Asterias amurensis (Northern Pacific seastar): 139945268
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Entry
139945268 CDS
T10870
Name
(RefSeq) thrombospondin-1-like
KO
K16857
thrombospondin 1
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu04145
Phagosome
aamu04148
Efferocytosis
aamu04350
TGF-beta signaling pathway
aamu04512
ECM-receptor interaction
aamu04820
Cytoskeleton in muscle cells
Brite
Membrane trafficking [BR:
aamu04131
]
Endocytosis
Phagocytosis
Opsonins
139945268
Glycosaminoglycan binding proteins [BR:
aamu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
139945268
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139945268
NCBI-ProteinID:
XP_071798704
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Position
1:10511479..10650994
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AA seq
1267 aa
AA seq
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MGRNTLPYVVAVCLMCSLLQCEFTTAFDEIDVINAAGISGRTPGIRETKTPDGNQAFKMR
PMERDLGTDQSTLERLLASMREDEGFMLIATVSQDSKNRGTIVSIDRSNGRTRGFGFHVD
RRNDVAVVQYAEFGSGEPRENSVEFSPLNIEKSDNELHTFVLDVRGNLVTLYMDCQLIGL
KILPSSFYVDMPSDNMKLRLGKGVTGLNNVSDFKGTLATVKFAFRTSTNDVLISQGCVMD
LGFASSSQLSYASSYPIPSVEDSQPSQIGDASMPGPESASGTNGASITHSDSADASNINR
PESNIPSHGVSFGSHSNDPNQGVMPPPIPYDPPFTPPLTNSDFVHPNAPPTEGTLKGMCA
LTCDQINNLNNQVQVLSEGYDEIWNQIEHIEHQKPPDWPTLNGCWYMKSFYEAGAVFKVD
KCKSCECSMDSGIPVVECSTIKCRPGKCTNPIIREGDCCETCPYDNLGWSDWAEWTSCSA
TCGQGMQHRGRSCDRTQFECNGNDVETRICYLDPCIEIIDGGWSNFTPWSCAVTCGNGTE
SRMRSCNSPRPKNGGRRCTGEADGAGREERPCHRPPCPVDGKWGLWSEFTGCTKTCDGGW
QERNRFCDSPAPAFGGSDCLGSTNNRRMCNEWPCPVDACLSSPCFDGVDCVSFTDGRYEC
KDCPVGYEGNGIVCNDINECNLVSDACFNFHGEHRCLNLVPGYTCRKCPNGYRGNQPAGM
GVYHAKRYKQQCIPINPCSEGTSNCHFDARCIFHGPYSDPQYGCKCKTGFAGDGIACGYD
SDLDGWPDDQLDCEDKGKYTHCTGDNCPALPNSGQEDTDGDGKGDACDDDDDDDLVNDSR
DNCQYHSNWAQNDVDDDGVGDVCDNCIFVANTRQEDTDGDGEGDVCDDDIDDDGILNYDD
NCMYVANAKQLDYDEDGYGDVCDNCPGIANPDQTDIDDDNVGDVCDTDADMDSDGHQDDL
DNCVDIPNSDQADHDLDGIGDACDFDDDNDGFEDIEDNCPLVPNPSQNDTNENGRGDSCE
FDFDGDGVSDMNDACPENSNIQRTDLSHFQLIKLDPEGSAQIDPHWIVRNRGQEMVQTIN
SDPGLAIGYDEFQAVQFSGTFYVNTERDDDYAGFVFGYQSNHRFYAVMWKQVTQKYWAPL
PTISEATAGLQLKLINSTTGPGEYLRNALWHTGDTGDQVKLIWSDDNKIGWKDFTAYRWT
LTHIPKTGYIRVTMHEGSKVLADSGALYDMTLQGGRIGLFCFSQEMVFFSDLEYKCIDNR
EPTTTTV
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atgggacggaacacacttccgtacgtggttgccgtttgcctcatgtgctcactgctccag
tgcgagtttacaacagcgtttgatgaaattgacgtcataaatgcagccggcatttcaggg
agaacgccgggtatcagagaaaccaaaacaccagatggcaaccaagccttcaaaatgaga
cccatggagcgagacctgggtacagaccagagcaccctggaaagacttctggcatccatg
agggaagacgagggcttcatgttgatagccaccgtctcacaggacagtaagaaccgcggc
acgatagtctcgatcgaccgatccaacggtaggacccgcggtttcgggttccacgtggac
cggaggaacgacgtggccgtggtgcagtacgccgagttcggctccggagagccccgggag
aactctgtggaattctcgccgctcaacatcgaaaaatcggacaacgagttacacaccttc
gtgctggacgtccgggggaacctggtcaccctttacatggactgccagcttatcggcctg
aagattctaccgtcgtccttttacgtcgacatgccctcagacaacatgaaacttcgtctt
ggcaaaggcgtcactggacttaataacgtctccgatttcaagggcaccctggccactgta
aagtttgccttccgcacaagtaccaacgatgtgttaattagccagggatgcgtgatggat
cttgggtttgcatcgtcctcacagctgagctacgctagcagctaccctatcccatcggtg
gaggattcgcaaccgagtcagatcggggatgcgtctatgcctggacctgaaagtgcatca
