Arvicola amphibius (Eurasian water vole): 119815510
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Entry
119815510 CDS
T08327
Symbol
Thbs1
Name
(RefSeq) thrombospondin-1
KO
K16857
thrombospondin 1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04015
Rap1 signaling pathway
aamp04115
p53 signaling pathway
aamp04145
Phagosome
aamp04148
Efferocytosis
aamp04151
PI3K-Akt signaling pathway
aamp04350
TGF-beta signaling pathway
aamp04510
Focal adhesion
aamp04512
ECM-receptor interaction
aamp04820
Cytoskeleton in muscle cells
aamp05144
Malaria
aamp05165
Human papillomavirus infection
aamp05205
Proteoglycans in cancer
aamp05206
MicroRNAs in cancer
aamp05219
Bladder cancer
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
119815510 (Thbs1)
04350 TGF-beta signaling pathway
119815510 (Thbs1)
04151 PI3K-Akt signaling pathway
119815510 (Thbs1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119815510 (Thbs1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
119815510 (Thbs1)
04148 Efferocytosis
119815510 (Thbs1)
09143 Cell growth and death
04115 p53 signaling pathway
119815510 (Thbs1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
119815510 (Thbs1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
119815510 (Thbs1)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
119815510 (Thbs1)
05205 Proteoglycans in cancer
119815510 (Thbs1)
09162 Cancer: specific types
05219 Bladder cancer
119815510 (Thbs1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
119815510 (Thbs1)
09174 Infectious disease: parasitic
05144 Malaria
119815510 (Thbs1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamp04131
]
119815510 (Thbs1)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
aamp00536
]
119815510 (Thbs1)
Membrane trafficking [BR:
aamp04131
]
Endocytosis
Phagocytosis
Opsonins
119815510 (Thbs1)
Glycosaminoglycan binding proteins [BR:
aamp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119815510 (Thbs1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
EGF_3
cEGF
EGF_CA
TSP1_ADAMTS
Laminin_G_3
Laminin_G_2
TSP1_CCN
EGF
Motif
Other DBs
NCBI-GeneID:
119815510
NCBI-ProteinID:
XP_038187588
LinkDB
All DBs
Position
5:complement(57580530..57595903)
Genome browser
AA seq
1171 aa
AA seq
DB search
MELVRGLGVLFLLHVCGSNRIPESGADNSVFDIFELIGAARKGSGRRLVKGPDLSSPAFR
IENANLIPPVPDDKFQDLLDAVWADKGFIFLASLRQMKKTRGTLLAVERKDNSGQIFSVV
SNGKAGTLDLSLSLPGKQQVVSVEEALLATAQWKSITLFVQEDRAQLYIDCEKMESAELD
VPIQSIFTRDLAKVARLRVAKGDANDNFQGVLQNVRFVFGTTPEDILRNKGCSSSAANIL
LTLDNDVVNGSSPAIRTDYTGHKTKDLQAICGLSCDELSSMVLEFNSLRTIVKTLQDSIR
KVTEENRELASELRRPPLCFHNGVQYRNNEEWTVDSCTECHCQNSVTICKKVSCPIMPCS
NATVPDGECCPRCWPSDSADDGWSPWSEWTSCSATCGNGIQQRGRSCDSLNNRCEGSSVQ
TRTCHIQECDKRFKQDGGWSHWSPWSSCSVTCGDGVITRIRLCNSPSPQMNGKPCEGEAR
ETKACKKDACPINGGWGPWSPWDICSVTCGGGVQRRNRLCNNPTPQFGGKDCIGDVTENQ
VCNKQDCPIDGCLSNPCFAGAKCTSYPDGSWKCGECPPGYSGNGIQCKDVDECADVPDAC
FNHNGEHRCKNTDPGYNCLPCPPRFTGTQPFGRGVEHAIANKQVCKPRNPCTDGTHDCNK
NAKCNYLGHYSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCVANATYHCKKDNCP
NLPNSGQEDYDRDGIGDACDDDDDNDKIPDDRDNCPFHYNPAQYDYDRDDVGDRCDNCPY
NHNPDQADTDNNGEGDACAVDIDGDGILNERDNCQYVYNVDQKDTDMDGVGDQCDNCPLE
HNPDQLDSDSDRIGDTCDNNQDIDEDGHQNNMDNCPYVPNANQADHDKDGKGDACDHDDD
NDGIPDDRDNCRLVPNPDQKDSDGDGRGDACKDDFDHDNVPDIDDICPENVGISETDFRR
FQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGYDEFNAVDFSGTFFINTERD
DDYAGFVFGYQSSSRFYVVMWKQVTQTYWDTNPTRAQGYSGLSVKVVNSTTGPGEHLRNA
LWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGYIRVVMYEGKKIMADSGPIY
DKTYAGGRLGLFVFSQEMVFFSDMKYECRDS
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggagctggtccggggactcggcgtcctgttcctgttgcatgtgtgtggcagcaatcgc
