Arvicola amphibius (Eurasian water vole): 119828014
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Entry
119828014 CDS
T08327
Symbol
Pkp1
Name
(RefSeq) plakophilin-1 isoform X1
KO
K10387
plakophilin 1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
aamp04812
]
119828014 (Pkp1)
Cytoskeleton proteins [BR:
aamp04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
119828014 (Pkp1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_EZ
HEAT
V-ATPase_H_C
ARM_LRRK2
UTP20_C
LTN1_E3_ligase_6th
ARMC9_ARM
Motif
Other DBs
NCBI-GeneID:
119828014
NCBI-ProteinID:
XP_038205953
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Position
12:84160659..84202543
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AA seq
749 aa
AA seq
DB search
MNHSPLKTALAYECFQDQDNSTLALPSDQKMKTGTSGRQRVQEQVMMTVKRQKSKSSQSS
TLSHSNRGSMYDGLADNYNNYGTTSRSSYFSKFQAGNGSWGYPIYNGTLKRESDNRRFSS
YSQMENWSRNYPRGSCATTGAGSDICFMQKIKASRSEPDLYCDPRGTLRKGTLGSKGHKT
IQNRYSFYSTCSGQKAVKKCPVRPPSCTSKQDPVYVPPISCNKDLSFGHSRASSKICSED
IECSGLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVLQLEGICKLVDLLRSP
NQNVQQAAAGALRNLVFRSTKNKLETRRQNGIREAVNLLRRSGSTEIQKQLTGLLWNLSS
TDELKEELVADALPVLTDRVIIPFSGWCDGNSNMSRDVVDPEVFFNATGCLRYEKTEPRS
FLALCPSSLVLSRRNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCI
LHNLSYRLDAEVPTRYRQLEYNARNTYTEKSSTGCFSNRGDKMMNNNYDCPLPEEESNPK
GSSWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLP
QIARLLQSGNSDVVRSGASLLSNMSRHPVLHRMMGNQVFPEVTRLLTSHTGNTSNSEDIL
SSACYTVRNLMTSQPQMAKQYFSSSMINNVFNLCRNSASPKAAEAARLLLSDMWASKELQ
GVLRQQGFDRNMLGTIAGANSLRNFTSRF
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgaaccactcgccactcaagaccgcgttggcgtacgaatgcttccaggaccaggacaac
tccacgctggctttgccctccgatcaaaagatgaagaccggcacgtcgggcaggcagcgt
gtgcaggagcaggtgatgatgactgtcaaacgacagaagtccaagtcttcgcagtcgtcc
accctgagccactccaaccgaggttccatgtatgacgggctggccgacaactacaacaac
tatgggaccacaagcagaagcagctacttctccaagttccaggcagggaacggctcgtgg
ggatatccgatctacaatgggaccctcaagcgggaatccgacaacaggcgcttcagctcc
tacagccagatggagaactggagccggaactatccccgcggcagctgtgccactacaggc
gccggcagcgacatctgcttcatgcaaaaaatcaaggcgagccgcagtgagcccgacctc
tactgtgacccgcggggcacgctgcgcaagggcacgctgggtagcaagggccacaagacc
atccagaaccgttacagcttctacagcacctgcagcggtcagaaggccgtcaagaagtgt
cccgtgcgaccgccctcctgcacctccaagcaggacccggtgtacgtgccgcctatctcc
tgcaacaaggacctgtcctttggccactcaagggccagttccaaaatctgcagtgaagac
attgagtgcagtgggctgaccatccccaaggctgtgcagtacctgagctcccaggatgag
aagtaccaggccattggggcctattacatccagcatacctgcttccaggatgaatctgcc
aagcaacaggtccttcagctggagggcatctgcaagttggtggacctcctccgcagcccc
aatcagaacgtccagcaggctgctgctggggccctgcgcaacctggtgttcaggagcacc
aagaacaagctggagaccagaaggcagaatgggatccgtgaggctgtcaacctcctgagg
agaagcgggagcacagagatccagaaacagctgactgggctactctggaacctgtcctcc
actgacgagctgaaggaggagctggtggccgatgccctccctgttctgactgaccgagtc
atcattcccttctccggctggtgtgatggcaacagcaacatgtcccgggacgtggtggac
cccgaggtcttcttcaacgccacgggctgcttgaggtacgagaagacggaacctaggtca
ttcttggcactttgcccctcctccctggtcctctcccgcaggaacctgagctctgctgat
gctggccgccagaccatgcggaactactctgggctcattgactccctcatggcctatgtc
cagaactgtgtggctgccagccgctgtgatgacaagtctgtggagaactgcatgtgtatc
ctgcataacctctcctaccgcctggatgccgaggtgcccacccgctaccgccaactggag
tacaacgctcgcaacacctacactgagaagtcctccactggctgcttcagcaacagggga
gacaagatgatgaacaataactacgactgcccccttcctgaggaggagagcaaccccaag
ggcagcagctggctgtaccactcagatgccatccgcacctacctgaacctcatgggcaag
agcaagaaggatgcaaccctggaggcttgtgccggggccctacagaacctgacagctagc
aaggggctgatgtccagtggtatgagccagttgattgggctaaaggaaaagggcttgcca
caaatcgcccgcctcctgcaatctggcaattcagatgtggtgcggtccggggcctctctg
ctgagcaacatgtcccgccaccctgtgctgcacagaatgatgggaaaccaggtgtttcca
gaggtaaccagactcctcaccagccacactggcaacaccagcaactctgaagacatcttg
tcctcagcttgctacactgtgaggaacctgatgacctcgcaaccgcagatggccaagcaa
tacttctccagcagcatgatcaacaatgtcttcaacctgtgtcgcaacagtgcctcaccc
aaggctgcagaggctgcccggctcctcctgtctgacatgtgggctagcaaggagctgcaa
ggtgtcctcaggcagcaaggtttcgataggaacatgttgggaaccatagctggggccaac
agcctcagaaacttcacctcccggttctaa
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