KEGG   Paracidovorax citrulli: Aave_1562
Entry
Aave_1562         CDS       T00451                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
aav  Paracidovorax citrulli
Pathway
aav03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:aav00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Aave_1562
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aav03400]
    Aave_1562
Enzymes [BR:aav01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Aave_1562
DNA repair and recombination proteins [BR:aav03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Aave_1562
 Prokaryotic type
     Aave_1562
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S RecR_HhH HHH_8 HHH_5 Ogg-HhH
Other DBs
NCBI-ProteinID: ABM32151
UniProt: A1TMG3
LinkDB
Position
complement(1728562..1729242)
AA seq 226 aa
MHGRTASTTTPHTTMKTAQIEPFFAALKAANPQPNTELEYTTVFELLAAVLLSAQATDVG
VNKATRKLFPVAGTPQAILDLGLEGLEGYIKTIGLYRSKARHLMETCRILVERHGGTVPR
TREELEALPGVGRKTANVVLNVAFGQPTMAVDTHIFRVSNRTGLAPGKNPLAVEMQLLKR
VPAEYAVDSHHWLILLGRYVCQARKPRCWECVVAPWCDYQPKTPAP
NT seq 681 nt   +upstreamnt  +downstreamnt
atgcacgggcgaaccgcatcgacaacgacgccccacaccaccatgaagaccgcgcagatc
gaacccttcttcgccgcgctgaaggccgccaatccccaacccaacaccgaactggaatac
accaccgtcttcgagctgctggccgccgtgctgttgtcggcccaggccaccgacgtgggc
gtgaacaaggccacgcgcaagctgttcccggtggcgggcacgccgcaggccatcctcgac
ctggggctggaagggctggagggctacatcaagaccattggcctgtaccgcagcaaggcc
cgccacctgatggagacgtgccgcatcctggtggagcgccacggcggcaccgtgccgcgc
acgcgcgaggaactggaagccctgcccggcgtgggccgcaagaccgccaacgtggtgctg
aacgtggccttcggccagcccaccatggcggtggacacgcacatcttccgcgtgagcaac
cgcaccggcctcgcccccggcaagaacccgctggccgtggaaatgcagctgctcaaacgc
gtgcccgccgaatatgccgtggattcgcaccactggctcatcctgctgggccgctacgtc
tgccaggcgagaaagccgcgctgctgggaatgcgtggtggcgccgtggtgcgattaccag
ccgaagacgccggcgccctga

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