Arvicola amphibius (Eurasian water vole): 119822896
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Entry
119822896 CDS
T08327
Name
(RefSeq) sharpin
KO
K20894
shank-associated RH domain-interacting protein
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04217
Necroptosis
aamp04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
119822896
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
119822896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aamp04121
]
119822896
Ubiquitin system [BR:
aamp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LUBAC complex
119822896
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GFIT
Motif
Pfam:
Sharpin_PH
Zn_ribbon_RanBP
ubiquitin
Motif
Other DBs
NCBI-GeneID:
119822896
NCBI-ProteinID:
XP_038198465
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Position
9:complement(34991588..34998600)
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AA seq
379 aa
AA seq
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MAPPAGGAAAATNPSSPAVLLAVQAAVRPLGAGHDTEAQLRRLQLSADPERPGRFRLGLL
GTGPGAVSLEWPLESICYTVRGPNQHELQPPPGGPGTFSVHFLNSQEAQQWAALVRDATA
EGQNGNGSQAQAPEMCPLSPPCSSVAQIPKATQPEVDLPQSSGNLKKEELATRLAQAIAD
GDEKEAAHVAAILAQHHVALNVQLMEAWFPPGPIRLQVTVEDATSVLSSASSAHVSLQIH
PYCSIAALQEKVFSEFGFPPAVQRWVIGRCLCVPERSLASYGVSQDGDPAFLYLLSAPRE
ASGHSPQHSKMDGKLGCLFPQSLEQPHTLQPTSSSLPNPPQPGWSCPSCTFINASNRPGC
EMCSTQRPCTWDPLTTAST
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgcccgccggcggggctgcagcggctacaaaccctagttcgcctgcggtgctc
ctggcagtgcaggccgcagtgagaccgctgggcgccgggcacgacaccgaggcgcagcta
cggaggctgcagttaagcgccgaccctgagcgtcctgggcgcttccggctggggctgttg
ggcaccgggccaggggcggtcagtttagaatggcccttggagtccatttgctataccgtg
cgtggacctaaccaacacgagctgcagcctccgccgggagggcctggaaccttcagtgtg
cacttcctcaactcccaggaagcacagcagtgggcagcactggtgcgagatgccaccgcg
gagggacaaaatggcaatggcagccaagcccaagccccagaaatgtgtcccctttctcca
ccatgttcttctgtggctcaaatacctaaagcaacccaacctgaggtggatcttcctcaa
agttctggaaacttgaaaaaagaagagctggctacacgcctggcccaggccattgcagat
ggagatgagaaagaagcagcccatgtggcagcaatcctggcacagcatcatgtggctctc
aatgtccagctcatggaggcctggttcccaccaggtcccatcaggttgcaagtcacagtt
gaagatgccacatctgttttgtcctctgcatcatctgcccatgtctcactgcagatccac
ccatactgctccattgcagcccttcaggaaaaggtgttctcagagttcggtttcccgcca
gctgtgcagcgctgggtcattgggcggtgcctatgtgtgcctgaacgaagccttgcttcc
tatggggtctcgcaagatggggaccctgcttttctttacttgctctcagccccccgagaa
gcttcaggacatagccctcaacattccaagatggatgggaaattaggatgcttgtttcct
cagtcattggagcagcctcataccctccagccaaccagttccagtctcccaaatccccct
cagcctggctggtcttgcccttcctgcaccttcatcaatgcctcaaaccgccctggctgt
gagatgtgtagcacccaaaggccctgtacttgggatccccttactacagcttccacctag
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