Arvicola amphibius (Eurasian water vole): 119816973
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Entry
119816973 CDS
T08327
Symbol
Iars1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
119816973 (Iars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
aamp01007
]
119816973 (Iars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aamp03016
]
119816973 (Iars1)
Enzymes [BR:
aamp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
119816973 (Iars1)
Amino acid related enzymes [BR:
aamp01007
]
Aminoacyl-tRNA synthetase
Class I (U)
119816973 (Iars1)
Transfer RNA biogenesis [BR:
aamp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
119816973 (Iars1)
Prokaryotic type
Other AARSs
119816973 (Iars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Plectin_PPL
Motif
Other DBs
NCBI-GeneID:
119816973
NCBI-ProteinID:
XP_038190012
LinkDB
All DBs
Position
6:complement(144725970..144773682)
Genome browser
AA seq
1262 aa
AA seq
DB search
MVQQVPENISFPAEEEKTLQFWSKHNCFQECLKQSKNKPKFTFYDGPPFATGLPHYGHIL
AGTIKDIVTRYAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIAEYNRQC
RAIVMRYSTEWKSTVTRLGRWIDFDNDYKTLYPQFMESVWWVFKQLYDKGLVYRGVKVMP
FSTACGTPLSNFESNQNYKDVQDPSVFVTFPLEEDENTSLVAWTTTPWTLPSNLALCVNP
EIQYVKIKDVARGKLFILMEARLSALYKLESDYEILERFPGASLKGKKYKPLFDYFIRYK
ESGAFTVLVDHYVKDEEGTGVVHQAPYFGADDHRVCMDFNIIQKDSTPVCPVDASGCFTE
EVTHFVGQYVKDADKNIIRMLKEQDRLLAACTFTHSYPFCWRSDTPLIYKSVPSWFVRVE
HMVDQLLKNNDLCYWVPEFVREKRFGNWLKDARDWAISRNRYWGTPIPLWVSDDFEEVVC
IGSVAELEELSGTKVSDLHRESIDHLTIPSRCGKGPLRRVSEVFDCWFESGSMPYAQVHY
PFESKREFEDAFPADFIAEGIDQTRGWFYTLLVLATALFGQPPFKNVIVNGLILASDGQK
MSKRKKNYPDPVSIINKYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVLLPWYNAY
RFLVQNVFRLHKEDGVEFLYNEHTVRESPNITDRWILSFMQSLIGFFETEMAAYRLYTVV
PRLVKFVDILTNWYVRMNRRRLKGESGTEDCVVALETLFSVLLSLCRLMAPYTPFLTELM
YQNLKTLIDPVSVRDKDTLSIHYLMLPCVREELIDKKTENAVSRMQSVIELGRVIRDRKT
IPIKYPLKEIVVIHQDPEALEDIKSLEKYIIEELNVRKVTLSTDKNKYGIRLRAEPDHMV
LGKRLKGAFKAVMVAIKQLSNEELEQFQKSGSIVVEGHELHEEDLRLMYTFDQATGGTAQ
FEAHSDAQALVLLDVTPDQSMVDEGMAREVINRIQKLRKKCNLVPTDEITVYYNAKSEGR
YLNNVIESHTDFIFATIKAPLKPYPVPSSDNVLIQEQTQLKGSELELTLTRGSCVPGPAC
AYVNLNICANGTEQGGVLLLENPKGDNKLNLVKLKSVVTSIFGVKNAELSVFHGETEIEN
QTDLLSLSGRTLCVTAGAAPAATNSPSALLCQYINLQLLNAEPQECLTGTVGTLLLENPL
GQNGLSHQGLVYEAAKVFGLRSRRLKLFLNETQTQEITEDISMKTLNMKTVYVSVLPTTA
DG
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atggtccaacaagttccagaaaatatcagttttcctgctgaagaagagaaaaccttgcag
ttctggtccaagcataactgcttccaggaatgcttaaagcagtcaaagaacaagccaaaa
tttaccttctatgatgggcctccctttgcaactgggctgcctcactatggacatatactt
gcggggacaattaaagacatagttacaagatatgcccaccagagtgggtttcacgttgac
agaagatttggatgggattgtcatggcttacctgtggaatatgaaattgataagacactg
gggatcaaagggccagaggatgtggccaaaatggggattgcggagtataacagacagtgc
cgagcaattgtgatgagatactctactgagtggaagtctaccgttaccagactcggccgg
tggatcgactttgacaatgactacaaaactctatacccgcagttcatggaatcagtctgg
tgggtcttcaagcaactgtatgacaaaggccttgtgtacagaggcgtgaaagtcatgcct
ttctccactgcttgtggcactccactttctaacttcgaatcaaaccagaattacaaggat
gttcaggatccttcagtatttgtaacgttccctctggaggaagatgaaaacacatcctta
gttgcttggacgaccactccttggactttgcctagtaatcttgccctgtgtgtcaatcca
gaaatacagtatgtgaagatcaaagatgttgccaggggaaaattgttcattttaatggaa
