KEGG   Arvicola amphibius (Eurasian water vole): 119823381
Entry
119823381         CDS       T08327                                 
Name
(RefSeq) LOW QUALITY PROTEIN: HLA class II histocompatibility antigen, DO alpha chain
  KO
K06752  MHC class II antigen
Organism
aamp  Arvicola amphibius (Eurasian water vole)
Pathway
aamp04145  Phagosome
aamp04514  Cell adhesion molecules
aamp04612  Antigen processing and presentation
aamp04640  Hematopoietic cell lineage
aamp04658  Th1 and Th2 cell differentiation
aamp04659  Th17 cell differentiation
aamp04672  Intestinal immune network for IgA production
aamp04940  Type I diabetes mellitus
aamp05140  Leishmaniasis
aamp05145  Toxoplasmosis
aamp05150  Staphylococcus aureus infection
aamp05152  Tuberculosis
aamp05164  Influenza A
aamp05166  Human T-cell leukemia virus 1 infection
aamp05168  Herpes simplex virus 1 infection
aamp05169  Epstein-Barr virus infection
aamp05310  Asthma
aamp05320  Autoimmune thyroid disease
aamp05321  Inflammatory bowel disease
aamp05322  Systemic lupus erythematosus
aamp05323  Rheumatoid arthritis
aamp05330  Allograft rejection
aamp05332  Graft-versus-host disease
aamp05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:aamp00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    119823381
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    119823381
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    119823381
   04612 Antigen processing and presentation
    119823381
   04658 Th1 and Th2 cell differentiation
    119823381
   04659 Th17 cell differentiation
    119823381
   04672 Intestinal immune network for IgA production
    119823381
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    119823381
   05164 Influenza A
    119823381
   05168 Herpes simplex virus 1 infection
    119823381
   05169 Epstein-Barr virus infection
    119823381
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    119823381
   05152 Tuberculosis
    119823381
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    119823381
   05140 Leishmaniasis
    119823381
  09163 Immune disease
   05310 Asthma
    119823381
   05322 Systemic lupus erythematosus
    119823381
   05323 Rheumatoid arthritis
    119823381
   05320 Autoimmune thyroid disease
    119823381
   05321 Inflammatory bowel disease
    119823381
   05330 Allograft rejection
    119823381
   05332 Graft-versus-host disease
    119823381
  09166 Cardiovascular disease
   05416 Viral myocarditis
    119823381
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    119823381
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:aamp04147]
    119823381
Exosome [BR:aamp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   119823381
  Exosomal proteins of epithelial cells
   119823381
  Exosomal proteins of breast milk
   119823381
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_3 Ig_2
Other DBs
NCBI-GeneID: 119823381
NCBI-ProteinID: XP_038199286
LinkDB
Position
9:123220463..123223444
AA seq 250 aa
MFLRVELVLAFHTLISFLSPQEVWAIKADHMGSYGPAFYQSYDASGQFTHELXWEQIFSV
DLKNREVVWRLPEFGXLPYSNFQNGLASIAMIRAHLDILVERSQPNQSHQXPPRVTVLPK
SPVELGKPNVLICVVNDIFPPVINVTWLRNSQPVTEGVTRPSFYAQPNHRFRKFHYLTFV
PSAEDVYDCRVEHWGLDQPLLQHWEPQVLTPPPETTETLVCYLGLAVGFVGFLLGTVLIV
TGMCLPSARR
NT seq 753 nt   +upstreamnt  +downstreamnt
atgttcctccgtgtggagctggtcctggcattccacaccctgataagcttcctgagtccc
caggaagtatgggccatcaaggctgaccacatgggctcctatggacctgccttctaccag
tcttatgatgcttctggacagttcacacatgaattgnnatgggaacaaattttttctgtg
gacctgaagaacagggaggtcgtgtggcgtctgcctgagtttgggngcctcccttactcg
aacttccaaaatgggttggccagcatcgccatgatcagagctcatctggacatcttggtg
gaacgctcccaaccgaaccagagccatcagtagcctcccagggtgaccgtactccccaag
tctcccgtggagctgggaaagcccaacgtcctcatctgcgtcgtgaatgatatcttccca
cctgtgatcaatgtcacctggctgcgcaacagccagcccgtcactgagggagtgaccaga
cccagcttctacgcccagcctaaccacaggttccggaagttccactacctgaccttcgtg
ccctcggcagaggatgtgtacgactgcagggtggagcattggggcctggaccagccactc
ctccagcactgggagccccaggtgcttaccccaccaccagaaaccaccgagaccctggtc
tgttacctgggcctggccgtcggctttgtgggcttccttctgggcacggttctcatcgtc
acaggcatgtgcctgcccagtgcccgcaggtaa

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