Arvicola amphibius (Eurasian water vole): 119816689
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Entry
119816689 CDS
T08327
Symbol
Smad5
Name
(RefSeq) mothers against decapentaplegic homolog 5 isoform X1
KO
K16790
mothers against decapentaplegic homolog 5
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04081
Hormone signaling
aamp04350
TGF-beta signaling pathway
aamp04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
119816689 (Smad5)
09133 Signaling molecules and interaction
04081 Hormone signaling
119816689 (Smad5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
119816689 (Smad5)
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Gene cluster
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Motif
Pfam:
MH2
MH1
IRF-3
Motif
Other DBs
NCBI-GeneID:
119816689
NCBI-ProteinID:
XP_038189479
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Position
6:152930274..152978413
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AA seq
465 aa
AA seq
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MTSMASLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSSPG
QPSKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLDICEFPFGSKQKE
VCINPYHYKRVESPVLPPVLVPRHNEFNPQHSLLVQFRNLSHNEPHMPHNATFPDSFQQP
NSTPFPLSPNSPYPPSPASSTYPSSPASSAPGSPFQLPADTPPPAYMPPEDQMGQDNSQP
MDTSSAVIPQIMPSISSRDVQPVAYEEPKHWCSIVYYELNNRVGEAFHASSTSVLVDGFT
DPSNNKSRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIFVQSRNC
NFHHGFHPTTVCKIPSSCSLKIFNNQEFAQLLAQSVNHGFEAVYELTKMCTIRMSFVKGW
GAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPLNPISSVS
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcaatggccagcttgttttctttcactagtccagccgtgaagcgattgttgggc
tggaaacaaggtgatgaggaagaaaaatgggcagaaaaggcagtcgatgctttagtgaaa
aagctgaagaagaagaagggtgccatggaggagttggagaaagccttgagtagcccagga
cagccaagcaaatgtgtcactatccccaggtccttggatggacgcctgcaagtttctcac
agaaaaggcttaccccatgttatatattgccgtgtttggcgctggccagatttgcagagt
catcatgagctaaagccattggatatttgtgaatttccttttggatctaagcaaaaggaa
gtctgtatcaatccataccactataagagagtggaaagtccggtcttacctccagtgtta
gtgcctcgccacaacgaattcaatccgcagcatagccttctggttcagtttaggaacctg
agccacaatgaaccgcacatgccacacaacgccacgtttccggattccttccagcagccc
aacagcacccctttccccttgtctcctaacagcccctaccccccttcccccgccagcagc
acataccctagctccccagcaagctctgcaccaggaagcccgtttcagctcccagctgat
acacctcctcctgcgtatatgccccccgaggatcagatgggacaagataactcccagccc
atggacacaagcagtgctgtcattcctcagatcatgcccagcatatccagcagagatgtt
cagcctgttgcctatgaagagcccaaacactggtgttcaattgtctactatgaactgaac
aaccgtgtaggggaagctttccatgcatcttctactagtgtgttagtagatggattcaca
gacccttcgaataacaaaagtcgattctgcttgggattgctgtcaaatgtgaaccgtaat
tcaaccattgaaaacacaaggcggcatattggaaaaggtgttcatctgtactacgttggt
ggggaggtgtatgccgagtgtcttagtgacagcagcatctttgttcagagtagaaattgc
aacttccaccatggcttccaccccaccactgtctgtaagattcccagcagctgcagcctc
aagatttttaacaatcaggaatttgcccagcttctggctcagtctgtcaaccatgggttt
gaggccgtgtatgagctcacaaagatgtgcaccattcgaatgagttttgtcaagggctgg
ggagcagagtaccatcgacaggatgttactagtactccatgctggattgagattcacctc
catgggcctcttcagtggctggataaagtccttactcagatgggctctcctctgaacccc
atttcttctgtttcatag
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