Anguilla anguilla (European eel): 118232420
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Entry
118232420 CDS
T07545
Symbol
kdm2ab
Name
(RefSeq) lysine-specific demethylase 2A isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
118232420 (kdm2ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aang03000
]
118232420 (kdm2ab)
04121 Ubiquitin system [BR:
aang04121
]
118232420 (kdm2ab)
03036 Chromosome and associated proteins [BR:
aang03036
]
118232420 (kdm2ab)
Enzymes [BR:
aang01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
118232420 (kdm2ab)
Transcription factors [BR:
aang03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
118232420 (kdm2ab)
Ubiquitin system [BR:
aang04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
118232420 (kdm2ab)
Chromosome and associated proteins [BR:
aang03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
118232420 (kdm2ab)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
118232420 (kdm2ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
JmjC
F-box
PHD
Cupin_8
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
118232420
NCBI-ProteinID:
XP_035283298
LinkDB
All DBs
Position
7:29219296..29284130
Genome browser
AA seq
1329 aa
AA seq
DB search
MTATRSAIKNTRLYRSGTRRRYQDDGISDDEIEGKRSFDLEEKLQSDQFSSCLVKRMEGK
DFTFEYIQREGLRDPIIFEKPDGLGIQMPDTDFSVNDVKLFVGSRRVVDVMDVTTQKGIE
MSMAQWRRYYETPPAQREKLYNVISLEFSHTKLENLVKRPASVDIIDWVDNMWPRHLKER
QRDSTNAIIDMQYPKVQKYCLMSVEGCFTDFHVDFGGTSVWYHVLRGGKVFWIIPPTPRN
LELYENWVLSGKQGDIFLGDKATECQRIELKQGYTFMIPSGWIHAVYTPVDTLVFGGNFL
HSFNIPMQLHINNIEDRTRVPAKFRYPFYYEMCWYVLERYLYCLTNTSHLTPEFQKHSLG
VGLKREDVLNQCVKEDSLLSSSGEEEKLTPTPSKPGVKVHLTPFELEGLWNLLGKLESLP
SHKKCVPAGIHNAPALLHDIRTLLLEHATDDPKLAYTGIPIVRWPKRPSWYQPLPPPLLL
QRPRLSSLPHPQPSRRPVKPPSSISALRRRRVRCKRCEACLRTECGDCNYCRDMKKFGGP
GRLKQTCVLRQCLAPGLPLSAVCVVCGEGNQDADETPLTLMECSNCAQITHPDCLKVPAE
GVVNRDLPSCWECPKCILERGCTSVSSSSSDDDSIASAYSISPSVPPPAKRSHRDGVGYK
AGDSGGGVRVSHRSQGALISTLSEPRSRRMVPPPSHRLLLQQQQNRRRAGALEMRLRRRK
RKASSPDSCSPKLHRQKQDHDSYEGSDQLGRGLRGPQSLRGSGRRLHRRGRARGCWLWRG
SAYQAGQGGRLARDPPLGLSPRLRMGVQNSRGERGRGWVRLRGGGRSQRRRVEMEEEEKE
DEEEGDEEREEEGQRRGRLDKENRPHRRRGRVRENEEEEKEDCNGGRCWGGTEEDEEEGE
DGREAKPDPVLLVSDLSEGPVNGSYLTVTLQRPSKAKRDPSAIVPKLEAAVAARAPPLPP
LGQGYVQCKSLLRPKFKLKNGVESVVGGHATSSAFGRLEQRGVSSEPRVTLCRLDKNKEG
SCPSTSSFSSSTLAMPAPSSILSHPLLREVGNEPGCEKEVWVSVFRYLTRAELCLCMTVC
KSWYKWSCDKRLWTRIDLSRCHSISPQALSGVIKRQPVSLDLSWTSISKKQLTWLINRLP
GLKDLTVSGCSWSLVSALSSPSCPLLRTLDLRWAEGVKDMQMRDLLTPPGCDNRSKLRNL
QSFRLAGLEISDSTLRLIIRHMPLLARLDLAHCRGITDQSINLLTAVGSSTRNTLAEINL
AGRVQRESLRCSKLTDTCLSYLRRVTSLSLLDLRCCEHITRQACESFIYELSVNALYCLS
EDKLIQRIS
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atgacagcaacaagatcagcaattaaaaacacaagattatatcggtcaggtacacggcgg
cgttaccaagatgatggtatctctgatgacgagattgaggggaagaggagctttgacctg
gaagagaaactgcagagtgaccagttcagttcctgtctggtcaagcgcatggagggcaaa
gatttcacttttgagtacattcagagggaagggctgagggaccccatcatctttgagaaa
ccagacggcctgggcattcagatgccagatacagattttagtgtgaatgacgtgaagctg
tttgttggcagtcggagggtagtagatgtgatggatgtgaccactcagaaggggatagaa
atgtcgatggcgcagtggagacggtactatgagactccacctgcccagcgggagaaactc
tacaatgtcatcagcctggagttcagccacaccaaactggagaacctggtcaagaggcct
gcatcggtggatatcatcgattgggtggataacatgtggccacgacacctgaaggagaga
cagagagactccactaatgccatcatcgacatgcagtaccccaaagtacagaagtactgt
ctgatgagtgtagagggctgtttcacagacttccacgtcgacttcgggggcacctcggtc
tggtaccatgtattgcgtgggggcaaggtgttttggataatcccgccaacaccccggaac
