Argentina anserina (silverweed cinquefoil): 126799739
Help
Entry
126799739 CDS
T10558
Name
(RefSeq) ABC transporter I family member 20-like
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126799739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aans03019
]
126799739
Messenger RNA biogenesis [BR:
aans03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
126799739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_15
AAA_29
AAA_25
Arf
AAA_23
AAA
Zeta_toxin
ORC-CDC6-like
nSTAND3
TsaE
AAA_30
AAA_7
Motif
Other DBs
NCBI-GeneID:
126799739
NCBI-ProteinID:
XP_050382960
LinkDB
All DBs
Position
6:3663077..3664672
Genome browser
AA seq
320 aa
AA seq
DB search
MGVKQDSTEPTIVINRLKFTYPGINGHPPPGAKPLIEDFSLTLNAGDRCLLVGSNGAGKT
TILKILGGKHMVDPSMVRVLGRSAFHDTALTVSGDLSYLGGEWRRDVAFAGFDVPIQMDV
SAEKLINGVAGIDPNRRAELIKVFDIDLSWRLHKVSDGQRRRVQICMGLLRPYKVLLLDE
ITVDLDVLARADLLMFLKKECEDRGATIIYATHIFDGLENWPSHIVYVAKGKLQLSMPMD
KVKETYKLSLMRTVESWLRKEREEERATRKERKARGLPEFEEQIEGSRVVVNNGWGAGRL
NSTVAGEENFVLSSNRVLRQ
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtcaagcaagattccaccgaaccaacgatcgtgatcaaccgcctcaaattcacc
taccccggaatcaacggccacccgccccccggcgccaagcccctcatcgaagacttctcc
ctcaccctcaacgccggcgaccgatgcctcctcgtcggctccaacggcgccggcaagacc
accatcctcaagatcctcggcggcaagcacatggtcgatccctccatggtccgcgtcctc
ggccgctccgccttccacgacaccgccctcaccgtctccggcgacctctcctatctcggc
ggcgagtggcgccgcgacgtggcgtttgctgggtttgatgtgccgattcagatggatgtc
tcggctgagaaattgatcaatggggtggcggggattgacccaaatagaagagctgagctg
atcaaggtgtttgatatcgatctctcgtggcggttgcataaggtctccgacggtcagaga
agacgggttcagatctgtatggggcttctcagaccgtataaggtgcttctgctcgatgag
atcacggtggaccttgacgtcctggcgagggcggacctgctcatgttcttgaagaaggaa
tgcgaggaccgaggtgctacgatcatttacgcgacacatatatttgatggattggagaat
tggccgtcacacattgtgtatgttgctaaagggaagctgcagttgtcaatgccaatggac
aaggttaaggagacgtacaagctgtcccttatgaggacggtcgagagttggctgaggaag
gagcgcgaagaggagagggcgacaaggaaagagaggaaggcaagaggtcttcccgagttt
gaagaacaaattgaggggagccgagtagtggttaacaatggttggggagctgggcgcctc
aactccactgttgctggagaagagaactttgtgttgagctcgaacagagttctcaggcaa
tag
DBGET
integrated database retrieval system
