Arvicola amphibius (Eurasian water vole): 119815859
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Entry
119815859 CDS
T08327
Symbol
Prdm6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp00310
Lysine degradation
aamp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
119815859 (Prdm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aamp03000
]
119815859 (Prdm6)
03036 Chromosome and associated proteins [BR:
aamp03036
]
119815859 (Prdm6)
Enzymes [BR:
aamp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
119815859 (Prdm6)
Transcription factors [BR:
aamp03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
119815859 (Prdm6)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
119815859 (Prdm6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_jaz
Zap1_zf1
zf-C2H2_11
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
119815859
NCBI-ProteinID:
XP_038188109
LinkDB
All DBs
Position
5:128848022..128950437
Genome browser
AA seq
598 aa
AA seq
DB search
MLKPGDPGGSAFLKVDPVYLQHWQQLFPHGGGGGPLKGGGTTLPLGAPQPLQPPAPPPPP
ERAEPLPDGLRPRPASLSSVSSTPAPSSTSASSASSCAAATAAALAGLSALPVAQMPVFA
PLAAAAVAAEPLPPKDLCLGASTGPGPAKCGGGGGGGGSAGDGRGVSRFRCSAEELDYYL
YGQQRMEIIPLNQHTSDPNNRCDMCADNRNGECPMHGPLHSLRRLVGTSSAAAAAPPPEL
PEWLRDLPREVCLCTSTVPGLAYGICAAQRIQQGTWIGPFQGVLLPPEKVQTGAVRNTQH
LWEIYDQDGTLQHFIDGGEPSKSSWMRYIRCARHCGEQNLTVVQYRSNIFYRACIDIPRG
TELLVWYNDSYTSFFGIPLQCIAQDENLNVPSTVMEAMCRQDALQPFNKSSKLSSTSQQR
SVVFPQTPCSRNFTLLDKSGPIEAGFNQINVKNQRVLASPTSTSQLHSEFSDWHLWKCGQ
CFKTFTQRILLQMHVCTQNPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRA
FAGATTLNNHIRTHTGEKPFKCERCERSFTQATQLSRHQRMPNECKPITESPESIEVD
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagccgggggaccccggtggctcggccttcctcaaagtggacccagtctacctg
cagcactggcagcaactcttcccacacggaggtggcggcggcccgctcaaaggcggcggg
accacgcttccccttggcgcgccccaacccctgcagccgccagcgcctccgccgccaccc
gagcgcgccgagcctcttcccgacggcctgcggccacggcccgcctcgctctcatccgtc
tcgtccaccccggctccctcctccacctccgcctcttcagcctcctcctgcgccgccgcc
accgccgccgcgctggcgggtctctcggccctgccggtggcccagatgccggtgttcgcg
cctctagctgctgcagcggtagccgcagagccgctgcccccaaaggacctgtgtctgggc
gcatccacgggccccgggccggctaagtgcggtggcggcggcggcggcggcggcagcgcg
ggggacggccgtggcgtctcgcgtttccgctgcagcgctgaggagctggactattacctg
tacggccagcagcgcatggaaatcatcccgctcaaccagcacaccagcgaccccaacaac
cgttgcgacatgtgtgcggacaaccgcaacggggagtgccccatgcacgggccactgcac
tcgctgcgccggcttgtgggcaccagcagcgctgcggccgctgcacccccgccggagctg
cctgagtggttgcgggacctgccccgggaggtgtgcctgtgcaccagcactgtgcctggc
ctagcgtatggcatctgtgctgcgcagaggatccagcagggcacctggattgggcccttc
cagggcgtgctcctgcccccggagaaagtgcagaccggcgccgtgaggaacacgcagcac
ctctgggagatatatgatcaagatgggacactacagcactttattgatggtggggagcct
agtaagtcgagctggatgaggtatatccgatgtgcaaggcactgtggagagcagaatcta
acagtagttcagtacaggtcgaatatattctaccgagcctgtatagatatccccaggggc
accgagcttctggtgtggtacaatgacagctatacgtctttctttgggatccccttacaa
tgcattgcccaggatgaaaacttgaatgtcccttccacggtaatggaagccatgtgccga
caagatgccctacagcccttcaacaagagcagtaagctttcttccaccagccagcagcgt
tcagtggttttcccacagactccctgcagcaggaatttcaccctcttggataaatctggg
cccatcgaggcaggatttaatcaaatcaacgtgaagaatcagcgggtcctggcgagccca
acctccaccagccagctgcactcggagttcagtgactggcacctctggaagtgcggccag
tgctttaagactttcacacagcgcatcctgctgcagatgcacgtgtgcacacagaacccc
gacagaccctaccagtgtggccactgctcccagtccttttcccagccatcagaactgagg
aaccacgtggtcactcactccagtgaccggcctttcaagtgtggctactgtggtcgtgcg
tttgctggggccaccacgctcaacaaccacattcggacgcacactggagaaaagcccttc
aagtgcgagaggtgcgagaggagcttcacgcaggccacgcagctgagtcgacaccagcgg
atgcccaacgagtgcaagccaataaccgagagcccagaatcaatcgaagtggattaa
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integrated database retrieval system
