Arvicola amphibius (Eurasian water vole): 119828067
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Entry
119828067 CDS
T08327
Symbol
Tnfrsf11a
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11A isoform X1
KO
K05147
tumor necrosis factor receptor superfamily member 11A
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04060
Cytokine-cytokine receptor interaction
aamp04064
NF-kappa B signaling pathway
aamp04380
Osteoclast differentiation
aamp04917
Prolactin signaling pathway
aamp05323
Rheumatoid arthritis
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
119828067 (Tnfrsf11a)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
119828067 (Tnfrsf11a)
09150 Organismal Systems
09152 Endocrine system
04917 Prolactin signaling pathway
119828067 (Tnfrsf11a)
09158 Development and regeneration
04380 Osteoclast differentiation
119828067 (Tnfrsf11a)
09160 Human Diseases
09163 Immune disease
05323 Rheumatoid arthritis
119828067 (Tnfrsf11a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
aamp04050
]
119828067 (Tnfrsf11a)
04090 CD molecules [BR:
aamp04090
]
119828067 (Tnfrsf11a)
Cytokine receptors [BR:
aamp04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
119828067 (Tnfrsf11a)
CD molecules [BR:
aamp04090
]
Proteins
119828067 (Tnfrsf11a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RANK_CRD_2
TNFR_c6
Chordopox_A13L
Tetraspanin
Motif
Other DBs
NCBI-GeneID:
119828067
NCBI-ProteinID:
XP_038206024
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Position
12:109203897..109280668
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AA seq
639 aa
AA seq
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MASRARRRRPLSVLLQGLGLLLVPLQVTLLVAPPCTQERHYEHLGRCCSKCEPGRYLSSK
CTTTSDSVCVPCGPDEYLDTWNEEDKCLLHKVCDAGKALVAVDPGNHTAPRRCACTAGYH
WNPDCECCRRNMECAPGFGAEHPLRLNMDTVCTPCLLGFFSDVFSSTDKCRPWTNCSLLG
RREAQPGTNKSDVVCSSSLTLRKPPKEAQIYLPSLVILLLFVSVALVAAIIFGVYYRKGW
KDLTANLWNWVNDACSSLSGNQESSGDCCVGAHSATSGHQEAREGVLLMTLGEKMLPKNM
CYLEGGSGVCEPVCAAGGPCAEGRDARMFTLVSEVEIQGDLSRKIPTEDEYTDRPSQLSD
GSLFLIQPGSKSTPPFQEPLEVGENDSLSQCFTGTESTAESEGCSFLAPPCRTDCIPLSP
EKYLKREIEDDSCLPWVANSNSTDGYPGCGNTPGEDHEPLLGSLKCGPLPQCAYSMGLPS
EAAASMAEAGGQPQDRADAKLPSSERGASGSGGSPSDQPPVSGNVTGNSNSTFISSGQVM
NFKGDIIVVYVSQTSQEGPGPAEPEPEPEPVGRPVQEETLARRDSFAGTAPRFSDSCGTG
AGLQEQGTYGTKDGTSRPVQEQGGARGSRSTLGSGQCAE
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgcgcgcccggcggcgccgcccgctgtcagtgctgctgcagggactcggcttg
ctgctcgtcccgcttcaggtgaccctcctggtggctcctccatgcacccaagagaggcat
tatgagcaccttggacggtgttgcagcaaatgcgaaccaggaagatacctgtcttctaaa
tgcaccactacctctgacagtgtgtgtgtgccctgtggcccagatgaatacttggacacc
tggaatgaagaagataagtgcttgcttcataaagtctgtgatgcaggcaaggccctggtg
gcagtggaccctggcaatcacacggctccacggcgctgtgcctgcacagccggctaccac
tggaacccagactgcgagtgctgccgccgtaacatggagtgtgcgcctggcttcggggcc
gagcatcccttgcggctcaacatggacacggtgtgcacaccctgcctcctgggcttcttc
tcagacgtcttctcatccacggacaaatgcagaccctggaccaactgttccctccttgga
aggcgagaagcacagccagggacgaataaatcagacgtggtctgcagctcttccctgacc
ctgagaaaaccacccaaggaagcccagatttacttgcccagtctcgtcattctgctcctc
ttcgtctctgtcgcattagtcgcggccatcatctttggcgtttactacaggaagggatgg
aaagacttgacagctaatttgtggaactgggtcaatgatgcttgcagcagcctaagtgga
aaccaggagtcctcgggtgactgctgtgttggtgcacactcagcaacctctggtcatcaa
gaagcacgtgaaggagtgttactgatgactctaggggagaagatgcttccaaaaaacatg
tgctatctggaaggtggttctggggtctgtgagcctgtgtgtgcagcaggtggaccctgt
gccgagggtagagatgccaggatgttcacattggtcagcgaagtcgagatccagggggac
ctctcaaggaagattcccacagaggatgagtacacagaccggccctcacagctctctgat
ggttcgctgttcctgatccagcccgggagcaaatccacaccccctttccaggagcctcta
gaagtgggggagaatgacagtttaagccagtgtttcacagggactgagagcacggctgag
tccgaaggctgcagcttccttgcacccccatgcagaactgattgtatccctttgtccccc
gaaaagtacttgaaaagagaaatagaggatgacagttgcctgccctgggtggccaactcc
aactcaacagatggctacccgggctgtggaaacactcctggggaggaccatgaaccgctt
ctgggttctctgaaatgtggacccttgccccagtgtgcctacagcatgggccttcccagc
gaagcagcagccagtatggcagaggcaggaggacagccccaggacagggctgatgcaaag
cttccaagctcggagaggggggcctcaggatctgggggttcccccagtgaccagccacct
gtatctgggaacgtgacgggaaacagcaattccacgttcatctctagtggacaggtgatg
aacttcaagggcgacattatcgtggtgtacgtcagccagacctcgcaggagggcccgggc
cctgcggaaccggagccggagccggagcccgtgggccgcccggtgcaggaggagacgctg
gcgcgcagagactccttcgcgggcacggctccgcgcttctccgactcgtgtggaaccgga
gccgggctccaggaacagggcacctacgggaccaaggacgggacgtcgcggccggtgcag
gagcagggcggggcacggggttcacgcagtaccctgggctccggacaatgtgcagaatga
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