Argentina anserina (silverweed cinquefoil): 126785032
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Entry
126785032 CDS
T10558
Name
(RefSeq) ABC transporter I family member 21-like
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126785032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aans03019
]
126785032
Messenger RNA biogenesis [BR:
aans03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
126785032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
ORC-CDC6-like
nSTAND3
NACHT
AAA_15
AAA
AAA_28
SMC_N
AAA_23
AAA_18
AAA_25
AAA_22
PduV-EutP
Zeta_toxin
SRP54
AAA_24
AAA_5
Arf
AAA_30
AAA_33
AAA_14
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
126785032
NCBI-ProteinID:
XP_050366564
LinkDB
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Position
2:complement(18800256..18802461)
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AA seq
283 aa
AA seq
DB search
MAEQQQETSTGITVTGMQFAYDAQPPLFYDFSLDIAPGSRCLLVGANGSGKTTLLKILAG
KQMVGGRDVVRVLNCSAFHDTHLVCSGDLAYLGGSWSKTVGSAGELPLQGDFSAEHMIFG
VEGTDPIRREKLIELLDIDLKWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVDLDVV
ARMDLLDFFKEECEQRGATIVYATHIFDGLETWATHLAYIQDGVLKRAQKLLEVEELKSS
VNLLSVVESWLRAETKQEKKKPKNPAHTSSPFGMSSRHMAYYR
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggcggaacaacagcaagagacctcgaccggcatcacagtcaccggcatgcaattcgcg
tacgacgcacagcccccgctcttctacgacttcagcctcgatatcgctcctggatcgcgg
tgccttcttgtcggcgccaacggatccggcaagacgactctgctgaagatattggcgggg
aagcaaatggtgggagggagagatgtggtgcgggtgttgaattgctcggcgtttcatgac
acgcatttggtttgtagcggcgacttggcctatttgggaggctcctggagcaaaactgtc
ggctctgccggagagctaccgctccaaggagacttctctgctgagcatatgatatttgga
gttgagggaactgatccaatcaggagagaaaaattgattgagctgcttgatatcgatttg
aagtggcgaatgcataaggtatctgacgggcagcggcgcagagtacaaatctgcatggga
cttctccatcctttcaaggtactattgcttgatgaggtaacagtcgacttggatgttgtt
gctagaatggacttattagatttcttcaaagaagaatgtgagcagagaggagcaacaatt
gtatatgcaacacatatctttgatggcttggaaacatgggcaacacatttagcttacatc
caagatggtgtgctaaagagggctcagaagttattggaggttgaagagttgaagagttct
gtcaatctgctttctgttgtggagtcctggcttcgtgctgagaccaagcaagagaaaaag
aaacccaaaaatcctgcccacacatcatctccttttggtatgtcgtcaagacacatggca
tattaccgctga
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