Arvicola amphibius (Eurasian water vole): 119820708
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Entry
119820708 CDS
T08327
Name
(RefSeq) LOW QUALITY PROTEIN: solute carrier family 22 member 3-like
KO
K08200
MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 3
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp05231
Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09160 Human Diseases
09161 Cancer: overview
05231 Choline metabolism in cancer
119820708
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aamp02000
]
119820708
Transporters [BR:
aamp02000
]
Solute carrier family (SLC)
SLC22: Organic cation/anion/zwitterion transporter
119820708
Major facilitator superfamily (MFS)
Organic acid transporters
Organic cation transporter (OCT) family [TC:
2.A.1.19
]
119820708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sugar_tr
MFS_1
Motif
Other DBs
NCBI-GeneID:
119820708
NCBI-ProteinID:
XP_041911493
LinkDB
All DBs
Position
8:complement(8111323..8163090)
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AA seq
721 aa
AA seq
DB search
MGAQGPAVSAGAQGHAVSAGCRAMLSPAGVCMAMLCLQVCRGHAASAVYRAMLRLQVHRA
MLCLQVCRGHAASAGIQGHAASTGVQGQCGVCRCAGAMLRLQVLQGHAVSAGMQGPCCVA
GVQGHAVSAGAAGAMLCLQGCRAMLCLQVLQDQCCVCRYSRGHAVSAAGLQYTLEPWRSR
LTPVKEWTCQQRAGASRAKSRASSMAFNRGVPPEGVGQILLTRPQISGFRGRERFRCYID
LLASDIEEGCRQETEATKESSHAGATMGKLGLLASVNKREETARPQRAGFFVNCPGTGEH
DLILGKRGAFDLVCAMPGVGTSPTILNLGFLAGAFTLGYAADSYGRILIYLISCFGVGVT
GVVVAFATKFSVFVIFRFLQGVFGKGAWMTCFVIVTEIVGSKQRRIVGIVIQMFFTLGII
LLPGIAYFTPSWQGIQLAISLPSFLFLLYYWVVPESPRWLITRKQGEKALKILRHVAKCN
GKYLSPNYSEIMVTDEEVSNPSFLDLVRTPQMRKCTLILMFAWFTSAVVYQGLVMRLGIV
GGNLYIDFFISGLVELPAALLILLTIERLGRRLPFAASNIVAGVACLVTAFLPEGIPWLR
TTVATLGRLGITMAFEIVYLVNSELYPTTLRNFGVSLCSGLCDFGGIIAPFLLFRLAAVW
LELPLIIFGILASICGGLVMLLPETKGIALPETVDDVEKLGSSQLHQCGRRKKTQVSNSN
V
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcgcagggccctgctgtgtctgcaggtgcacagggccatgctgtctctgcaggt
tgcagggccatgctgtctcctgcaggggtgtgcatggccatgctgtgtctgcaggtgtgc
aggggccatgctgcgtctgcagtatacagggccatgctgcgtctgcaggtgcacagggcc
atgctgtgtctgcaggtgtgcaggggccatgctgcgtctgcaggtatacagggccatgct
gcgtctacaggtgtgcagggccaatgcggcgtctgcaggtgtgcaggggccatgctgcgt
ctgcaggtgctgcagggccatgctgtgtctgcaggtatgcaggggccatgctgtgtcgca
ggtgtgcagggccatgctgtgtctgcaggtgctgcaggggccatgctgtgtctgcagggc
tgcagggccatgctgtgtctgcaggtgctgcaggaccagtgctgtgtctgcaggtatagc
aggggccatgctgtgtctgcagctggtctgcagtacacactggaaccctggagaagcagg
ctaactccagtgaaggaatggacttgccagcagagagcaggggcaagcagggcaaagagc
agagcttcctccatggcctttaatagaggcgtgccaccagaaggtgttggccagattctt
ctcacccgacctcaaatatctggatttaggggaagggagaggttccggtgctacatagac
ctgttggcctctgacattgaggaaggctgtagacaagagactgaagctacaaaggaaagt
tctcatgctggggctaccatggggaaactgggcctcctggcctctgtgaacaagagagaa
gaaactgcaaggccacagcgcgcaggcttctttgtcaactgtccagggactggggaacat
gacctgattctgggcaagagaggggcatttgaccttgtctgtgccatgcctggagttggg
acctcacccaccatcctgaaccttggcttcctggctggggcattcaccttgggctatgca
gcagacagttatggcaggatactcatttacttaatatcctgtttcggtgttggcgtcaca
ggggtcgtggtggcatttgcaaccaaattttccgtgtttgtcatcttccgcttcctgcaa
ggcgtgtttggaaagggggcgtggatgacctgcttcgtgattgtgactgagatagtaggt
tcaaaacaaaggaggattgtgggaatcgtgatccagatgttcttcacgcttggaataatc
ctcctccctggaattgcctactttacccccagctggcagggcattcagcttgccatctcg
ctccccagcttcctcttcctcctctattactgggtagttcctgaatctccccgctggctg
atcacccggaagcaaggggaaaaagctttgaagatcctgagacatgtggctaagtgcaat
gggaaatacctctcaccaaattactcggagatcatggttacagacgaagaagttagcaac
ccatcctttctagaccttgtgaggactccccagatgaggaagtgcacactcattctgatg
tttgcttggttcacaagtgccgtggtgtatcaaggactcgtcatgcgcctgggaatcgtc
ggaggcaacctctacatcgacttcttcatctcgggacttgtggagctgcctgcagccctc
ttgatccttctgaccatagagcgtcttggacgacgccttcccttcgcagcaagcaatata
gtggctggggtggcgtgcctggtcactgcgttcttaccagaagggataccatggctaagg
accacagttgctaccctaggaagactcgggataaccatggcctttgaaattgtttatttg
gtaaattcagagttgtaccctacaacattaaggaactttggggtttcgctctgctcaggc
ttgtgtgactttggggggatcatagctccatttctactcttccgactagcagctgtgtgg
ctagaactacctctgatcatcttcggcatcctggcatctatctgtggaggcctcgtgatg
cttttgcctgaaaccaagggcatcgccttgcccgagacagtggacgacgtggaaaagctt
ggcagctcacagttgcatcagtgtggcaggagaaagaaaacccaggtctccaattctaac
gtctga
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