagccacaggcagagcccgaggcagatccagagcag
ccacagggttcgggctgccaggagcccctggctgaagcagaggacagcttcctgtag
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