Actinobacillus arthritidis: NYR89_01550
Help
Entry
NYR89_01550 CDS
T09025
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
aart
Actinobacillus arthritidis
Brite
KEGG Orthology (KO) [BR:
aart00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aart03009
]
NYR89_01550 (rlmC)
Enzymes [BR:
aart01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
NYR89_01550 (rlmC)
Ribosome biogenesis [BR:
aart03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NYR89_01550 (rlmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_12
Methyltransf_32
Methyltransf_4
MptE-like
Methyltransf_15
TrkA_N
UPF0020
DUF1786
Motif
Other DBs
NCBI-ProteinID:
WGE89655
LinkDB
All DBs
Position
complement(302319..303491)
Genome browser
AA seq
390 aa
AA seq
DB search
MILNCPHFQQQHCVSCQWLEKPYSTRLMDKEADLKRLISPFILQNFTNILPPVQSSQKQF
RNKAKMVISGSVERPILGILKDQTDPQSGIDLCNCPLYPTEFEVLFPILKDFIARAGLVP
YNISKKKGELKYILITQSQYNRSVMLRFVLRSEQKRPLVERELPNLLAKSPEDSVVSLNI
QPQHAAILEGETEIFLTEKTTLEENFNHIPLFIRPQGFFQTNPNVASQLYATAQNWIKDL
PIQQFWDLFCGVGGFGLHCAKTLQEKNENVHLTGIEISASAIASAMKSAEQLQLKNVIFA
SLDSAQFALNEKGVTPDLVIVNPPRRGIGKSLAEFLNQLGSPYLIYSSCNAQTMVKDFEV
LSNYSLQKVQLFDMFPHTSHYEVLTFLVKK
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgatactaaactgcccccattttcaacagcaacattgtgtttcatgccaatggttagaa
aaaccgtattctacgcgacttatggataaagaagccgatcttaagcggttaatttcgccc
tttattttgcaaaatttcactaacatcttaccgcctgttcaatcttcacaaaaacagttt
cgtaataaagcgaaaatggtaatttccggtagtgtcgaacgtccgattttaggcatttta
aaagatcaaaccgatccacaaagtggcattgatctatgtaattgtccgctctatccgact
gaatttgaagtgctttttccgattcttaaagattttatcgcccgagccggactcgtacct
tataacatctcaaaaaagaaaggcgaattgaagtatattttgatcacgcaaagccaatat
aaccgatccgttatgttacgttttgtattaagaagtgaacaaaaaagaccgcttgttgaa
cgtgaattaccaaatttattagctaagtcgccggaagattctgtggttagcttaaatatc
caaccacaacatgcggcaattttagaaggtgagaccgaaatctttctcacagaaaaaacc
acgctcgaagaaaattttaaccatattccgttatttattcgtccgcagggctttttccaa
accaatccgaatgtcgctagtcaactttatgcaactgcacaaaactggataaaagattta
ccgatccaacaattttgggatcttttctgcggtgttggaggctttggtttacattgtgcc
aaaacgctacaagagaagaatgaaaatgtacacttaaccggtattgaaatttctgcttca
gcgatcgccagtgcaatgaaatcagctgagcaattacaacttaaaaatgtgatattcgct
tcgcttgactcagcacaatttgcactaaatgagaaaggtgtaacaccggatctagtgatt
gttaatccacctcgccgtggtatcggcaaatcgcttgcagaatttttaaatcaattaggt
tcgccctatctcatttattccagctgtaatgcccaaactatggttaaagattttgaagta
ttaagcaattattcactccaaaaggtgcaattattcgatatgtttccacatacatcacat
tatgaagtgctaacatttttagtgaaaaaataa
DBGET
integrated database retrieval system
