Asterias amurensis (Northern Pacific seastar): 139949528
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Entry
139949528 CDS
T10870
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein 1-like
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aamu03036
]
139949528
03400 DNA repair and recombination proteins [BR:
aamu03400
]
139949528
Chromosome and associated proteins [BR:
aamu03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
139949528
DNA repair and recombination proteins [BR:
aamu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
139949528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMCHD1_S5
Ig_SMCHD1_1st
Ig_SMCHD1_2nd
Ig_SMCHD1_8th
Ig_SMCHD1_5th
Ig_SMCHD1_4th
Ig_SMCHD1_6th
Ig_SMCHD1_7th
HATPase_c_3
SMC_hinge
HATPase_c
DUF6801
Big_1
TRPM_tetra
Motif
Other DBs
NCBI-GeneID:
139949528
NCBI-ProteinID:
XP_071804006
LinkDB
All DBs
Position
17:1015000..1103274
Genome browser
AA seq
2025 aa
AA seq
DB search
MAANSKSKTLEADSKTLDEEDSVVFVYDRRKGNDPERLIHLGGIFNYQTFKERIRQEFNI
GTTTHIVIATTNRQEVKDDKGYEELVDHYDTLYILNHISQVLPAPTKERVEYLPHYDTLV
KSGMYEYYASEGQNPLPFAFAELIDNSLTATSENLGPRQIELRLFLDESGDKSMICVIDN
GKGMTSRQLNNWAIYRLSKFSRKERKHKKGDEEEDDDESTASVPENVPRSLNSDISYFGV
GGKQAIFFIGHATRMVTKPKDSRDVHELAISKEQFERREKNRESIYSGFISNRPVGDHRH
LDTEDPNMKQLICDEIGKESFTHVFITGISQHHVQYLRHDFIGWCKQLAHIYHYYIHGPR
GNEVSGLGNKRPISPFKNIDISISLHDKGKSPRTINLRDIAQDMQTKYIRSAVDSFEFRA
VVEGTGIVEGILRYHPFLYERETYPCEGETRGEYDNAEDRDYYNEVRPARGNRPIFECYW
NGRLIPYTCVENFDWCAVPKKRGSIPTECYNRISGVLWTNDKFEISTNKLTFMDLEVRLR
DKNTIFQKIILGQAQRVKIDRQFSEWLRECHESFDKQVKFSGFEGIISRPEITVKRQQSP
WAVFKAIEWDGKEFTRGQLVRTIRTVPIMNATIKRFLLFGHHEGDVFATGGEMEITQEPA
LLYNEVRIVPLCKLDRTTNDRTLKKYIEEEEGKLPEKLVVTWPDGYEIKQGERKPAGSTV
GAIQIDIKNRKGESISRLPGSHLTPKKLLVELKVIWHAPNGDEELVSHLSQHVKAWGFWF
KKMENMKNLGNHTIKVQVVLNESGVTEFGGKPLPSQKIKFSITEAAPNKFSVGLLDPPFR
VGLPFTIPLELQDEFNHSTKPIADMKPVLEASGLELSYDGVQAKGTTLLVKNVTAIGDVG
SFQGKNFTLKVTLPGLAFPTQMMKIRLAPGQPCSLHVPTFDEDITIENGQALTVDIEVRD
KAGNVTMHPKLNVNCKFLGTAGLPTYCGDCSFSGKTRLTGNVIYLKNMKKGQKITAKVSL
LNFNDIAPVEKVIQVFPNSNPCYMDMWYTEDNTRKKLRHQEEVKWQAGQPIKGILFVLFD
EGGRQIPITADIASKVKVSWMPRVSQEKLLQGILPDIKVPSSAADSKYVQVSLSDGSGLE
FGFTIRPEPGEVAQIKCVCQGSKKARLGEVLEPDIIVNVTDINGNRIKKVPHGALSHLEV
TGEGLKTKQLQKVILPNTGFALRQIRFEGGNLGQRELCIKYHDFTDYIKLQMMAGLPTQL
TFVDPALNEPILVYSNAKIDKNLTVQLCDESGNPTSDSNVRLTLIPSTNLQLSHVHLQSK
ADKEGRATFGKPLVVAQTGHHKLTIKATLGRSTLVLAADIYVQPDPNKITSVEVDFQNPN