cttgagctgtacgagaactgggtgttgtcagggaaacaaggcgacatcttcctgggtgac
aaggccacggaatgccagaggattgagttgaagcaggggtacacatttatgatcccctca
gggtggatccatgctgtgtacacgcccgtcgatacgctggtgtttggggggaactttctt
cacagcttcaacatccccatgcagcttcacatcaacaacattgaggaccgaacacgggtc
ccggctaagtttcgctaccccttctactatgagatgtgttggtatgtgctggagaggtac
ctgtactgcctgaccaacacctcacacctcacacccgagttccagaaacactcacttggc
gtaggactaaagagagaagatgttcttaatcagtgtgtgaaggaagattcattgttgtca
tcatcgggggaggaggagaaactcacccctaccccctctaagccgggggtgaaagttcat
ctgacgccatttgaactggaggggctgtggaatctgttggggaagctggagtcactcccc
tcccacaagaagtgtgttccagctggaatccataatgctcctgccctgctgcacgacata
aggaccctgttgctggaacatgccactgacgaccccaaactggcctacactgggataccc
atagtcaggtggccaaaaaggccctcatggtaccaacccctaccaccacccctcctgctg
cagcggcccaggctgtccagcctgccccatccccagccctcccgacgtcctgtcaaaccc
ccgtcctccatttcggctctgcgaaggagaagggtgcgctgtaagcgctgcgaggcctgt
ttgcgcactgagtgtggcgactgcaactactgccgcgatatgaagaagttcggtgggcca
ggccggctcaaacagacctgtgtactgagacagtgcctcgctccggggctacctctctca
gcagtgtgtgttgtttgtggtgaggggaatcaggatgctgatgaaactccccttaccctg
atggagtgttccaactgcgcccagatcactcaccctgactgcctaaaggtaccggcagag
ggtgtggtgaacagagacctgcccagctgctgggagtgccccaagtgcattctggaaaga
ggctgcacctcagtgtcctccagtagcagtgatgatgacagcattgcctctgcctactct
atctccccgtctgtgccccccccagctaagcgctctcacagggatggtgttgggtacaag
gctggtgacagtggaggcggggtcagggtctcgcaccgcagccagggtgctctgatctcc
accctgtctgagccgcgatcacgccgcatggtgcctcctccctcacaccggctgctattg
cagcagcagcagaacaggaggcgggcaggggctctggagatgcgcctcaggaggcggaag
agaaaggcttcctctccagactcctgttctcctaaactccaccggcaaaaacaggaccac
gacagctacgagggcagtgaccagctggggcgaggcctgagaggtccccagtccctgagg
gggtcagggagacgtctgcaccgtaggggcagggccaggggatgctggttatggaggggt
tctgcctaccaggcggggcaggggggcaggcttgcccgagacccgcccttgggcctgagc
cctcgactcaggatgggtgtacagaacagccggggagagagggggaggggctgggtgcgt
ctgagaggaggggggcggagccaacggcgcagggtggagatggaggaagaagagaaggag
gatgaggaggagggagatgaggagagggaggaggaggggcaacgtagggggaggctggac
aaggagaacaggccacaccgacggagagggagagtgagggagaatgaggaagaggagaaa
gaagattgcaatggaggtaggtgctggggcggaacagaagaggatgaagaagaaggtgaa
gacggcagagaggccaagcccgatccggttctgctggtttcggacttgagcgaggggccg
gtgaatgggtcttacctgacagtgactctgcagcgcccgtcaaaagccaaacgtgacccc
agcgccatcgtgcccaagctggaggcagctgtggccgcccgggccccccctctccctcct
ttgggacagggctacgtccagtgcaaatccctgctgcggcccaaattcaaactcaaaaat
ggggtggagtcagtggtgggaggccatgccaccagttctgctttcggtcgcttggagcaa
cggggggtctcttctgagcctcgagtgacattgtgccgtctggacaagaataaggaggga
tcttgcccatccacttcctctttctcctcctccactttggctatgcctgccccttcctcc
atcctctctcatcccttgctcagggaagtggggaatgagccaggatgtgagaaggaggtg
tgggtgtcggtgttccgctacctgacacgagccgaactgtgtctctgcatgaccgtctgc
aagagctggtacaagtggagctgtgataagcgtctgtggacacggatcgatttgagtcgc
tgccactccatcagcccccaagccctgtcgggggtaatcaaacgccagcccgtctccctg
gacctgtcctggacctccatctctaagaaacaactcacctggctcatcaaccgtctccca
ggtctgaaggacctcacggtttcggggtgctcttggtccttggtttcggccctcagctcc
cccagctgtcccctactgcggaccctggacctgcgctgggccgagggggtgaaggacatg
cagatgcgagacctgctgactccaccaggctgcgataaccgcagcaagctcaggaacctg
cagtcgttccggctggcggggttggagatcagcgactccacgctgagactcatcatcagg
cacatgcccctgctggcgcggctggacctggcccactgccgcggaatcactgaccagtcc
atcaacctgctgaccgctgtgggctcctctacccgcaacacactcgcagagatcaacctg
gccggtagggtgcagagggagagcttgcgatgcagtaagctgacagacacctgcctgtca
tacctgcgccgtgtcaccagcctgtcccttctggacctgcggtgctgcgagcacatcaca
cgccaggcctgcgagagcttcatctacgagctgtctgtcaatgccctctactgcctgtct
gaggacaagctcatccagaggatatcatag
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