ggaaccaacggagcaagcataacccacagcgacagcgccgacgccagcaacatcaaccgt
cccgagagcaacatccccagccacggtgtgagcttcggaagccatagcaatgaccccaac
cagggtgtcatgcccccacccatcccttatgatccccctttcacccctcccctcaccaac
tcagacttcgtgcaccctaacgcgccaccaacggagggaacactgaagggaatgtgtgct
ttgacgtgtgatcagatcaataacctcaacaatcaggtgcaggtattgtccgaaggatac
gacgagatctggaatcaaattgaacacattgagcaccagaagcccccagattggcccacc
ctcaatggctgttggtacatgaagtcattttacgaggccggagccgtcttcaaggttgac
aaatgcaagtcgtgcgagtgcagcatggactcagggatacccgtggtagagtgttcgact
attaaatgcagaccaggaaaatgtacaaacccgatcatccgagaaggagattgctgcgaa
acatgtccctatgacaacctcggatggagcgattgggcagagtggacctcgtgctcagcg
acctgtggacagggtatgcagcatcgtggacggtcgtgcgacagaacacagtttgagtgc
aatgggaacgatgttgaaaccagaatctgctacctcgatccctgcattgaaattattgat
ggtggttggagtaatttcaccccgtggtcttgtgcagtaacctgcggtaatggaacagaa
agccgaatgcgatcgtgcaattcaccaagaccgaagaacggaggccgccgctgcactggc
gaggccgacggggccggaagagaggagagaccgtgccatagacccccttgtcccgttgat
ggaaagtggggcttgtggtctgagtttaccgggtgtaccaagacatgcgacggtggatgg
caagaacgcaaccgattctgtgacagtcctgccccagccttcggtggaagcgactgtctt
gggtcaaccaacaatagacgcatgtgcaatgaatggccatgcccggtcgatgcctgcctg
tcaagtccttgttttgacggtgtggattgcgtcagtttcactgatggccgttacgagtgt
aaggattgcccagtgggctatgaaggaaacggaattgtgtgcaacgatattaacgagtgc
aaccttgtgtccgatgcttgcttcaactttcacggtgagcaccgttgcttgaatttggtt
cccggctacacctgcagaaagtgccccaatggctacagaggtaaccagccggctggtatg
ggagtctaccacgctaaacgatacaagcagcaatgcatcccgatcaacccctgctcagaa
ggaacatctaattgccatttcgatgccagatgtatattccacggtccttattcagatcca
caatacggttgcaaatgcaagactggcttcgctggtgacggtattgcatgcgggtatgat
agcgacctggatggctggcccgatgaccaattggactgtgaagacaaaggaaaatacact
cattgcacaggggacaattgtccagctctgcccaacagtggccaagaagacactgatggt
gacggtaaaggtgacgcatgcgacgacgacgacgatgatgatctggtcaacgattctagg
gataactgccagtaccactccaattgggcccaaaacgatgtcgatgacgatggcgtcggt
gatgtgtgcgacaattgtatattcgtggccaacacacgacaagaggacactgacggtgat
ggcgaaggagatgtatgcgacgatgacatcgatgatgatggtatccttaattacgatgac
aactgcatgtatgtagcgaatgctaagcagcttgactatgacgaggatggctatggtgat
gtgtgcgataactgtccagggattgctaacccagatcaaaccgatatcgatgatgacaat
gtaggtgacgtgtgtgacaccgacgcggacatggacagcgacggtcaccaagatgacctg
gacaattgcgtggatatccccaacagcgaccaagcagatcacgatctagatggcattggt
gacgcttgtgacttcgatgacgacaacgatggatttgaggacattgaggacaattgtccg
ttggtacccaaccccagtcagaatgacactaatgaaaacggacgtggtgactcctgcgag
tttgacttcgatggtgacggtgtatccgacatgaacgacgcatgcccagagaactccaat
atccaacggacggacttgtcgcacttccagctgatcaaacttgaccctgaagggtcagca
cagatcgacccacattggatcgtcaggaatagaggtcaagaaatggtacagaccattaac
agtgatcctggtcttgctataggttatgatgaattccaagcggttcagttcagtggtacg
ttctacgtcaacacagagcgagatgatgattacgctggcttcgtcttcgggtaccagtca
aatcaccgattctacgcagtaatgtggaaacaggttacgcagaagtactgggcaccgttg
ccgaccatatcagaggctacagccggtctccaactcaagttgatcaattcaacgacgggt
ccaggagaatatttaagaaatgctctgtggcacacgggagacacgggagatcaggtaaaa
ctcatctggagcgacgataacaagattggatggaaagatttcacagcttacagatggact
ttaacacacatacccaaaactgggtacataagagtgacaatgcacgaaggcagcaaggtg
ttggctgattcgggcgccctctacgacatgacattacagggtggccgaattggtctgttc
tgcttctcacaagagatggtgttcttctctgatctggaatataaatgcattgacaataga
gagcctaccacaactaccgtctga
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