NFLLPAGGTFPDFDVSVRAENGSIFTKLSPKNVLMRIWKVGSSADSSKASLQAVSYVPDT
RLEEDKPGHFYFRNRTVPEVAGQHNLIFQIHVGTSDANVIVSKVMCYTIHPEVPFKLAPD
TRQAMLTVSNTHKSHSRSLVKTLKLQLKDKYGNATGTNISGKVTVTLCGENDSEIPMLVG
NKSTAAFNMNKGVVTVQSLVLQESTPGKDGGEYSMKVEVDSPQLKQHDVEAYTQPFLFYN
DAKKQYRMAQLTKERDTLLQTINAFQGFFQTTDKLVEEMKYSVEEVMQNENQIKSELRKM
GSLMNQINTVSNIQSYIEQLERDNETLLLKPRRQCGLNPYLGLNDPDVLGRVGQLAKVED
DTIAHVLSWHMVSDMDCLITKTNAAAMRVHKATNGRQQLLPIDSIYKKNQEWNRPLPHLR
YLKNYRPTGNPVFARALLRFPVHEEECKLVFGMLLADTIIFDTLEDATAYRQELVKVTYC
PPLLTRDGNRIRSNGKFGGSQNQFLSLEKLKGAVFGAPIPESCRRLAKLKELAESLEQVM
QKRIEAARELQAQKEEQNSASMRNKRRECQEAKEQLALIEKKLGVAQSGQTLESQENSSR
VPLHGKRGRSMSRSPAMPMEDLSSPGTPRTRRTPNHSASPAKRRR
NT seq
6078 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaactcaaagtcaaagactttggaagctgacagcaaaaccttagatgaagaa
gactccgttgtgttcgtttacgaccgtcgaaagggaaatgatccagagcgactaatccat
ctaggaggcatatttaattatcagacattcaaggaacgcattcggcaggaatttaacata
ggaacaaccactcacattgtgattgctacaaccaacagacaagaagttaaagatgacaaa
ggatatgaggaattggtggaccattatgacaccctgtacatactcaatcacatcagccaa
gtactaccagcccctacaaaggaacgtgtggagtacctaccccattatgacacacttgtt
aaaagtggaatgtatgagtactacgccagtgagggacagaacccactgccatttgccttt
gcagagttgattgataactcattgacagctacaagtgaaaatcttggcccaagacaaata
gagctgagattgttcctggatgaatctggtgataagagcatgatctgtgtaatagataat
ggcaaaggcatgacatccagacaactgaacaactgggccatctatcgcctctcaaaattc
tctcgtaaagagagaaagcacaaaaagggagatgaagaggaagatgatgatgaatctaca
gcctcagtaccagagaatgttcctcgatcactcaatagtgacatctcatactttggtgtt
ggaggcaagcaagcaatattcttcattggccatgcaacaagaatggttactaaaccaaaa
gactctcgagacgttcatgaactggccatctctaaggaacaatttgagagacgagagaag
aatcgagagtcaatttacagtggatttattagcaacagaccggttggcgatcacagacac
ctggacactgaggatccaaacatgaagcaattaatttgtgatgaaataggcaaggaaagt
ttcacacatgtattcataacaggaatcagccaacaccatgttcagtacctcagacatgac
ttcataggatggtgtaaacagctagcccacatctatcactactacattcatggaccgaga
ggtaatgaggtatctggcctgggcaacaagagacctataagtccattcaagaatattgac
atcagcatcagtctacatgataaaggcaaatcacctcgcacaatcaacctacgagatatc
gcccaggatatgcagacaaaatacatccgcagtgcagttgattcctttgagttccgagca
gttgttgaaggaactggtattgttgaaggcatcttaagatatcatcccttcctctatgag
agagagacttacccttgtgaaggggagactcgaggtgaatatgataatgctgaagataga
gactactacaatgaagtcagaccagctaggggtaatcgaccaatctttgaatgctactgg
aatgggagactaattccatatacatgtgtggagaactttgattggtgtgctgtgccaaag
aagcgtggatccattcccactgaatgttacaatagaatatcaggtgttctgtggaccaat
