Asterias amurensis (Northern Pacific seastar): 139944675
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Entry
139944675 CDS
T10870
Name
(RefSeq) TNF receptor-associated factor 6-like
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu04120
Ubiquitin mediated proteolysis
aamu04140
Autophagy - animal
aamu04144
Endocytosis
aamu04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
139944675
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139944675
04140 Autophagy - animal
139944675
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
139944675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamu04131
]
139944675
04121 Ubiquitin system [BR:
aamu04121
]
139944675
Enzymes [BR:
aamu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139944675
Membrane trafficking [BR:
aamu04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
139944675
Ubiquitin system [BR:
aamu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
139944675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4
zf-C3HC4_2
TRAF3_RING
zf-C3HC4_3
zf-C3HC4_4
zf-RING_UBOX
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
zf-Nse
zf-TRAF_2
LRRFIP
ATG16
Motif
Other DBs
NCBI-GeneID:
139944675
NCBI-ProteinID:
XP_071797848
LinkDB
All DBs
Position
11:complement(21447255..21460885)
Genome browser
AA seq
457 aa
AA seq
DB search
MADSVRSCSNDTSSTEVTGGYDAEFEPALDPKYICPVCLAALRSPLQTKCGHRFCKMCMQ
KIIGPRPYTKCPVDKTWLNVKSDIFDDVAFEREILSMTVLCSNVRSGCEWRGDLRNLQSH
SDTCLFAKLVCPNGCEEQYLRGKTEEHLGDCPLHLLDCTHCSESFIRKDEMNHKLIRCPK
YPIECAECGHRGILREQMGKHIDVEEGDCPSSVVPCTFKAVGCDQKIKRCDLPAHNKDEL
SNHLHLVLAQSLTYKAQLKEQSEAMEVCHEQCHQLKSSFEQLNRNLNEKDKLLNQQVERI
SLLENTNYNGHLHWKIDLKSHMCRNNSTTCIVSPAFYTSQPGYKLCARLETDGHVTRNST
YTSLFIVLQKGDYDDQLHFPFSTTCKVTLFDQVKNTHERSDFTTIITCSNMSRAGMGNTR
DQFRGRLKFMQTDLLTSSRFCNDGVVFVQINVEFTPL
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggctgatagtgtaagatcctgcagtaatgacacatcatctaccgaagtgactggtggt
tatgatgctgagtttgagccagcactcgaccccaagtacatttgccctgtgtgtttagca
gcactgcgttcaccactacaaaccaagtgtggtcatcgattctgcaaaatgtgcatgcag
aaaataatcggccctcgtccatacaccaagtgtccagtggacaaaacctggctaaatgtc
aaaagtgatatatttgacgatgttgcctttgagagggaaatcttgtctatgacggttctt
tgtagtaatgtaagaagtggctgtgagtggagaggtgatctaagaaacctacagagtcac
agtgatacctgtttatttgcaaagcttgtatgtcccaatggatgtgaagagcaatacctg
agaggaaagactgaggagcatctaggagattgcccgctgcatctattggattgtactcat
tgcagcgagtcattcatcaggaaggatgaaatgaatcataaactgatacgttgtcctaag
tatcccattgagtgtgctgaatgtggacatagaggaatactcagagaacagatgggcaag
cacattgatgttgaggagggtgactgtcccagcagtgttgttccttgtacattcaaagct
gtaggatgcgaccaaaagatcaagcgctgtgacctgcctgcccataacaaagatgagtta
tccaatcatttacaccttgtcttggcccaaagtcttacctacaaagcacagctgaaggaa
caatctgaggcaatggaagtgtgtcatgaacagtgtcatcaactcaagtcgagctttgaa
caactcaacagaaatctgaacgagaaagacaaacttctgaatcaacaagtggaacgaatc
agccttcttgagaataccaactacaacggacatcttcactggaaaatagatctgaaatcc
cacatgtgtagaaacaactcaacaacctgtatcgtaagcccagccttctacaccagccaa
cctggctacaagctctgtgcccgcctagaaacggacggccatgtcaccagaaactcaacg
tacacctcattgtttattgtgttgcagaagggtgactatgacgaccagttgcattttccg
tttagcaccacatgcaaagtgacattatttgatcaggttaaaaacacacatgagcgatca
gacttcacaactatcattacatgcagcaatatgagtcgtgctggaatgggaaacactcga
gatcagttcaggggacgtctgaagtttatgcagacagacttgttgactagcagtcgattc
tgtaatgatggggtagtgtttgtgcagattaatgtagaattcacgcctttataa
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