attccagagtctggggccgacaacagtgtgtttgacatcttcgaactcattggagcagct
cgcaagggctcgggccgccgactggtgaagggccctgacctgtctagtccagctttccgg
attgaaaacgccaacctgattccccctgtgcccgatgacaaattccaagacctactggat
gctgtgtgggccgacaaaggcttcatcttcctggcttccttgaggcagatgaagaagacc
cggggcacactcctggccgtggaacggaaagacaattccggccagatcttcagtgtggtc
tccaatggcaaagcaggcaccctggacctgagtctgagcctgccagggaagcaacaagtg
gtgtcagtggaagaagcgctcctggccactgcacagtggaagagcatcactctgtttgtg
caagaggaccgagcccagctctacattgactgtgagaagatggagagcgctgagctggat
gtccccatccagagcatctttaccagggatttggccaaggtcgccaggctccgcgttgcc
aagggagacgccaacgacaattttcagggggtgctgcagaacgtgaggtttgtctttgga
accaccccagaagacattctcaggaacaaaggctgctccagctccgctgccaacatcctt
ctgaccctcgacaacgacgtggtgaacggctccagccccgccatccgcaccgactatact
ggccacaaaacaaaggacctgcaagccatctgtggcctctcctgtgacgaactctccagc
atggtcctggaattcaacagcctgcgcaccattgtgaaaacgctacaggacagcatccgc
aaagtgacggaagagaacagagagctggccagcgaactgagacggcctcccctctgcttc
cacaatggagtccagtacaggaacaatgaggaatggactgtagatagctgtactgagtgt
cactgccagaactcagttaccatctgcaaaaaagtgtcctgccccatcatgccctgctcc
aatgccaccgttcctgatggagaatgctgtccccggtgttggcccagtgactccgctgat
gatggctggtccccctggtctgagtggacttcctgctctgcaacatgtggcaatgggatc
cagcaacgtggtcgctcctgtgacagcctcaacaacagatgcgagggctcttcagtacag
acaaggacctgccacatccaggagtgtgacaagagatttaaacaggatggtggctggagc
cactggtccccatggtcgtcctgttctgtgacctgcggggatggcgtgatcacaaggatc
cggctctgtaactctcccagcccccagatgaatgggaagccctgtgaaggtgaagcccgg
gagaccaaagcctgcaagaaagacgcctgcccaatcaatggaggctggggtccctggtca
ccatgggacatctgctctgtcacctgtggaggaggggtgcagagacgcaaccgactctgt
aacaaccccacaccccagttcggaggcaaagactgcattggtgacgtcactgaaaatcaa
gtttgcaacaagcaggactgtccaattgatggatgcctgtccaacccctgcttcgctggt
gccaagtgtaccagttatcctgatggcagctggaaatgtggtgagtgtcctcctggctac
agtggaaatggcatccagtgcaaagatgtcgatgagtgcgcagacgtgcctgatgcctgc
ttcaatcacaatggagaacaccggtgtaagaacacagaccctggttacaactgcctgccc
tgcccgccacggttcactggcacccagccctttggcagaggagtcgaacatgccattgcc
aacaagcaggtgtgcaagccacgaaacccctgcacggatgggacacacgactgcaacaag
aatgccaagtgcaactacctgggccactacagtgaccccatgtaccgctgtgagtgcaag
cctggctacgcgggcaatggcatcatctgtggggaggacacggatctcgatggctggcct
aacgagaacctggtgtgcgtggccaacgcaacttaccactgcaaaaaggacaactgcccc
aaccttcccaattcagggcaggaagactatgacagagatggaatcggtgatgcctgtgat
gacgacgatgacaatgacaaaatcccggatgacagggacaactgtccattccattacaac
ccagcccagtatgactatgacagagatgacgtgggagaccgctgtgacaactgcccctac
aaccacaaccctgaccaggcagacacagacaacaacggagagggagatgcctgcgctgtg
gacattgatggagacggcatcctcaatgaacgagacaactgccagtatgtttacaacgtg
gaccagaaggacactgatatggatggagttggagatcagtgtgacaactgccccctggag
cacaatccagaccagctggactcggactcagaccgcataggggacacctgtgacaacaat
caggacatcgacgaggatggccatcagaacaatatggacaactgtccctatgtgcctaat
gccaaccaggccgaccatgacaaagatggcaaaggagatgcctgtgaccatgatgatgac
aatgacggcattcctgatgacagggacaattgcaggctggtgcccaatcctgaccagaag
gactctgatggtgatggccgaggtgatgcctgcaaagacgactttgatcatgacaatgtg
ccagacattgatgacatctgtcctgaaaacgttggcatcagtgaaaccgatttccgccgg
ttccagatgattcctctagatcccaaagggacctctcaaaatgatcctaactgggtcgtg
cgccatcagggcaaagagcttgtccagacagtgaactgtgaccctggtcttgctgtgggc
tatgatgagtttaatgccgtggacttcagtggtaccttcttcatcaacaccgagagggat
gatgactatgctggcttcgtgttcggctaccagtccagcagccgcttctacgtcgtgatg
tggaaacaagtcacccagacctactgggacaccaaccccacaagggctcagggatattca
ggcctgtctgtaaaggttgtgaattccaccacggggcctggcgagcacctgcggaatgcc
ctgtggcacacaggaaacacccctggccaggtgcgcaccctgtggcatgaccctcgtcac
ataggctggaaggatttcactgcttacaggtggcggcttagccacaggccaaagacgggt
tacatcagggtggtgatgtatgagggaaagaaaatcatggccgactcaggacccatttac
gataaaacctacgctggcggtagactaggcctatttgtcttctctcaagaaatggtgttc
ttctcagacatgaaatacgaatgtcgagattcctaa
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