Aggregatibacter aphrophilus NJ8700: NT05HA_2331
Help
Entry
NT05HA_2331 CDS
T00929
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
aap
Aggregatibacter aphrophilus NJ8700
Pathway
aap03030
DNA replication
aap03410
Base excision repair
aap03420
Nucleotide excision repair
aap03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NT05HA_2331
03410 Base excision repair
NT05HA_2331
03420 Nucleotide excision repair
NT05HA_2331
03430 Mismatch repair
NT05HA_2331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aap03032
]
NT05HA_2331
03400 DNA repair and recombination proteins [BR:
aap03400
]
NT05HA_2331
Enzymes [BR:
aap01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
NT05HA_2331
DNA replication proteins [BR:
aap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NT05HA_2331
DNA repair and recombination proteins [BR:
aap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
NT05HA_2331
NER (nucleotide excision repair)
GGR (global genome repair) factors
NT05HA_2331
MMR (mismatch excision repair)
DNA ligase
NT05HA_2331
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NT05HA_2331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
HHH_5
BRCT
DNA_ligase_ZBD
HHH
PTCB-BRCT
Nlig-Ia
HHH_3
DZR_2
Motif
Other DBs
NCBI-ProteinID:
ACS98634
LinkDB
All DBs
Position
complement(2269705..2271720)
Genome browser
AA seq
671 aa
AA seq
DB search
MTTSIQQQIDDLRKTLRYHEYQYHVLDEPQIPDSEYDRLFHQLKALEQQHPALITADSPT
QRVGARPLSEFAQIKHELPMLSLDNAFSDEEFLAFVKRIQDRLVFAPEPLTFCCEPKLDG
LAVSILYVNGVLTQAATRGDGTTGEDITQNIRTIRNIPLQLLTDNPPARLEVRGEVFMPH
DGFERLNERALEQGEKTFANPRNAAAGSLRQLDPKITSQRPLVFNAYSIGVAQRIDLPPT
HFERLQWLKSIGVPVNSEIRLCDGIENVLNFYRTMMEKRSSLGYDIDGTVLKVNDIELQQ
RLGFISKAPRWAIAYKFPAQEELTVLNDVEFQVGRTGAITPVAKLQPVFVAGVTVSNATL
HNGDEIERLNIAIGDTVIIRRAGDVIPQIIGVVHDRRPANARQIVFPTHCPVCDSLIVRI
EGEAVARCTGGLFCAAQRKEALKHFVSRKAMNIDGVGAKLIEQLVDRELVHTPADLFKLD
LTTITRLERMGPKSAENALASLEKAKHTTLARFIFALGIRDVGEAIALNLANHFKTLEAL
QNADLEQLQQVPDVGEVVANRIFVFWREEHNVAVVNDLIAQGVHWETVEVQEVKENPFKD
KTVVLTGTLSQMGRNDAKVLLQQLGAKVSGSVSAKTDYVIAGEAAGSKLSKAAELGVQVL
SEEEFWAWVNG
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgacaacttcaattcaacaacaaattgacgacctcagaaaaaccctgcgttatcacgaa
tatcaatatcatgtgttagacgagccgcagattcccgacagtgaatacgatcgtttgttt
catcagctcaaagccttagaacaacaacatcccgcgctgatcaccgccgattcgccgacc
caacgcgtgggcgcgcggccgttgtcggaatttgcgcaaattaaacatgaacttccgatg
ctctcgttggataatgccttttctgatgaggaatttttggcgtttgtgaaacgcattcag
gatcgcttggttttcgcgcccgaaccattgacattttgttgcgaacctaaattggacgga
ttggcagtcagtattttgtatgtgaatggtgtgctgacccaagcagcaacgcgcggcgat
ggcacaacgggcgaagacattacgcaaaacattcgtaccattcgcaacattcccttgcag
ctactgacagataatccgccggcacgcttggaagtgcgtggcgaagtgtttatgccgcac
gatggtttcgagcgcttaaacgagcgcgccttggaacagggcgaaaaaacctttgctaat
ccgcgtaatgcggcggcaggttccttacgccaattggatccgaaaatcaccagtcagcgc
ccgctcgtgttcaatgcttacagcatcggcgtcgcccaaaggatagacttaccgcctact
cattttgaacgcctacaatggttgaaatccatcggcgtgccggtaaatagcgagatccgt
ttatgcgatggcattgaaaacgtgctgaatttctaccgcactatgatggaaaaacgcagt
tccttgggttatgacattgacggcacggtattaaaagtcaatgacatcgaattacaacaa
agactgggctttatttccaaagcaccgcgttgggcaatcgcttacaaattccctgcccaa
gaggaactgacggtattaaatgacgtggaattccaagtcggtcgaaccggtgccatcacg
cctgtggctaaactacaaccggtattcgttgccggtgtaaccgtcagtaacgcaacctta
cataacggcgacgagatcgagcgtctcaacattgctatcggcgacacggtgattattcgt
cgcgccggcgatgtgattccacaaattattggcgtcgtacacgatcgccgcccagccaac
gcgcgccaaattgtctttccgacgcattgtccggtatgcgattccttaattgttcgcatt
gaaggcgaagcggtggcacgttgcaccggcgggttattctgtgcggcacaacgcaaagaa
gcgctaaaacatttcgtctcacgcaaagccatgaacattgacggtgtaggtgccaaactg
attgagcaactggtggatcgcgaattggttcataccccggcagatttgttcaagttggat
ttaaccacaatcacccgcttagaacgcatggggccgaaatcggctgaaaatgcgttagcc
agcttagaaaaagccaaacacacgaccctcgcccgttttatctttgcgttgggtattcgt
gatgtgggtgaagccatcgcattaaatctggcaaaccatttcaaaaccttagaagcctta
caaaatgccgatttagaacagctacaacaagtgcctgatgtgggcgaggtggtcgcgaat
cgcatttttgtgttctggcgtgaagaacataatgttgcggtggtgaatgacctcatcgcc
cagggtgtacattgggaaactgttgaagtacaggaagtgaaagaaaatccgttcaaagac
aaaaccgtggtgctcaccggcacactttcccaaatgggacgcaatgacgccaaagtgctg
ttacaacaactcggtgccaaagtcagcggcagtgtttcagccaaaaccgactatgttatc
gccggtgaagcggcaggttccaaactcagcaaagcagcagaattaggcgtgcaggtgttg
agtgaggaggagttttgggcgtgggttaatggataa
DBGET
integrated database retrieval system