gataagtttgagattagtaccaacaagttgacatttatggatctagaggtcaggctcaga
gacaagaataccatctttcagaagatcatccttgggcaggcccagcgtgtgaagatcgac
cgtcagtttagtgagtggttaagagaatgccatgaatcctttgataagcaggttaaattt
agtgggtttgaggggataatatcacggccagagataactgtgaagagacaacagtcacca
tgggcagtcttcaaggccattgagtgggatggaaaggagttcacaagaggacagctggtg
cgaacgatacgtacagtgcctatcatgaacgcaaccatcaagagattcttactgtttggt
catcatgagggagatgtgtttgccacaggaggagaaatggaaataacacaggagcctgct
ctgttgtacaatgaggtgcggatagtcccgctgtgcaagttggatcggaccacaaatgac
aggacgttaaagaaatacatagaggaagaagagggaaagcttccagagaaactggtagtg
acttggcctgatggttatgagatcaaacagggtgaaagaaaacctgctggcagcactgtg
ggagctatccaaatagacatcaagaatcgtaaaggagagtctatctcacgtctacctggc
tcacatctcactcctaagaagcttctagtagagctcaaagtcatctggcatgcacctaat
ggtgatgaggagttagtatcccatctaagtcaacatgtcaaggcctgggggttctggttc
aagaagatggaaaacatgaagaaccttgggaaccataccattaaggtacaggttgtactg
aatgagagtggagtgacagagtttgggggtaaaccactaccaagccaaaagatcaagttc
agcattacagaggctgctcctaataagttcagcgtgggtctcttagatcctcccttcagg
gtagggttgccttttaccatccctctggagctccaagatgagttcaatcattctactaaa
cctattgcagatatgaagccagtactggaagcaagtggactagaactaagctatgatggt
gtccaagctaagggaacaactctccttgtgaagaatgtgacagccataggtgatgtggga
tccttccaaggcaagaacttcacccttaaagtgactctaccaggcctggcattccccaca
cagatgatgaagatcagattagctcctggccagccgtgttctctacatgtacctacattt
gatgaggatatcacaatagagaatggtcaagcattgacggtagacattgaggttcgagat
aaagcaggcaatgttactatgcatccaaagctcaatgtcaactgcaagttccttggtaca
gcaggattaccaacatactgtggagactgcagcttctcaggcaaaacaagactgactgga
aatgttatctacctcaagaatatgaagaaaggacaaaaaattactgccaaagtttcatta
ctgaacttcaatgacattgcaccagtagagaaagtgatccaggtgtttcccaactccaac
ccatgctatatggatatgtggtatactgaagacaacacacgaaagaaactaagacatcaa
gaagaagtcaaatggcaagctggtcagcccattaaaggcatattgtttgtattgtttgat
gagggcggcagacagataccgattacagcagacattgctagtaaagtcaaggtgagctgg
atgcctcgtgttagtcaagagaagcttcttcaaggaatactacctgatattaaagtgcct
agctctgctgcagactctaaatacgtacaagtcagtctatcagatggatcaggattggag
tttggcttcactattaggcctgaaccaggagaggttgctcagatcaagtgtgtttgtcaa
ggctccaagaaggctagacttggagaggtgctagagccagatatcattgtcaatgtgact
gacatcaatggaaatagaataaaaaaggtacctcatggtgccctgagccatcttgaggta
actggggaaggtttaaagaccaaacagcttcagaaggtgattctaccaaatactggcttt
gctctgaggcaaatacgctttgaaggaggtaaccttggacagagagaactctgcattaag
taccatgacttcactgattatatcaaactacagatgatggcaggactcccaactcaactc
acattcgttgatccagcattgaatgagcctatattagtctacagtaatgccaagatagac
