Arvicola amphibius (Eurasian water vole): 119820558
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Entry
119820558 CDS
T08327
Symbol
Hps6
Name
(RefSeq) Hermansky-Pudlak syndrome 6 protein
KO
K20192
Hermansky-Pudlak syndrome 6 protein
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamp04131
]
119820558 (Hps6)
Membrane trafficking [BR:
aamp04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
119820558 (Hps6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS6_C
HPS6
PTHB1_CtH
Motif
Other DBs
NCBI-GeneID:
119820558
NCBI-ProteinID:
XP_038194953
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Position
1:185764180..185766795
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AA seq
806 aa
AA seq
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MKRAGTLRLLSDLSNFTGAARLRELLAGDPDVLVRCSPDGRHLLLLRSPGSPAPQLLVSV
RGPGLTLERAWPEGHPSPLDAFFVPWLARPALILVWESGLAEVWGTGMEPGWKLLQRTEL
CPDGGARLLAVAATRGRLVWCEERQLGVEDQPGQLSMAFSHRVCVKTLETSGEAGTKLGR
THILLHHCPPFGLIASRKDLFLVPTTITWPGVAHVLLIWNPSKGKVIVVAPSLGLSHSKS
LNPRQGDTWDFRTLLRGLPGFLTPREPLAVHTWASSSHGLLLLDLKGKVSLVQSHGGTRT
VGTLQEAPVGLKGPAALGTFHGTLACVLGSTLELLDMSSGQLLERKVLSTDKVHLLEPSA
PGMKNEEDMEMQGALCLLSALGLFCVGWEAPQGLELPSDKDMVFEEACGYYQRRSLRGTQ
LTPEELRHNSMFRAPQALASILQGHLPPSALLTMLRAELRDYRSLEQLKAQLVAGDEEEA
GWTELAEHEVARLLRTQLTGDHLAQFNTIFQALPTAAWSATLQALQLQPDRTGRLRSQAP
PDVWKKILRGPTAGKEHPNGILPPFELLCQCLCQLEPQWLPPFVELAQQQGGPGWAAEGP
SLPLYRRALAVLGEEGKRPEALELDLLLGSGRPKAVLQAVRQLIEKEQWERALQAGLALD
SSSPLLRSEIFKLLLAEFARHRRLDAHLPLLCRLCPPEVAPDELLLLLRTHLPDDVGTAN
PFPEPGAEPPLTVGLVRALLEQTGAQGRPSGPAQSKYEDILWDTGTPPPTPPRGPIATLQ
ASDHPGPEAWVPSGQGLCATDMGGHL
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtgcaggaactctgcgcctgctttcggatttgagcaactttaccggcgcggcc
cggctccgcgagttgttggctggggacccagatgtcctagtccgctgcagccctgacggc
cgccacctgctgctgttaagatcccccgggtcgcctgccccgcaacttctagtgtcagtg
aggggaccgggcctgacgctagagcgcgcctggccggagggccacccctcgccgctggac
gccttcttcgtcccgtggctggcgcgacctgcgctgatcttggtgtgggagagtggccta
gcggaggtgtggggcacggggatggagcccggctggaagctacttcagaggacagagttg
tgtcccgatggtggagcccgcttgttggccgtggcagcaactcgaggccgcctagtttgg
tgtgaggagcgtcagcttggcgttgaggaccagccagggcagctttcaatggctttcagc
caccgtgtgtgcgtcaagaccctggagaccagcggggaggctggcaccaaactaggccgc
acacacatcctgctgcaccactgccccccttttggactaatagcctcccgcaaggacctc
ttcctggtgcccactaccatcacttggcctggcgtggcccatgttctgctcatctggaac
ccaagcaagggcaaggtgatagttgtcgccccatctcttggcctttctcacagtaaaagc
ctgaatcccagacaaggagacacctgggactttcggaccctgctgcgaggccttcctggg
ttcctgacccccagggagccattggctgtccacacctgggcctcatcttcccatggcttg
ttgttgctggacttgaaaggcaaggtgagcctagtgcaatcccatggtggtactcggact
gtgggaaccctgcaggaggcgcctgtcggcctaaagggtcctgcagctctgggaacattt
catggcaccttagcctgtgtcctgggctccacgttggaactcctggacatgagcagcggg
cagctgttggaaaggaaggtcctaagtacagataaggtacatctactggagccgtcagcc
cctggcatgaagaatgaggaagacatggagatgcaaggagctctctgcttgctttcagcc
ttgggtctcttttgtgtgggttgggaagctccccaaggtcttgagctaccctcagacaag
gatatggtgtttgaggaggcctgtgggtactaccagcgacggagcctgcgcggtacccag
cttaccccagaagagctgagacacaacagcatgtttcgggcacctcaggccttggcctcc
atcctccagggccacctgcccccatctgcactgttgaccatgctgagggctgagcttcgg
gactaccggagtttggagcagctcaaggcccagctggtggccggggatgaggaggaagct
ggctggaccgagctggcagagcatgaagtggcacgcctgctgagaacgcagttgaccggc
gaccacctggcccaattcaacaccattttccaagcccttcctacagcagcttggagtgcc
accctccaggccctgcagctccagccagataggacgggcaggctgaggtcccaggcaccc
cctgatgtatggaagaagatactgaggggtccaacagctggaaaggagcaccccaatgga
atcttgcccccctttgaactcctgtgtcagtgcctatgccagctagagcctcagtggctc
cccccgtttgtggaactggctcagcagcagggtgggccaggctgggcagccgaaggcccc
agtctacccctttatcggcgagccctagctgtgctgggtgaggaagggaagagacctgag
gccctggaactagatctgcttctgggcagtgggcggcccaaggctgtgctgcaagccgtg
aggcagctaatagagaaggagcagtgggaaagggctctgcaggccggcctggccctggac
tcctccagccctctgcttcggagcgagatctttaagctcttgctggcagaatttgcccgg
caccgccgccttgatgctcacctccccctcctttgccgcctgtgcccaccagaagtggct
ccagatgagcttctgcttttactgaggacacacctcccagatgatgtgggaactgccaac
cctttccctgagcctggggcagagccccctctcacagtgggcttggtcagagccctccta
gaacaaactggggctcaagggcgaccctctggcccagctcaaagcaaatatgaggacatc
ctatgggatacaggcactccgccccctaccccaccccgcggacctattgctactctccag
gcatcagaccacccagggccagaagcatgggtaccatctggacaggggctctgtgcaact
gacatgggaggtcatttgtag
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