KEGG   Arvicola amphibius (Eurasian water vole): 119820941
Entry
119820941         CDS       T08327                                 
Symbol
Smndc1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30 isoform X1
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
aamp  Arvicola amphibius (Eurasian water vole)
Pathway
aamp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aamp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119820941 (Smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aamp03041]
    119820941 (Smndc1)
Spliceosome [BR:aamp03041]
 Complex A
  U2 snRNP components
   U2 related factors
    119820941 (Smndc1)
 Complex B
    119820941 (Smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    119820941 (Smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR TraX-like
Other DBs
NCBI-GeneID: 119820941
NCBI-ProteinID: XP_038195610
LinkDB
Position
1
AA seq 239 aa
MMSEDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSETLA
SSDSFASTQPTHSWKVGDKCMAIWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPL
LNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQ
QFNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKYNVRHLMPQ
NT seq 720 nt   +upstreamnt  +downstreamnt
atgatgtccgaggatctagcaaaacagttggctagctacaaagcccaactccagcaagta
gaagctgctctgtctggaaacggagaaaatgaagatctgttgaaattgaagaaggacttg
caagaagttatagaattgaccaaagaccttctgtcaactcagccttcggaaactcttgca
agttcagacagttttgcttctactcagcctactcattcatggaaagtaggggacaaatgt
atggcgatctggagtgaagatggacagtgttacgaagcggagatcgaggagatagatgaa
gaaaatggcaccgctgcaatcacctttgctggttatggcaatgccgaagtgactccgttg
ttgaacctcaaacccgtagaagaaggaaggaaggcaaaagaggacagtggcaacaaaccc
atgtcaaaaaaagaaatgattgcccagcaacgtgaatataaaaagaaaaaagctttgaaa
aaagcacagagaataaaagaacttgagcaggaaagagaggaccagaaggtgaaatggcag
cagttcaacaacagggcttattctaaaaacaaaaaaggccaggtaaagaggagtattttt
gcttcgccagaaagtgtaacgggcaaagttggagtaggaacttgcggaattgctgacaag
cccatgacacagtatcaagatacatcaaaatataacgtcaggcatttgatgcctcaataa

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