gccagattatcggccctctataaactagaaagtgactacgagatccttgaaaggtttcct
ggagcctctctcaaaggcaagaaatataagccattgtttgactactttattaggtataaa
gagagcggggccttcaccgtgcttgttgaccactatgtgaaggatgaagaaggcacagga
gttgtgcaccaggccccttactttggtgctgatgaccatcgggtctgtatggacttcaac
atcattcagaaagactcaacccccgtctgccctgtggatgcttccggctgcttcacagaa
gaagtgacacattttgtgggacagtacgtgaaggatgctgacaaaaatatcattaggatg
ttgaaggaacaggaccggctgcttgcggcctgcaccttcactcacagctatcctttctgc
tggaggtcagacactcccctcatttacaagtcggtgcccagctggtttgtgcgagtggag
cacatggtggaccagctactgaagaacaatgatctgtgttactgggtcccagagttcgta
cgagaaaagcggtttggaaattggctgaaggatgcacgtgactgggcaatctccagaaac
cgatactggggcacacccatcccactgtgggtcagtgacgacttcgaggaggttgtttgc
atcggatcagtggcagagcttgaagaattgtcgggaaccaaagtctcagatctccacaga
gagagcattgaccacctgaccatcccatcccgctgtgggaaaggacccttgcggcgcgtc
tctgaggtgtttgactgttggtttgagagtggaagtatgccctatgcccaggttcattat
ccatttgagagcaagagagagtttgaggatgcttttcctgcagacttcattgccgaaggc
atcgatcaaaccagaggatggttctacaccctgctagtgctggccacagccctctttgga
caaccacccttcaagaacgtgattgtgaacggactcatcttggcaagtgatggccaaaaa
atgagcaaacggaagaagaactacccagatccagtttccatcatcaataagtatggagct
gatgccctcaggttatatctgatcaattcccctgtagtaagagcagagaacctccgcttt
aaggaggaaggtgtacgggatgtcctcaaggatgtgctgctcccgtggtacaacgcatac
cgcttcctcgtccagaatgtctttaggcttcacaaggaggatggagtggaattcttgtac
aatgagcacacagtcagagaaagccctaacatcactgaccggtggattctgtccttcatg
cagtctctcattgggttctttgagaccgaaatggcagcttacagactatacactgtggtg
ccgcgcctggttaagtttgtagatattctgaccaattggtatgtccgaatgaacaggaga
agattaaagggtgaaagtgggacggaagactgtgtggtggctctggagaccttgttcagc
gtcctgctttctttgtgcagactgatggccccttacacaccgtttcttactgaattgatg
taccagaatctgaagacgctgattgaccctgtttctgttcgggacaaggacacactcagc
atccactacctcatgctgccatgtgttcgagaagaactgattgacaagaaaacggagaat
gcagtgtctagaatgcagtccgtgattgaactcggacgagtgatacgagaccggaaaact
attccaataaagtatcctttgaaggaaattgtggttatccaccaagacccagaagctctt
gaggatatcaagtccttggagaagtatatcattgaggaattaaatgttcgaaaagttacg
ctctctactgataaaaacaagtatggtattcgactaagggcagaaccagatcacatggtc
cttgggaagcgtctgaagggagcctttaaagcagtgatggtggccatcaagcagctgagc
aatgaggagctggagcagttccagaaaagcgggagtattgttgtggaaggccatgaattg
cacgaggaagatcttcgcctcatgtacacctttgaccaggccacaggaggtactgcacag
tttgaagcacactctgacgcgcaggctttagttctcttagatgtcacacctgaccagtca
atggtggatgaaggcatggctcgggaggtcatcaatcgtatccagaaacttcgcaagaag
tgcaatctggttccaactgatgaaataacagtctattataatgcaaaatctgaaggaaga
tacttgaataacgtcattgaaagccacacagacttcatatttgccactatcaaagctccc
ttaaaaccatatccagttccttcatcggataatgtccttattcaggaacaaacacagttg
aaagggtcggaactggaactcacgctcaccagaggatcctgtgtgcctggtcctgcttgt
gcttacgtaaaccttaacatctgtgcgaatggcactgagcaaggtggagtactgcttttg
gagaatccaaaaggtgataataaattgaaccttgtaaagctgaaaagtgttgttactagc
atatttggtgtcaagaatgcggagctgtcagtcttccacggagaaacagaaatagagaac
cagactgacctgctgagtctgagtggaaggacactgtgtgtgactgcaggagcagccccc
gctgccaccaacagccccagtgcgcttctgtgtcagtatatcaacctgcagctcctgaat
gcagagccacaagagtgtttaacaggaactgtgggcactctgctgcttgaaaacccactt
ggacagaatggactcagccaccaagggcttgtgtatgaggcagccaaagtgtttggactg
cggagcaggagactgaagctgtttctgaatgagactcaaacacaggaaattacagaagat
atctcaatgaagactctgaacatgaagactgtgtatgtgtctgtcctgccaacaactgcg
gatggctaa
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integrated database retrieval system