aagaacttaacggtacaactatgtgatgaatctggcaacccaacatcagactccaatgtg
cgcctgactctcatcccatccactaacttgcagctaagccatgttcatctccagtctaaa
gcagacaaagaaggacgtgcaacatttgggaagcctcttgtagtagcccaaactggacat
cacaaactgacaataaaggcaacactgggccgcagtacgctggtcttagctgctgatatt
tatgttcagcctgatcctaacaagataaccagcgtggaagtagattttcaaaatcctaac
aatttcttgttgcctgctggtggaacctttccagattttgatgtcagcgtgcgagctgaa
aatggcagcatattcacaaaactctctcctaaaaatgtgctgatgagaatatggaaagtt
ggctcttccgctgatagcagtaaagcatccctccaagctgtgtcttatgttccagatact
agattggaagaggataaacctggacatttctatttcaggaatagaaccgttccagaagtg
gccgggcagcataatttgatcttccaaatacatgtaggaacctctgatgccaatgttatt
gttagcaaagtgatgtgctacaccattcatccggaggttccattcaaacttgcccctgac
acaaggcaagcaatgttaaccgtgtccaacacacacaagtctcacagtagatcacttgtc
aaaacacttaagcttcaacttaaggacaagtatggtaatgcaacaggaacaaatatctca
ggcaaggtgactgtgacattatgtggagagaatgatagtgaaataccaatgctggttggt
aacaagtcaacagctgcttttaatatgaacaaaggagtggtcacagtacagagtttagtg
ttacaggaaagtacccctggtaaagatggtggagaatattcgatgaaggttgaagttgac
agtccacagttgaagcaacatgacgtggaggcatacactcaaccattcctcttctataat
gatgcaaagaagcaatatcgtatggcacagttaaccaaagagagagatacattattacaa
accattaacgcgtttcaaggattctttcagacgacggataaacttgttgaagaaatgaaa
tattctgtggaagaagtgatgcaaaatgagaaccaaatcaaatctgagctcaggaagatg
gggtcccttatgaatcaaattaacacagtgagcaatattcagagctacattgagcagtta
gagagagataatgaaaccctgctgctgaaaccaagaagacaatgtggtttaaacccctac
ctaggattaaatgacccagatgtacttggacgggttggtcagttagcgaaagtagaagat
gatacaatagctcatgtgttatcctggcatatggtatctgatatggattgtctgataaca
aagactaatgcagcagctatgagggtacataaagcaaccaacggcagacaacaacttcta
cctattgattctatctataagaagaatcaagaatggaacaggccgctgcctcacttacgc
tacctcaagaactacagacctacagggaacccagtgtttgcaagagccctgctcaggttt
cctgtgcatgaagaggaatgcaaactagtctttggtatgcttctagccgataccatcatc
tttgataccttggaagatgccacagcgtacagacaagagcttgttaaagtcacatactgc
cctcctcttcttacacgagatggtaaccgtattcgcagcaacggcaaatttggaggctct
caaaatcagttcctatccttggagaaattaaaaggcgctgtatttggagctccaattcca
gaatcatgcagacggcttgctaaacttaaagagttggctgagagtctagaacaggtaatg
cagaagagaatagaagctgcacgtgaactacaagcacaaaaagaagagcagaactctgcg
tccatgaggaataaacgacgagagtgtcaagaagctaaggaacagttagcactcattgag
aagaaacttggtgtggcccagtcaggtcagacacttgagtcccaggaaaactctagtcgt
gttccactgcatggtaagagaggccgttccatgtccagatcaccagcaatgccaatggag
gacttatcatccccggggaccccaaggacaaggcgcactccaaaccactctgcctctcct
gctaagagacgcagatga
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